RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 POLR3BQ9NW08 1133 aaPredicted RBP15.27■□□□□ 0.04
CHMP1A-210ENST00000551981 STYXL1Q9Y6J8 313 aa15.27■□□□□ 0.04
CHMP1A-210ENST00000551981 ASPMQ8IZT6 3477 aa15.27■□□□□ 0.03
CHMP1A-210ENST00000551981 NUP205Q92621 2012 aa15.26■□□□□ 0.03
CHMP1A-210ENST00000551981 TRAV19A0A0A6YYK7 116 aa15.26■□□□□ 0.03
CHMP1A-210ENST00000551981 BCLAF3A2AJT9 711 aaKnown RBP15.26■□□□□ 0.03
CHMP1A-210ENST00000551981 DCLK1O15075 740 aa15.26■□□□□ 0.03
CHMP1A-210ENST00000551981 HUS1O60921 280 aa15.26■□□□□ 0.03
CHMP1A-210ENST00000551981 NOL4O94818 638 aa15.26■□□□□ 0.03
CHMP1A-210ENST00000551981 CKMP06732 381 aa15.26■□□□□ 0.03
CHMP1A-210ENST00000551981 GPR15P49685 360 aa15.26■□□□□ 0.03
CHMP1A-210ENST00000551981 DGKEP52429 567 aa15.26■□□□□ 0.03
CHMP1A-210ENST00000551981 MYL7Q01449 175 aa15.26■□□□□ 0.03
CHMP1A-210ENST00000551981 MCM6Q14566 821 aa15.26■□□□□ 0.03
CHMP1A-210ENST00000551981 POSTNQ15063 836 aa15.26■□□□□ 0.03
CHMP1A-210ENST00000551981 ZC2HC1CQ53FD0 456 aaPredicted RBP15.26■□□□□ 0.03
CHMP1A-210ENST00000551981 EFCAB13Q8IY85 973 aa15.26■□□□□ 0.03
CHMP1A-210ENST00000551981 FSIP1Q8NA03 581 aa15.26■□□□□ 0.03
CHMP1A-210ENST00000551981 TSTD1Q8NFU3 115 aa15.26■□□□□ 0.03
CHMP1A-210ENST00000551981 RIN3Q8TB24 985 aa15.26■□□□□ 0.03
CHMP1A-210ENST00000551981 POMGNT1Q8WZA1 660 aa15.26■□□□□ 0.03
CHMP1A-210ENST00000551981 ACBD6Q9BR61 282 aa15.26■□□□□ 0.03
CHMP1A-210ENST00000551981 ST6GALNAC4Q9H4F1 302 aa15.26■□□□□ 0.03
CHMP1A-210ENST00000551981 TMLHEQ9NVH6 421 aa15.26■□□□□ 0.03
CHMP1A-210ENST00000551981 C4orf47A7E2U8 309 aa15.25■□□□□ 0.03
CHMP1A-210ENST00000551981 TISP43B9A030 160 aa15.25■□□□□ 0.03
CHMP1A-210ENST00000551981 TULP1O00294 542 aaPredicted RBP15.25■□□□□ 0.03
CHMP1A-210ENST00000551981 PLCG1P19174 1290 aa15.25■□□□□ 0.03
CHMP1A-210ENST00000551981 USP4Q13107 963 aa15.25■□□□□ 0.03
CHMP1A-210ENST00000551981 ZNF77Q15935 545 aa15.25■□□□□ 0.03
CHMP1A-210ENST00000551981 DDR2Q16832 855 aa15.25■□□□□ 0.03
CHMP1A-210ENST00000551981 USP39Q53GS9 565 aaKnown RBP15.25■□□□□ 0.03
CHMP1A-210ENST00000551981 SDHAF4Q5VUM1 108 aa15.25■□□□□ 0.03
CHMP1A-210ENST00000551981 NAIF1Q69YI7 327 aaPredicted RBP15.25■□□□□ 0.03
CHMP1A-210ENST00000551981 TMEM86AQ8N2M4 240 aa15.25■□□□□ 0.03
CHMP1A-210ENST00000551981 PDCL2Q8N4E4 241 aa15.25■□□□□ 0.03
CHMP1A-210ENST00000551981 KRI1Q8N9T8 703 aaKnown RBP15.25■□□□□ 0.03
CHMP1A-210ENST00000551981 STKLD1Q8NE28 680 aa15.25■□□□□ 0.03
CHMP1A-210ENST00000551981 LARP4BQ92615 738 aaKnown RBP15.25■□□□□ 0.03
CHMP1A-210ENST00000551981 HVCN1Q96D96 273 aa15.25■□□□□ 0.03
CHMP1A-210ENST00000551981 MYRFLQ96LU7 910 aa15.25■□□□□ 0.03
CHMP1A-210ENST00000551981 FIZ1Q96SL8 496 aa15.25■□□□□ 0.03
CHMP1A-210ENST00000551981 BLOC1S4Q9NUP1 217 aa15.25■□□□□ 0.03
CHMP1A-210ENST00000551981 DDX43Q9NXZ2 648 aaKnown RBP15.25■□□□□ 0.03
CHMP1A-210ENST00000551981 WNT6Q9Y6F9 365 aa15.25■□□□□ 0.03
CHMP1A-210ENST00000551981 ZZEF1O43149 2961 aa15.24■□□□□ 0.03
CHMP1A-210ENST00000551981 IGF2RP11717 2491 aa15.24■□□□□ 0.03
CHMP1A-210ENST00000551981 THADAQ6YHU6 1953 aa15.24■□□□□ 0.03
CHMP1A-210ENST00000551981 HELZP42694 1942 aaKnown RBP15.24■□□□□ 0.03
CHMP1A-210ENST00000551981 KHNYNO15037 678 aaKnown RBP15.24■□□□□ 0.03
CHMP1A-210ENST00000551981 BMP15O95972 392 aa15.24■□□□□ 0.03
CHMP1A-210ENST00000551981 CYP2F1P24903 491 aa15.24■□□□□ 0.03
CHMP1A-210ENST00000551981 LONP1P36776 959 aaKnown RBP15.24■□□□□ 0.03
CHMP1A-210ENST00000551981 PDE6CP51160 858 aa15.24■□□□□ 0.03
CHMP1A-210ENST00000551981 TFAMQ00059 246 aaKnown RBP15.24■□□□□ 0.03
CHMP1A-210ENST00000551981 ZNF252P-AS1Q0IIN9 211 aa15.24■□□□□ 0.03
CHMP1A-210ENST00000551981 KCNB1Q14721 858 aa15.24■□□□□ 0.03
CHMP1A-210ENST00000551981 EML3Q32P44 896 aa15.24■□□□□ 0.03
CHMP1A-210ENST00000551981 INTS6LQ5JSJ4 861 aaKnown RBP15.24■□□□□ 0.03
CHMP1A-210ENST00000551981 UNQ6494/PRO21346Q6UXR6 183 aa15.24■□□□□ 0.03
CHMP1A-210ENST00000551981 SPATA2LQ8IUW3 424 aaPredicted RBP15.24■□□□□ 0.03
CHMP1A-210ENST00000551981 LRRC15Q8TF66 581 aa15.24■□□□□ 0.03
CHMP1A-210ENST00000551981 CACTINQ8WUQ7 758 aaKnown RBP15.24■□□□□ 0.03
CHMP1A-210ENST00000551981 TMEM9BQ9NQ34 198 aa15.24■□□□□ 0.03
CHMP1A-210ENST00000551981 PPP4R2Q9NY27 417 aa15.24■□□□□ 0.03
CHMP1A-210ENST00000551981 L1RE1Q9UN81 338 aa15.24■□□□□ 0.03
CHMP1A-210ENST00000551981 AGAP1Q9UPQ3 857 aa15.24■□□□□ 0.03
CHMP1A-210ENST00000551981 EXOC7Q9UPT5 735 aa15.24■□□□□ 0.03
CHMP1A-210ENST00000551981 ANAPC1Q9H1A4 1944 aa15.23■□□□□ 0.03
CHMP1A-210ENST00000551981 LNP1A1A4G5 178 aa15.23■□□□□ 0.03
CHMP1A-210ENST00000551981 TADA3O75528 432 aa15.23■□□□□ 0.03
CHMP1A-210ENST00000551981 NFATC1O95644 943 aa15.23■□□□□ 0.03
CHMP1A-210ENST00000551981 ITGB3P05106 788 aa15.23■□□□□ 0.03
CHMP1A-210ENST00000551981 POLR2BP30876 1174 aaKnown RBP15.23■□□□□ 0.03
CHMP1A-210ENST00000551981 CFAP221Q4G0U5 840 aa15.23■□□□□ 0.03
CHMP1A-210ENST00000551981 SH3PXD2AQ5TCZ1 1133 aa15.23■□□□□ 0.03
CHMP1A-210ENST00000551981 PMS2CLQ68D20 193 aa15.23■□□□□ 0.03
CHMP1A-210ENST00000551981 CRELD2Q6UXH1 353 aaPredicted RBP15.23■□□□□ 0.03
CHMP1A-210ENST00000551981 ZNF720Q7Z2F6 126 aa15.23■□□□□ 0.03
CHMP1A-210ENST00000551981 CYP2U1Q7Z449 544 aa15.23■□□□□ 0.03
CHMP1A-210ENST00000551981 LRRC52Q8N7C0 313 aa15.23■□□□□ 0.03
CHMP1A-210ENST00000551981 SPATA18Q8TC71 538 aa15.23■□□□□ 0.03
CHMP1A-210ENST00000551981 SH3RF2Q8TEC5 729 aa15.23■□□□□ 0.03
CHMP1A-210ENST00000551981 EZH1Q92800 747 aaPredicted RBP15.23■□□□□ 0.03
CHMP1A-210ENST00000551981 FUBP3Q96I24 572 aaKnown RBP eCLIP15.23■□□□□ 0.03
CHMP1A-210ENST00000551981 CYP2S1Q96SQ9 504 aa15.23■□□□□ 0.03
CHMP1A-210ENST00000551981 ATRXP46100 2492 aa15.23■□□□□ 0.03
CHMP1A-210ENST00000551981 ABCA7Q8IZY2 2146 aa15.22■□□□□ 0.03
CHMP1A-210ENST00000551981 ACAT1P24752 427 aaKnown RBP15.22■□□□□ 0.03
CHMP1A-210ENST00000551981 PCSK1P29120 753 aa15.22■□□□□ 0.03
CHMP1A-210ENST00000551981 LHX1P48742 406 aa15.22■□□□□ 0.03
CHMP1A-210ENST00000551981 FOXC1Q12948 553 aa15.22■□□□□ 0.03
CHMP1A-210ENST00000551981 BRSK2Q8IWQ3 736 aa15.22■□□□□ 0.03
CHMP1A-210ENST00000551981 SCN4BQ8IWT1 228 aa15.22■□□□□ 0.03
CHMP1A-210ENST00000551981 SLC22A12Q96S37 553 aa15.22■□□□□ 0.03
CHMP1A-210ENST00000551981 KIF2CQ99661 725 aa15.22■□□□□ 0.03
CHMP1A-210ENST00000551981 FAM213AQ9BRX8 229 aa15.22■□□□□ 0.03
CHMP1A-210ENST00000551981 TPSD1Q9BZJ3 242 aa15.22■□□□□ 0.03
CHMP1A-210ENST00000551981 GTF3C4Q9UKN8 822 aa15.22■□□□□ 0.03
CHMP1A-210ENST00000551981 ITGA11Q9UKX5 1188 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms