RNA–Protein interactions for RNA: ENST00000550880.5

PFDN5-212, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-212ENST00000550880 GATA6Q92908 595 aa11.93□□□□□ -0.5
PFDN5-212ENST00000550880 CNOT6LQ96LI5 555 aaKnown RBP11.93□□□□□ -0.5
PFDN5-212ENST00000550880 ZNF560Q96MR9 790 aa11.93□□□□□ -0.5
PFDN5-212ENST00000550880 TPSD1Q9BZJ3 242 aa11.93□□□□□ -0.5
PFDN5-212ENST00000550880 CCSER1Q9C0I3 900 aa11.93□□□□□ -0.5
PFDN5-212ENST00000550880 ZHX3Q9H4I2 956 aa11.93□□□□□ -0.5
PFDN5-212ENST00000550880 PARVGQ9HBI0 331 aa11.93□□□□□ -0.5
PFDN5-212ENST00000550880 ABCB6Q9NP58 842 aa11.93□□□□□ -0.5
PFDN5-212ENST00000550880 EVLQ9UI08 416 aaPredicted RBP11.93□□□□□ -0.5
PFDN5-212ENST00000550880 CIZ1Q9ULV3 898 aaPredicted RBP11.93□□□□□ -0.5
PFDN5-212ENST00000550880 WASF3Q9UPY6 502 aa11.93□□□□□ -0.5
PFDN5-212ENST00000550880 NEUROG3Q9Y4Z2 214 aa11.93□□□□□ -0.5
PFDN5-212ENST00000550880 WNT6Q9Y6F9 365 aa11.93□□□□□ -0.5
PFDN5-212ENST00000550880 KIF26AQ9ULI4 1882 aaPredicted RBP11.93□□□□□ -0.5
PFDN5-212ENST00000550880 TULP1O00294 542 aaPredicted RBP11.92□□□□□ -0.5
PFDN5-212ENST00000550880 CDX4O14627 284 aaPredicted RBP11.92□□□□□ -0.5
PFDN5-212ENST00000550880 TRAK2O60296 914 aa11.92□□□□□ -0.5
PFDN5-212ENST00000550880 ACOT2P49753 483 aa11.92□□□□□ -0.5
PFDN5-212ENST00000550880 ATXN3P54252 364 aaPredicted RBP11.92□□□□□ -0.5
PFDN5-212ENST00000550880 SEC13P55735 322 aa11.92□□□□□ -0.5
PFDN5-212ENST00000550880 MYL7Q01449 175 aa11.92□□□□□ -0.5
PFDN5-212ENST00000550880 POU5F1Q01860 360 aaKnown RBP11.92□□□□□ -0.5
PFDN5-212ENST00000550880 ST3GAL1Q11201 340 aa11.92□□□□□ -0.5
PFDN5-212ENST00000550880 BYSLQ13895 437 aaKnown RBP11.92□□□□□ -0.5
PFDN5-212ENST00000550880 KCNB1Q14721 858 aa11.92□□□□□ -0.5
PFDN5-212ENST00000550880 ZNF77Q15935 545 aa11.92□□□□□ -0.5
PFDN5-212ENST00000550880 EML3Q32P44 896 aa11.92□□□□□ -0.5
PFDN5-212ENST00000550880 C2orf27AQ580R0 203 aa11.92□□□□□ -0.5
PFDN5-212ENST00000550880 TRIM61Q5EBN2 209 aa11.92□□□□□ -0.5
PFDN5-212ENST00000550880 NAIF1Q69YI7 327 aaPredicted RBP11.92□□□□□ -0.5
PFDN5-212ENST00000550880 LRSAM1Q6UWE0 723 aa11.92□□□□□ -0.5
PFDN5-212ENST00000550880 RASSF3Q86WH2 238 aa11.92□□□□□ -0.5
PFDN5-212ENST00000550880 NT5DC4Q86YG4 428 aa11.92□□□□□ -0.5
PFDN5-212ENST00000550880 USP33Q8TEY7 942 aa11.92□□□□□ -0.5
PFDN5-212ENST00000550880 CALML4Q96GE6 196 aa11.92□□□□□ -0.5
PFDN5-212ENST00000550880 TRMT2BQ96GJ1 504 aaKnown RBP11.92□□□□□ -0.5
PFDN5-212ENST00000550880 PNMA5Q96PV4 448 aa11.92□□□□□ -0.5
PFDN5-212ENST00000550880 TMEM121BQ9BXQ6 578 aaPredicted RBP11.92□□□□□ -0.5
PFDN5-212ENST00000550880 LHX6Q9UPM6 363 aa11.92□□□□□ -0.5
PFDN5-212ENST00000550880 FRYQ5TBA9 3013 aa11.91□□□□□ -0.5
PFDN5-212ENST00000550880 VWA3AA6NCI4 1184 aa11.91□□□□□ -0.5
PFDN5-212ENST00000550880 MYMKA6NI61 221 aa11.91□□□□□ -0.5
PFDN5-212ENST00000550880 PATE3B3GLJ2 98 aa11.91□□□□□ -0.5
PFDN5-212ENST00000550880 H0Y626 953 aa11.91□□□□□ -0.5
PFDN5-212ENST00000550880 TNFRSF10BO14763 440 aa11.91□□□□□ -0.5
PFDN5-212ENST00000550880 SLC26A4O43511 780 aa11.91□□□□□ -0.5
PFDN5-212ENST00000550880 HUS1O60921 280 aa11.91□□□□□ -0.5
PFDN5-212ENST00000550880 TBCAO75347 108 aaKnown RBP11.91□□□□□ -0.5
PFDN5-212ENST00000550880 NOL4O94818 638 aa11.91□□□□□ -0.5
PFDN5-212ENST00000550880 IL18RAPO95256 599 aa11.91□□□□□ -0.5
PFDN5-212ENST00000550880 TRIM16O95361 564 aa11.91□□□□□ -0.5
PFDN5-212ENST00000550880 TOP3BO95985 862 aaKnown RBP11.91□□□□□ -0.5
PFDN5-212ENST00000550880 HDCP19113 662 aa11.91□□□□□ -0.5
PFDN5-212ENST00000550880 GPR15P49685 360 aa11.91□□□□□ -0.5
PFDN5-212ENST00000550880 MRPS21P82921 87 aaKnown RBP11.91□□□□□ -0.5
PFDN5-212ENST00000550880 USP4Q13107 963 aa11.91□□□□□ -0.5
PFDN5-212ENST00000550880 DHX8Q14562 1220 aaKnown RBP11.91□□□□□ -0.5
PFDN5-212ENST00000550880 CRY1Q16526 586 aa11.91□□□□□ -0.5
PFDN5-212ENST00000550880 DDR2Q16832 855 aa11.91□□□□□ -0.5
PFDN5-212ENST00000550880 RILPL1Q5EBL4 403 aa11.91□□□□□ -0.5
PFDN5-212ENST00000550880 ARSHQ5FYA8 562 aa11.91□□□□□ -0.5
PFDN5-212ENST00000550880 SDHAF4Q5VUM1 108 aa11.91□□□□□ -0.5
PFDN5-212ENST00000550880 KIAA1211LQ6NV74 962 aa11.91□□□□□ -0.5
PFDN5-212ENST00000550880 GPBP1Q86WP2 473 aa11.91□□□□□ -0.5
PFDN5-212ENST00000550880 SPATA2LQ8IUW3 424 aaPredicted RBP11.91□□□□□ -0.5
PFDN5-212ENST00000550880 SYT12Q8IV01 421 aa11.91□□□□□ -0.5
PFDN5-212ENST00000550880 EFCAB13Q8IY85 973 aa11.91□□□□□ -0.5
PFDN5-212ENST00000550880 HDDC3Q8N4P3 179 aa11.91□□□□□ -0.5
PFDN5-212ENST00000550880 RIN3Q8TB24 985 aa11.91□□□□□ -0.5
PFDN5-212ENST00000550880 SH3RF2Q8TEC5 729 aa11.91□□□□□ -0.5
PFDN5-212ENST00000550880 LEO1Q8WVC0 666 aaPredicted RBP11.91□□□□□ -0.5
PFDN5-212ENST00000550880 MYRFLQ96LU7 910 aa11.91□□□□□ -0.5
PFDN5-212ENST00000550880 ZSCAN31Q96LW9 406 aaPredicted RBP11.91□□□□□ -0.5
PFDN5-212ENST00000550880 CYP2S1Q96SQ9 504 aa11.91□□□□□ -0.5
PFDN5-212ENST00000550880 ACBD6Q9BR61 282 aa11.91□□□□□ -0.5
PFDN5-212ENST00000550880 REEP2Q9BRK0 252 aa11.91□□□□□ -0.5
PFDN5-212ENST00000550880 POLMQ9NP87 494 aaPredicted RBP11.91□□□□□ -0.5
PFDN5-212ENST00000550880 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.91□□□□□ -0.5
PFDN5-212ENST00000550880 BCCIPQ9P287 314 aaKnown RBP eCLIP11.91□□□□□ -0.5
PFDN5-212ENST00000550880 AGO2Q9UKV8 859 aaKnown RBP11.91□□□□□ -0.5
PFDN5-212ENST00000550880 MMP17Q9ULZ9 603 aa11.91□□□□□ -0.5
PFDN5-212ENST00000550880 KIF3AQ9Y496 699 aa11.91□□□□□ -0.5
PFDN5-212ENST00000550880 ATG2BQ96BY7 2078 aa11.91□□□□□ -0.5
PFDN5-212ENST00000550880 HOXB3P14651 431 aaPredicted RBP11.9□□□□□ -0.5
PFDN5-212ENST00000550880 BCKDHBP21953 392 aa11.9□□□□□ -0.5
PFDN5-212ENST00000550880 CYP2F1P24903 491 aa11.9□□□□□ -0.5
PFDN5-212ENST00000550880 MAPK8P45983 427 aa11.9□□□□□ -0.5
PFDN5-212ENST00000550880 ATP2C1P98194 919 aaPredicted RBP11.9□□□□□ -0.5
PFDN5-212ENST00000550880 RING1Q06587 406 aa11.9□□□□□ -0.5
PFDN5-212ENST00000550880 POSTNQ15063 836 aa11.9□□□□□ -0.5
PFDN5-212ENST00000550880 HSF5Q4G112 596 aaPredicted RBP11.9□□□□□ -0.5
PFDN5-212ENST00000550880 SPDYCQ5MJ68 293 aa11.9□□□□□ -0.5
PFDN5-212ENST00000550880 MCTP1Q6DN14 999 aa11.9□□□□□ -0.5
PFDN5-212ENST00000550880 TMEM86AQ8N2M4 240 aa11.9□□□□□ -0.5
PFDN5-212ENST00000550880 CCDC33Q8N5R6 958 aa11.9□□□□□ -0.5
PFDN5-212ENST00000550880 ARL14EPQ8N8R7 260 aaPredicted RBP11.9□□□□□ -0.5
PFDN5-212ENST00000550880 MDGA1Q8NFP4 955 aa11.9□□□□□ -0.5
PFDN5-212ENST00000550880 RASSF8Q8NHQ8 419 aa11.9□□□□□ -0.5
PFDN5-212ENST00000550880 WHAMMQ8TF30 809 aa11.9□□□□□ -0.5
PFDN5-212ENST00000550880 CACTINQ8WUQ7 758 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms