RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 FRMD5Q7Z6J6 570 aa13.96□□□□□ -0.17
NPAS3-209ENST00000551008 ITIH5Q86UX2 942 aa13.96□□□□□ -0.17
NPAS3-209ENST00000551008 DEPDC1BQ8WUY9 529 aa13.96□□□□□ -0.17
NPAS3-209ENST00000551008 CLDN23Q96B33 292 aa13.96□□□□□ -0.17
NPAS3-209ENST00000551008 SYT15Q9BQS2 421 aa13.96□□□□□ -0.17
NPAS3-209ENST00000551008 SLC46A2Q9BY10 475 aa13.96□□□□□ -0.17
NPAS3-209ENST00000551008 GPR88Q9GZN0 384 aa13.96□□□□□ -0.17
NPAS3-209ENST00000551008 SCAND2PQ9GZW5 306 aaPredicted RBP13.96□□□□□ -0.17
NPAS3-209ENST00000551008 SMG9Q9H0W8 520 aaKnown RBP13.96□□□□□ -0.17
NPAS3-209ENST00000551008 SDCBP2Q9H190 292 aa13.96□□□□□ -0.17
NPAS3-209ENST00000551008 SLITRK6Q9H5Y7 841 aa13.96□□□□□ -0.17
NPAS3-209ENST00000551008 BRD9Q9H8M2 597 aa13.96□□□□□ -0.17
NPAS3-209ENST00000551008 TRPV5Q9NQA5 729 aa13.96□□□□□ -0.17
NPAS3-209ENST00000551008 ZNF292O60281 2723 aa13.96□□□□□ -0.18
NPAS3-209ENST00000551008 PDXKO00764 312 aa13.95□□□□□ -0.18
NPAS3-209ENST00000551008 EXOC3O60645 756 aa13.95□□□□□ -0.18
NPAS3-209ENST00000551008 NOL4O94818 638 aa13.95□□□□□ -0.18
NPAS3-209ENST00000551008 C4BPAP04003 597 aaKnown RBP13.95□□□□□ -0.18
NPAS3-209ENST00000551008 NR3C1P04150 777 aa13.95□□□□□ -0.18
NPAS3-209ENST00000551008 MYL1P05976 194 aa13.95□□□□□ -0.18
NPAS3-209ENST00000551008 WEE1P30291 646 aa13.95□□□□□ -0.18
NPAS3-209ENST00000551008 CACNA2D1P54289 1103 aa13.95□□□□□ -0.18
NPAS3-209ENST00000551008 MYO1EQ12965 1108 aa13.95□□□□□ -0.18
NPAS3-209ENST00000551008 PSMD2Q13200 908 aa13.95□□□□□ -0.18
NPAS3-209ENST00000551008 UBXN2BQ14CS0 331 aa13.95□□□□□ -0.18
NPAS3-209ENST00000551008 VEPH1Q14D04 833 aa13.95□□□□□ -0.18
NPAS3-209ENST00000551008 ZCWPW2Q504Y3 356 aa13.95□□□□□ -0.18
NPAS3-209ENST00000551008 FAM200AQ8TCP9 573 aa13.95□□□□□ -0.18
NPAS3-209ENST00000551008 MYLPFQ96A32 169 aa13.95□□□□□ -0.18
NPAS3-209ENST00000551008 SHDQ96IW2 340 aa13.95□□□□□ -0.18
NPAS3-209ENST00000551008 ZFYVE19Q96K21 471 aa13.95□□□□□ -0.18
NPAS3-209ENST00000551008 FNBP1Q96RU3 617 aa13.95□□□□□ -0.18
NPAS3-209ENST00000551008 OSBPL6Q9BZF3 934 aa13.95□□□□□ -0.18
NPAS3-209ENST00000551008 DPEP3Q9H4B8 488 aa13.95□□□□□ -0.18
NPAS3-209ENST00000551008 TASP1Q9H6P5 420 aa13.95□□□□□ -0.18
NPAS3-209ENST00000551008 SMYD3Q9H7B4 428 aa13.95□□□□□ -0.18
NPAS3-209ENST00000551008 VRTNQ9H8Y1 702 aa13.95□□□□□ -0.18
NPAS3-209ENST00000551008 TRAF3IP3Q9Y228 551 aa13.95□□□□□ -0.18
NPAS3-209ENST00000551008 CCL26Q9Y258 94 aa13.95□□□□□ -0.18
NPAS3-209ENST00000551008 SPTBN4Q9H254 2564 aa13.94□□□□□ -0.18
NPAS3-209ENST00000551008 PRR23AA6NEV1 266 aa13.94□□□□□ -0.18
NPAS3-209ENST00000551008 FAM170BA6NMN3 283 aa13.94□□□□□ -0.18
NPAS3-209ENST00000551008 SLC38A8A6NNN8 435 aa13.94□□□□□ -0.18
NPAS3-209ENST00000551008 TACC1O75410 805 aa13.94□□□□□ -0.18
NPAS3-209ENST00000551008 ZNF202O95125 648 aa13.94□□□□□ -0.18
NPAS3-209ENST00000551008 PDGFRBP09619 1106 aa13.94□□□□□ -0.18
NPAS3-209ENST00000551008 PCSK1P29120 753 aa13.94□□□□□ -0.18
NPAS3-209ENST00000551008 CDC25CP30307 473 aa13.94□□□□□ -0.18
NPAS3-209ENST00000551008 MAGEA11P43364 429 aa13.94□□□□□ -0.18
NPAS3-209ENST00000551008 SOX9P48436 509 aa13.94□□□□□ -0.18
NPAS3-209ENST00000551008 FMR1NBQ8N0W7 255 aaPredicted RBP13.94□□□□□ -0.18
NPAS3-209ENST00000551008 ENGASEQ8NFI3 743 aa13.94□□□□□ -0.18
NPAS3-209ENST00000551008 GOLGA5Q8TBA6 731 aa13.94□□□□□ -0.18
NPAS3-209ENST00000551008 CHFRQ96EP1 664 aa13.94□□□□□ -0.18
NPAS3-209ENST00000551008 TRMT2BQ96GJ1 504 aaKnown RBP13.94□□□□□ -0.18
NPAS3-209ENST00000551008 PCED1BQ96HM7 432 aa13.94□□□□□ -0.18
NPAS3-209ENST00000551008 FUBP3Q96I24 572 aaKnown RBP eCLIP13.94□□□□□ -0.18
NPAS3-209ENST00000551008 MYRFLQ96LU7 910 aa13.94□□□□□ -0.18
NPAS3-209ENST00000551008 SLC22A12Q96S37 553 aa13.94□□□□□ -0.18
NPAS3-209ENST00000551008 IRF2BPLQ9H1B7 796 aa13.94□□□□□ -0.18
NPAS3-209ENST00000551008 CDH9Q9ULB4 789 aa13.94□□□□□ -0.18
NPAS3-209ENST00000551008 MYOFQ9NZM1 2061 aa13.94□□□□□ -0.18
NPAS3-209ENST00000551008 FRYLO94915 3013 aa13.93□□□□□ -0.18
NPAS3-209ENST00000551008 CHADO15335 359 aa13.93□□□□□ -0.18
NPAS3-209ENST00000551008 FGF19O95750 216 aa13.93□□□□□ -0.18
NPAS3-209ENST00000551008 SP9P0CG40 484 aa13.93□□□□□ -0.18
NPAS3-209ENST00000551008 CSH1P0DML2 217 aa13.93□□□□□ -0.18
NPAS3-209ENST00000551008 CSH2P0DML3 217 aa13.93□□□□□ -0.18
NPAS3-209ENST00000551008 RFX1P22670 979 aa13.93□□□□□ -0.18
NPAS3-209ENST00000551008 RAP1GAPP47736 663 aa13.93□□□□□ -0.18
NPAS3-209ENST00000551008 CDH8P55286 799 aa13.93□□□□□ -0.18
NPAS3-209ENST00000551008 USP46P62068 366 aa13.93□□□□□ -0.18
NPAS3-209ENST00000551008 TNK2Q07912 1038 aa13.93□□□□□ -0.18
NPAS3-209ENST00000551008 KCNB1Q14721 858 aa13.93□□□□□ -0.18
NPAS3-209ENST00000551008 WDR72Q3MJ13 1102 aa13.93□□□□□ -0.18
NPAS3-209ENST00000551008 ZACNQ401N2 412 aa13.93□□□□□ -0.18
NPAS3-209ENST00000551008 TXNDC8Q6A555 127 aa13.93□□□□□ -0.18
NPAS3-209ENST00000551008 TXNDC11Q6PKC3 985 aa13.93□□□□□ -0.18
NPAS3-209ENST00000551008 SPATA2LQ8IUW3 424 aaPredicted RBP13.93□□□□□ -0.18
NPAS3-209ENST00000551008 C1orf210Q8IVY1 113 aa13.93□□□□□ -0.18
NPAS3-209ENST00000551008 SMYD4Q8IYR2 804 aaPredicted RBP13.93□□□□□ -0.18
NPAS3-209ENST00000551008 CMTM8Q8IZV2 173 aa13.93□□□□□ -0.18
NPAS3-209ENST00000551008 IRF7Q92985 503 aa13.93□□□□□ -0.18
NPAS3-209ENST00000551008 USP13Q92995 863 aaPredicted RBP13.93□□□□□ -0.18
NPAS3-209ENST00000551008 MMS19Q96T76 1030 aa13.93□□□□□ -0.18
NPAS3-209ENST00000551008 OBP2AQ9NY56 170 aa13.93□□□□□ -0.18
NPAS3-209ENST00000551008 MAPK8IP1Q9UQF2 711 aa13.93□□□□□ -0.18
NPAS3-209ENST00000551008 PIAS3Q9Y6X2 628 aa13.93□□□□□ -0.18
NPAS3-209ENST00000551008 OTOL1A6NHN0 477 aaPredicted RBP13.92□□□□□ -0.18
NPAS3-209ENST00000551008 ZNF263O14978 683 aa13.92□□□□□ -0.18
NPAS3-209ENST00000551008 GFRA3O60609 400 aa13.92□□□□□ -0.18
NPAS3-209ENST00000551008 AKAP3O75969 853 aa13.92□□□□□ -0.18
NPAS3-209ENST00000551008 BDNFP23560 247 aa13.92□□□□□ -0.18
NPAS3-209ENST00000551008 MCCD1P59942 119 aaPredicted RBP13.92□□□□□ -0.18
NPAS3-209ENST00000551008 RPL10AP62906 217 aaKnown RBP13.92□□□□□ -0.18
NPAS3-209ENST00000551008 PNOCQ13519 176 aa13.92□□□□□ -0.18
NPAS3-209ENST00000551008 GAS6Q14393 721 aa13.92□□□□□ -0.18
NPAS3-209ENST00000551008 NFIL3Q16649 462 aa13.92□□□□□ -0.18
NPAS3-209ENST00000551008 ARHGAP15Q53QZ3 475 aa13.92□□□□□ -0.18
NPAS3-209ENST00000551008 MDH1BQ5I0G3 518 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms