RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 LEMD2Q8NC56 503 aa18.49■□□□□ 0.55
CDK4-208ENST00000551706 ACSF2Q96CM8 615 aaPredicted RBP18.49■□□□□ 0.55
CDK4-208ENST00000551706 FUBP3Q96I24 572 aaKnown RBP eCLIP18.49■□□□□ 0.55
CDK4-208ENST00000551706 TNIP3Q96KP6 325 aa18.49■□□□□ 0.55
CDK4-208ENST00000551706 ZNF512Q96ME7 567 aaPredicted RBP18.49■□□□□ 0.55
CDK4-208ENST00000551706 PKMYT1Q99640 499 aa18.49■□□□□ 0.55
CDK4-208ENST00000551706 DNAI2Q9GZS0 605 aa18.49■□□□□ 0.55
CDK4-208ENST00000551706 CRISPLD1Q9H336 500 aa18.49■□□□□ 0.55
CDK4-208ENST00000551706 THAP9Q9H5L6 903 aa18.49■□□□□ 0.55
CDK4-208ENST00000551706 AVENQ9NQS1 362 aaPredicted RBP18.49■□□□□ 0.55
CDK4-208ENST00000551706 TMEM63CQ9P1W3 806 aa18.49■□□□□ 0.55
CDK4-208ENST00000551706 GTF3C4Q9UKN8 822 aa18.49■□□□□ 0.55
CDK4-208ENST00000551706 SLC27A5Q9Y2P5 690 aa18.49■□□□□ 0.55
CDK4-208ENST00000551706 ASB3Q9Y575 518 aa18.49■□□□□ 0.55
CDK4-208ENST00000551706 MYO10Q9HD67 2058 aa18.49■□□□□ 0.55
CDK4-208ENST00000551706 PDGFRBP09619 1106 aa18.48■□□□□ 0.55
CDK4-208ENST00000551706 ASPAP45381 313 aa18.48■□□□□ 0.55
CDK4-208ENST00000551706 CDH8P55286 799 aa18.48■□□□□ 0.55
CDK4-208ENST00000551706 VEPH1Q14D04 833 aa18.48■□□□□ 0.55
CDK4-208ENST00000551706 KLHL40Q2TBA0 621 aa18.48■□□□□ 0.55
CDK4-208ENST00000551706 CFAP221Q4G0U5 840 aa18.48■□□□□ 0.55
CDK4-208ENST00000551706 PABPC1LQ4VXU2 614 aaKnown RBP18.48■□□□□ 0.55
CDK4-208ENST00000551706 UNC93AQ86WB7 457 aa18.48■□□□□ 0.55
CDK4-208ENST00000551706 PLCD3Q8N3E9 789 aa18.48■□□□□ 0.55
CDK4-208ENST00000551706 TTC39CQ8N584 583 aa18.48■□□□□ 0.55
CDK4-208ENST00000551706 TDRD5Q8NAT2 981 aaKnown RBP18.48■□□□□ 0.55
CDK4-208ENST00000551706 FEZF2Q8TBJ5 459 aa18.48■□□□□ 0.55
CDK4-208ENST00000551706 MYCBPAPQ8TBZ2 947 aa18.48■□□□□ 0.55
CDK4-208ENST00000551706 SEMA4DQ92854 862 aa18.48■□□□□ 0.55
CDK4-208ENST00000551706 CNOT6LQ96LI5 555 aaKnown RBP18.48■□□□□ 0.55
CDK4-208ENST00000551706 SEPT5Q99719 369 aaPredicted RBP18.48■□□□□ 0.55
CDK4-208ENST00000551706 BCO2Q9BYV7 579 aa18.48■□□□□ 0.55
CDK4-208ENST00000551706 SMOC2Q9H3U7 446 aa18.48■□□□□ 0.55
CDK4-208ENST00000551706 FAM124BQ9H5Z6 455 aaPredicted RBP18.48■□□□□ 0.55
CDK4-208ENST00000551706 APOBEC3GQ9HC16 384 aaKnown RBP18.48■□□□□ 0.55
CDK4-208ENST00000551706 TMLHEQ9NVH6 421 aa18.48■□□□□ 0.55
CDK4-208ENST00000551706 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.48■□□□□ 0.55
CDK4-208ENST00000551706 MYBPHLA2RUH7 354 aa18.47■□□□□ 0.55
CDK4-208ENST00000551706 C2CD4DB7Z1M9 353 aa18.47■□□□□ 0.55
CDK4-208ENST00000551706 HCRTO43612 131 aa18.47■□□□□ 0.55
CDK4-208ENST00000551706 AFPP02771 609 aaKnown RBP18.47■□□□□ 0.55
CDK4-208ENST00000551706 HAPLN1P10915 354 aaPredicted RBP18.47■□□□□ 0.55
CDK4-208ENST00000551706 PTPN1P18031 435 aaKnown RBP18.47■□□□□ 0.55
CDK4-208ENST00000551706 FSHRP23945 695 aa18.47■□□□□ 0.55
CDK4-208ENST00000551706 RAP1GAPP47736 663 aa18.47■□□□□ 0.55
CDK4-208ENST00000551706 PSMC1P62191 440 aaKnown RBP18.47■□□□□ 0.55
CDK4-208ENST00000551706 KCNH2Q12809 1159 aa18.47■□□□□ 0.55
CDK4-208ENST00000551706 CAVIN1Q6NZI2 390 aaKnown RBP18.47■□□□□ 0.55
CDK4-208ENST00000551706 ITIH5Q86UX2 942 aa18.47■□□□□ 0.55
CDK4-208ENST00000551706 B3GALNT2Q8NCR0 500 aa18.47■□□□□ 0.55
CDK4-208ENST00000551706 ELMO3Q96BJ8 720 aa18.47■□□□□ 0.55
CDK4-208ENST00000551706 SDCBP2Q9H190 292 aa18.47■□□□□ 0.55
CDK4-208ENST00000551706 CRTAC1Q9NQ79 661 aa18.47■□□□□ 0.55
CDK4-208ENST00000551706 DNMT3BQ9UBC3 853 aaKnown RBP18.47■□□□□ 0.55
CDK4-208ENST00000551706 MAGEC2Q9UBF1 373 aaPredicted RBP18.47■□□□□ 0.55
CDK4-208ENST00000551706 ZFP37Q9Y6Q3 630 aaPredicted RBP18.47■□□□□ 0.55
CDK4-208ENST00000551706 ZNF197O14709 1029 aa18.46■□□□□ 0.55
CDK4-208ENST00000551706 ATP2C2O75185 946 aa18.46■□□□□ 0.55
CDK4-208ENST00000551706 LETM1O95202 739 aaPredicted RBP18.46■□□□□ 0.55
CDK4-208ENST00000551706 RHOP08100 348 aa18.46■□□□□ 0.55
CDK4-208ENST00000551706 RPL10AP62906 217 aaKnown RBP18.46■□□□□ 0.55
CDK4-208ENST00000551706 INCA1Q0VD86 236 aa18.46■□□□□ 0.55
CDK4-208ENST00000551706 CYP4A22Q5TCH4 519 aa18.46■□□□□ 0.55
CDK4-208ENST00000551706 VSTM1Q6UX27 236 aa18.46■□□□□ 0.55
CDK4-208ENST00000551706 CREBRFQ8IUR6 639 aa18.46■□□□□ 0.55
CDK4-208ENST00000551706 ZDHHC14Q8IZN3 488 aa18.46■□□□□ 0.55
CDK4-208ENST00000551706 TTC9BQ8N6N2 239 aa18.46■□□□□ 0.55
CDK4-208ENST00000551706 ENOX1Q8TC92 643 aaKnown RBP18.46■□□□□ 0.55
CDK4-208ENST00000551706 MYLPFQ96A32 169 aa18.46■□□□□ 0.55
CDK4-208ENST00000551706 CORO1BQ9BR76 489 aa18.46■□□□□ 0.55
CDK4-208ENST00000551706 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.46■□□□□ 0.55
CDK4-208ENST00000551706 ASAH2Q9NR71 780 aa18.46■□□□□ 0.55
CDK4-208ENST00000551706 HCFC1R1Q9NWW0 138 aa18.46■□□□□ 0.55
CDK4-208ENST00000551706 CEP72Q9P209 647 aa18.46■□□□□ 0.55
CDK4-208ENST00000551706 MICAL2O94851 1124 aa18.45■□□□□ 0.54
CDK4-208ENST00000551706 PRKCSHP14314 528 aaPredicted RBP18.45■□□□□ 0.54
CDK4-208ENST00000551706 MAGEA11P43364 429 aa18.45■□□□□ 0.54
CDK4-208ENST00000551706 MTIF2P46199 727 aaKnown RBP18.45■□□□□ 0.54
CDK4-208ENST00000551706 NTHL1P78549 312 aa18.45■□□□□ 0.54
CDK4-208ENST00000551706 PUM1Q14671 1186 aaKnown RBP eCLIP18.45■□□□□ 0.54
CDK4-208ENST00000551706 ANGPT1Q15389 498 aa18.45■□□□□ 0.54
CDK4-208ENST00000551706 MDH1BQ5I0G3 518 aa18.45■□□□□ 0.54
CDK4-208ENST00000551706 PDZD4Q76G19 769 aaPredicted RBP18.45■□□□□ 0.54
CDK4-208ENST00000551706 GET4Q7L5D6 327 aaPredicted RBP18.45■□□□□ 0.54
CDK4-208ENST00000551706 IRF2BP1Q8IU81 584 aa18.45■□□□□ 0.54
CDK4-208ENST00000551706 FLCNQ8NFG4 579 aa18.45■□□□□ 0.54
CDK4-208ENST00000551706 FAM200AQ8TCP9 573 aa18.45■□□□□ 0.54
CDK4-208ENST00000551706 PSMG2Q969U7 264 aa18.45■□□□□ 0.54
CDK4-208ENST00000551706 PCED1BQ96HM7 432 aa18.45■□□□□ 0.54
CDK4-208ENST00000551706 CNTNAP3BQ96NU0 1288 aa18.45■□□□□ 0.54
CDK4-208ENST00000551706 CNTNAP3Q9BZ76 1288 aa18.45■□□□□ 0.54
CDK4-208ENST00000551706 MRPS23Q9Y3D9 190 aaKnown RBP18.45■□□□□ 0.54
CDK4-208ENST00000551706 NME7Q9Y5B8 376 aa18.45■□□□□ 0.54
CDK4-208ENST00000551706 FRYLO94915 3013 aa18.44■□□□□ 0.54
CDK4-208ENST00000551706 LRRN2O75325 713 aa18.44■□□□□ 0.54
CDK4-208ENST00000551706 FGF19O95750 216 aa18.44■□□□□ 0.54
CDK4-208ENST00000551706 LMNAP02545 664 aaKnown RBP18.44■□□□□ 0.54
CDK4-208ENST00000551706 ASGR2P07307 311 aa18.44■□□□□ 0.54
CDK4-208ENST00000551706 ATF6P18850 670 aa18.44■□□□□ 0.54
CDK4-208ENST00000551706 TBXAS1P24557 533 aaPredicted RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms