RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 ARVCFO00192 962 aa20.8■□□□□ 0.92
SSH1-209ENST00000551165 CYB561D2O14569 222 aa20.8■□□□□ 0.92
SSH1-209ENST00000551165 HUS1O60921 280 aa20.8■□□□□ 0.92
SSH1-209ENST00000551165 GLE1Q53GS7 698 aaKnown RBP20.8■□□□□ 0.92
SSH1-209ENST00000551165 UNC93AQ86WB7 457 aa20.8■□□□□ 0.92
SSH1-209ENST00000551165 SLC13A5Q86YT5 568 aaPredicted RBP20.8■□□□□ 0.92
SSH1-209ENST00000551165 ARFGAP1Q8N6T3 406 aa20.8■□□□□ 0.92
SSH1-209ENST00000551165 ACSF2Q96CM8 615 aaPredicted RBP20.8■□□□□ 0.92
SSH1-209ENST00000551165 SNX25Q9H3E2 840 aa20.8■□□□□ 0.92
SSH1-209ENST00000551165 PHF24Q9UPV7 400 aa20.8■□□□□ 0.92
SSH1-209ENST00000551165 INPP5FQ9Y2H2 1132 aa20.8■□□□□ 0.92
SSH1-209ENST00000551165 MKI67P46013 3256 aaKnown RBP20.8■□□□□ 0.92
SSH1-209ENST00000551165 A0A0U1RQG5 324 aaPredicted RBP20.79■□□□□ 0.92
SSH1-209ENST00000551165 SIGLEC16A6NMB1 481 aa20.79■□□□□ 0.92
SSH1-209ENST00000551165 CCDC188H7C350 402 aa20.79■□□□□ 0.92
SSH1-209ENST00000551165 ADORA2BP29275 332 aa20.79■□□□□ 0.92
SSH1-209ENST00000551165 GABRB2P47870 512 aa20.79■□□□□ 0.92
SSH1-209ENST00000551165 CARSP49589 748 aaKnown RBP20.79■□□□□ 0.92
SSH1-209ENST00000551165 ARHGEF6Q15052 776 aa20.79■□□□□ 0.92
SSH1-209ENST00000551165 SIX1Q15475 284 aaPredicted RBP20.79■□□□□ 0.92
SSH1-209ENST00000551165 PAN2Q504Q3 1202 aaKnown RBP20.79■□□□□ 0.92
SSH1-209ENST00000551165 HACE1Q8IYU2 909 aa20.79■□□□□ 0.92
SSH1-209ENST00000551165 LINC01599Q8WXQ3 324 aa20.79■□□□□ 0.92
SSH1-209ENST00000551165 TRAIPQ9BWF2 469 aa20.79■□□□□ 0.92
SSH1-209ENST00000551165 RSAD1Q9HA92 442 aa20.79■□□□□ 0.92
SSH1-209ENST00000551165 PODXLO00592 558 aa20.79■□□□□ 0.92
SSH1-209ENST00000551165 TTI1O43156 1089 aa20.79■□□□□ 0.92
SSH1-209ENST00000551165 PRMT2P55345 433 aa20.79■□□□□ 0.92
SSH1-209ENST00000551165 PDE4CQ08493 712 aa20.79■□□□□ 0.92
SSH1-209ENST00000551165 TAF5Q15542 800 aa20.79■□□□□ 0.92
SSH1-209ENST00000551165 KIAA0319Q5VV43 1072 aa20.79■□□□□ 0.92
SSH1-209ENST00000551165 TRNP1Q6NT89 227 aa20.79■□□□□ 0.92
SSH1-209ENST00000551165 CASKIN2Q8WXE0 1202 aa20.79■□□□□ 0.92
SSH1-209ENST00000551165 MCRS1Q96EZ8 462 aa20.79■□□□□ 0.92
SSH1-209ENST00000551165 I3L4J1 428 aa20.78■□□□□ 0.92
SSH1-209ENST00000551165 ERLIN1O75477 346 aa20.78■□□□□ 0.92
SSH1-209ENST00000551165 TUBBP07437 444 aa20.78■□□□□ 0.92
SSH1-209ENST00000551165 RARAP10276 462 aa20.78■□□□□ 0.92
SSH1-209ENST00000551165 TKTP29401 623 aaKnown RBP20.78■□□□□ 0.92
SSH1-209ENST00000551165 FAM183BPQ6ZVS7 135 aa20.78■□□□□ 0.92
SSH1-209ENST00000551165 RHOT1Q8IXI2 618 aa20.78■□□□□ 0.92
SSH1-209ENST00000551165 CRYBG2Q8N1P7 616 aa20.78■□□□□ 0.92
SSH1-209ENST00000551165 SENP8Q96LD8 212 aa20.78■□□□□ 0.92
SSH1-209ENST00000551165 DEFB118Q96PH6 123 aa20.78■□□□□ 0.92
SSH1-209ENST00000551165 GDF3Q9NR23 364 aa20.78■□□□□ 0.92
SSH1-209ENST00000551165 SLC38A7Q9NVC3 462 aa20.78■□□□□ 0.92
SSH1-209ENST00000551165 KBTBD13C9JR72 458 aa20.78■□□□□ 0.92
SSH1-209ENST00000551165 GRAP2O75791 330 aa20.78■□□□□ 0.92
SSH1-209ENST00000551165 ZNF268Q14587 947 aaPredicted RBP20.78■□□□□ 0.92
SSH1-209ENST00000551165 RAB6CQ53S08 254 aa20.78■□□□□ 0.92
SSH1-209ENST00000551165 TTC27Q6P3X3 843 aa20.78■□□□□ 0.92
SSH1-209ENST00000551165 DDX42Q86XP3 938 aaKnown RBP eCLIP20.78■□□□□ 0.92
SSH1-209ENST00000551165 ECHDC2Q86YB7 292 aa20.78■□□□□ 0.92
SSH1-209ENST00000551165 SLC35F5Q8WV83 523 aa20.78■□□□□ 0.92
SSH1-209ENST00000551165 IFT81Q8WYA0 676 aa20.78■□□□□ 0.92
SSH1-209ENST00000551165 HEMGNQ9BXL5 484 aa20.78■□□□□ 0.92
SSH1-209ENST00000551165 B3GNT5Q9BYG0 378 aa20.78■□□□□ 0.92
SSH1-209ENST00000551165 RAB6CQ9H0N0 254 aa20.78■□□□□ 0.92
SSH1-209ENST00000551165 F8W810 466 aa20.77■□□□□ 0.92
SSH1-209ENST00000551165 PI4K2BG5E9Z4 385 aa20.77■□□□□ 0.92
SSH1-209ENST00000551165 MAN1A1P33908 653 aa20.77■□□□□ 0.92
SSH1-209ENST00000551165 FAM102AQ5T9C2 384 aaPredicted RBP20.77■□□□□ 0.92
SSH1-209ENST00000551165 ZNF598Q86UK7 904 aaKnown RBP20.77■□□□□ 0.92
SSH1-209ENST00000551165 SLC2A14Q8TDB8 520 aa20.77■□□□□ 0.92
SSH1-209ENST00000551165 PSMA2P25787 234 aa20.77■□□□□ 0.91
SSH1-209ENST00000551165 CDK7P50613 346 aa20.77■□□□□ 0.91
SSH1-209ENST00000551165 RAB27AP51159 221 aa20.77■□□□□ 0.91
SSH1-209ENST00000551165 UPP1Q16831 310 aa20.77■□□□□ 0.91
SSH1-209ENST00000551165 ARHGAP17Q68EM7 881 aa20.77■□□□□ 0.91
SSH1-209ENST00000551165 OR6B2Q6IFH4 312 aa20.77■□□□□ 0.91
SSH1-209ENST00000551165 SCUBE3Q8IX30 993 aa20.77■□□□□ 0.91
SSH1-209ENST00000551165 TOP6BLQ8N6T0 577 aa20.77■□□□□ 0.91
SSH1-209ENST00000551165 HASPINQ8TF76 798 aa20.77■□□□□ 0.91
SSH1-209ENST00000551165 RNF25Q96BH1 459 aaPredicted RBP20.77■□□□□ 0.91
SSH1-209ENST00000551165 NAP1L3Q99457 506 aaPredicted RBP20.77■□□□□ 0.91
SSH1-209ENST00000551165 TRIM51Q9BSJ1 452 aa20.77■□□□□ 0.91
SSH1-209ENST00000551165 CLDN5O00501 218 aa20.76■□□□□ 0.91
SSH1-209ENST00000551165 PSTPIP1O43586 416 aa20.76■□□□□ 0.91
SSH1-209ENST00000551165 WARSP23381 471 aaKnown RBP20.76■□□□□ 0.91
SSH1-209ENST00000551165 GSCP56915 257 aaPredicted RBP20.76■□□□□ 0.91
SSH1-209ENST00000551165 GPNMBQ14956 572 aa20.76■□□□□ 0.91
SSH1-209ENST00000551165 SH3PXD2AQ5TCZ1 1133 aa20.76■□□□□ 0.91
SSH1-209ENST00000551165 NFU1Q9UMS0 254 aa20.76■□□□□ 0.91
SSH1-209ENST00000551165 PTPN22Q9Y2R2 807 aa20.76■□□□□ 0.91
SSH1-209ENST00000551165 B4GALT3O60512 393 aa20.75■□□□□ 0.91
SSH1-209ENST00000551165 TAP1Q03518 808 aa20.75■□□□□ 0.91
SSH1-209ENST00000551165 ADCY2Q08462 1091 aa20.75■□□□□ 0.91
SSH1-209ENST00000551165 CD300LGQ6UXG3 332 aa20.75■□□□□ 0.91
SSH1-209ENST00000551165 CCDC50Q8IVM0 306 aa20.75■□□□□ 0.91
SSH1-209ENST00000551165 B3GALNT2Q8NCR0 500 aa20.75■□□□□ 0.91
SSH1-209ENST00000551165 AENQ8WTP8 325 aaKnown RBP20.75■□□□□ 0.91
SSH1-209ENST00000551165 WDR35Q9P2L0 1181 aa20.75■□□□□ 0.91
SSH1-209ENST00000551165 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.75■□□□□ 0.91
SSH1-209ENST00000551165 GABRDO14764 452 aa20.75■□□□□ 0.91
SSH1-209ENST00000551165 RALAP11233 206 aa20.75■□□□□ 0.91
SSH1-209ENST00000551165 MCM3P25205 808 aa20.75■□□□□ 0.91
SSH1-209ENST00000551165 IL1R2P27930 398 aa20.75■□□□□ 0.91
SSH1-209ENST00000551165 KCNJ1P48048 391 aa20.75■□□□□ 0.91
SSH1-209ENST00000551165 PIGHQ14442 188 aaPredicted RBP20.75■□□□□ 0.91
SSH1-209ENST00000551165 STILQ15468 1287 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms