RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 RRAGAQ7L523 313 aa23.99■■□□□ 1.43
BRF1-216ENST00000550208 DNAJB7Q7Z6W7 309 aaPredicted RBP23.99■■□□□ 1.43
BRF1-216ENST00000550208 DHX40Q8IX18 779 aaKnown RBP23.99■■□□□ 1.43
BRF1-216ENST00000550208 ELMOD1Q8N336 334 aa23.99■■□□□ 1.43
BRF1-216ENST00000550208 GPR152Q8TDT2 470 aa23.99■■□□□ 1.43
BRF1-216ENST00000550208 KAT5Q92993 513 aa23.99■■□□□ 1.43
BRF1-216ENST00000550208 NT5C1AQ9BXI3 368 aa23.99■■□□□ 1.43
BRF1-216ENST00000550208 HSD3B7Q9H2F3 369 aa23.99■■□□□ 1.43
BRF1-216ENST00000550208 CLUHO75153 1309 aa23.99■■□□□ 1.43
BRF1-216ENST00000550208 RHOP08100 348 aa23.98■■□□□ 1.43
BRF1-216ENST00000550208 FSHRP23945 695 aa23.98■■□□□ 1.43
BRF1-216ENST00000550208 MAGEA11P43364 429 aa23.98■■□□□ 1.43
BRF1-216ENST00000550208 ZNF165P49910 485 aa23.98■■□□□ 1.43
BRF1-216ENST00000550208 KRT31Q15323 416 aa23.98■■□□□ 1.43
BRF1-216ENST00000550208 PABPC1LQ4VXU2 614 aaKnown RBP23.98■■□□□ 1.43
BRF1-216ENST00000550208 PHLDB3Q6NSJ2 640 aa23.98■■□□□ 1.43
BRF1-216ENST00000550208 PAQR9Q6ZVX9 377 aa23.98■■□□□ 1.43
BRF1-216ENST00000550208 SCN4BQ8IWT1 228 aa23.98■■□□□ 1.43
BRF1-216ENST00000550208 PPM1KQ8N3J5 372 aa23.98■■□□□ 1.43
BRF1-216ENST00000550208 C12orf29Q8N999 325 aa23.98■■□□□ 1.43
BRF1-216ENST00000550208 FAM200AQ8TCP9 573 aa23.98■■□□□ 1.43
BRF1-216ENST00000550208 UHRF1Q96T88 793 aaPredicted RBP23.98■■□□□ 1.43
BRF1-216ENST00000550208 VPS16Q9H269 839 aa23.98■■□□□ 1.43
BRF1-216ENST00000550208 CD320Q9NPF0 282 aa23.98■■□□□ 1.43
BRF1-216ENST00000550208 GCNT4Q9P109 453 aa23.98■■□□□ 1.43
BRF1-216ENST00000550208 NOTCH4Q99466 2003 aa23.98■■□□□ 1.43
BRF1-216ENST00000550208 GTPBP10A4D1E9 387 aaKnown RBP23.97■■□□□ 1.43
BRF1-216ENST00000550208 C19orf67A6NJJ6 358 aa23.97■■□□□ 1.43
BRF1-216ENST00000550208 SMTNL1A8MU46 457 aa23.97■■□□□ 1.43
BRF1-216ENST00000550208 LOC730098B7Z3J9 87 aa23.97■■□□□ 1.43
BRF1-216ENST00000550208 CDK11BP21127 795 aaKnown RBP23.97■■□□□ 1.43
BRF1-216ENST00000550208 TBXAS1P24557 533 aaPredicted RBP23.97■■□□□ 1.43
BRF1-216ENST00000550208 RPL10AP62906 217 aaKnown RBP23.97■■□□□ 1.43
BRF1-216ENST00000550208 APBA1Q02410 837 aa23.97■■□□□ 1.43
BRF1-216ENST00000550208 EXOC3L4Q17RC7 722 aa23.97■■□□□ 1.43
BRF1-216ENST00000550208 UNC80Q8N2C7 3258 aa23.97■■□□□ 1.43
BRF1-216ENST00000550208 TTC39CQ8N584 583 aa23.97■■□□□ 1.43
BRF1-216ENST00000550208 UBR7Q8N806 425 aa23.97■■□□□ 1.43
BRF1-216ENST00000550208 ITFG1Q8TB96 612 aa23.97■■□□□ 1.43
BRF1-216ENST00000550208 LRRC3Q9BY71 257 aa23.97■■□□□ 1.43
BRF1-216ENST00000550208 ZNF518BQ9C0D4 1074 aa23.97■■□□□ 1.43
BRF1-216ENST00000550208 ASB3Q9Y575 518 aa23.97■■□□□ 1.43
BRF1-216ENST00000550208 C2CD4DB7Z1M9 353 aa23.96■■□□□ 1.43
BRF1-216ENST00000550208 PES1O00541 588 aaKnown RBP23.96■■□□□ 1.43
BRF1-216ENST00000550208 ZNF18P17022 549 aa23.96■■□□□ 1.43
BRF1-216ENST00000550208 PON1P27169 355 aa23.96■■□□□ 1.43
BRF1-216ENST00000550208 GRIK1P39086 918 aa23.96■■□□□ 1.43
BRF1-216ENST00000550208 RAD23BP54727 409 aa23.96■■□□□ 1.43
BRF1-216ENST00000550208 IQCB1Q15051 598 aa23.96■■□□□ 1.43
BRF1-216ENST00000550208 SLC5A9Q2M3M2 681 aa23.96■■□□□ 1.43
BRF1-216ENST00000550208 TRIM65Q6PJ69 517 aa23.96■■□□□ 1.43
BRF1-216ENST00000550208 SLC4A11Q8NBS3 891 aa23.96■■□□□ 1.43
BRF1-216ENST00000550208 STKLD1Q8NE28 680 aa23.96■■□□□ 1.43
BRF1-216ENST00000550208 PSMG2Q969U7 264 aa23.96■■□□□ 1.43
BRF1-216ENST00000550208 TCEAL4Q96EI5 215 aa23.96■■□□□ 1.43
BRF1-216ENST00000550208 TMEM176AQ96HP8 235 aa23.96■■□□□ 1.43
BRF1-216ENST00000550208 HEXIM2Q96MH2 286 aaKnown RBP23.96■■□□□ 1.43
BRF1-216ENST00000550208 MYADMQ96S97 322 aa23.96■■□□□ 1.43
BRF1-216ENST00000550208 MED10Q9BTT4 135 aa23.96■■□□□ 1.43
BRF1-216ENST00000550208 UBE2TQ9NPD8 197 aaPredicted RBP23.96■■□□□ 1.43
BRF1-216ENST00000550208 AVENQ9NQS1 362 aaPredicted RBP23.96■■□□□ 1.43
BRF1-216ENST00000550208 FAM49BQ9NUQ9 324 aa23.96■■□□□ 1.43
BRF1-216ENST00000550208 LIMA1Q9UHB6 759 aaKnown RBP23.96■■□□□ 1.43
BRF1-216ENST00000550208 NRG2O14511 850 aaPredicted RBP23.95■■□□□ 1.42
BRF1-216ENST00000550208 MYL4P12829 197 aa23.95■■□□□ 1.42
BRF1-216ENST00000550208 CCDC130P13994 396 aa23.95■■□□□ 1.42
BRF1-216ENST00000550208 ACO1P21399 889 aaKnown RBP23.95■■□□□ 1.42
BRF1-216ENST00000550208 CCR2P41597 374 aa23.95■■□□□ 1.42
BRF1-216ENST00000550208 CACNA2D1P54289 1103 aa23.95■■□□□ 1.42
BRF1-216ENST00000550208 YWHAEP62258 255 aaKnown RBP23.95■■□□□ 1.42
BRF1-216ENST00000550208 KCNMA1Q12791 1236 aa23.95■■□□□ 1.42
BRF1-216ENST00000550208 VEPH1Q14D04 833 aa23.95■■□□□ 1.42
BRF1-216ENST00000550208 CYP4A22Q5TCH4 519 aa23.95■■□□□ 1.42
BRF1-216ENST00000550208 GJB7Q6PEY0 223 aa23.95■■□□□ 1.42
BRF1-216ENST00000550208 VSTM1Q6UX27 236 aa23.95■■□□□ 1.42
BRF1-216ENST00000550208 GET4Q7L5D6 327 aaPredicted RBP23.95■■□□□ 1.42
BRF1-216ENST00000550208 ITIH5Q86UX2 942 aa23.95■■□□□ 1.42
BRF1-216ENST00000550208 FUKQ8N0W3 1084 aa23.95■■□□□ 1.42
BRF1-216ENST00000550208 GJD3Q8N144 294 aa23.95■■□□□ 1.42
BRF1-216ENST00000550208 KREMEN1Q96MU8 473 aa23.95■■□□□ 1.42
BRF1-216ENST00000550208 FAM124BQ9H5Z6 455 aaPredicted RBP23.95■■□□□ 1.42
BRF1-216ENST00000550208 ZNF334Q9HCZ1 680 aaPredicted RBP23.95■■□□□ 1.42
BRF1-216ENST00000550208 TMEM30AQ9NV96 361 aa23.95■■□□□ 1.42
BRF1-216ENST00000550208 USTQ9Y2C2 406 aa23.95■■□□□ 1.42
BRF1-216ENST00000550208 MRPS23Q9Y3D9 190 aaKnown RBP23.95■■□□□ 1.42
BRF1-216ENST00000550208 NR2E1Q9Y466 385 aa23.95■■□□□ 1.42
BRF1-216ENST00000550208 GBP2P32456 591 aaPredicted RBP23.94■■□□□ 1.42
BRF1-216ENST00000550208 SSTR3P32745 418 aaPredicted RBP23.94■■□□□ 1.42
BRF1-216ENST00000550208 COPB1P53618 953 aaKnown RBP23.94■■□□□ 1.42
BRF1-216ENST00000550208 EPHA5P54756 1037 aa23.94■■□□□ 1.42
BRF1-216ENST00000550208 GCNT1Q02742 428 aa23.94■■□□□ 1.42
BRF1-216ENST00000550208 MTMR3Q13615 1198 aa23.94■■□□□ 1.42
BRF1-216ENST00000550208 PRSS36Q5K4E3 855 aa23.94■■□□□ 1.42
BRF1-216ENST00000550208 PDZD4Q76G19 769 aaPredicted RBP23.94■■□□□ 1.42
BRF1-216ENST00000550208 OTOP3Q7RTS5 596 aa23.94■■□□□ 1.42
BRF1-216ENST00000550208 FAM35AQ86V20 835 aa23.94■■□□□ 1.42
BRF1-216ENST00000550208 TMC8Q8IU68 726 aa23.94■■□□□ 1.42
BRF1-216ENST00000550208 SLC2A14Q8TDB8 520 aa23.94■■□□□ 1.42
BRF1-216ENST00000550208 CYFIP2Q96F07 1278 aa23.94■■□□□ 1.42
BRF1-216ENST00000550208 COL25A1Q9BXS0 654 aaPredicted RBP23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms