RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 ZSWIM3Q96MP5 696 aa18.4■□□□□ 0.54
CHMP1A-208ENST00000550102 ZFP14Q9HCL3 533 aa18.4■□□□□ 0.54
CHMP1A-208ENST00000550102 ARHGEF3Q9NR81 526 aa18.4■□□□□ 0.54
CHMP1A-208ENST00000550102 CA14Q9ULX7 337 aa18.4■□□□□ 0.54
CHMP1A-208ENST00000550102 WDFY4Q6ZS81 3184 aa18.4■□□□□ 0.54
CHMP1A-208ENST00000550102 A8MXQ7 604 aa18.39■□□□□ 0.53
CHMP1A-208ENST00000550102 STX10O60499 249 aa18.39■□□□□ 0.53
CHMP1A-208ENST00000550102 RFX1P22670 979 aa18.39■□□□□ 0.53
CHMP1A-208ENST00000550102 GTF2H1P32780 548 aa18.39■□□□□ 0.53
CHMP1A-208ENST00000550102 RAP1GAPP47736 663 aa18.39■□□□□ 0.53
CHMP1A-208ENST00000550102 GPR15P49685 360 aa18.39■□□□□ 0.53
CHMP1A-208ENST00000550102 VCPP55072 806 aaKnown RBP18.39■□□□□ 0.53
CHMP1A-208ENST00000550102 FKBP3Q00688 224 aaKnown RBP18.39■□□□□ 0.53
CHMP1A-208ENST00000550102 PFKPQ01813 784 aa18.39■□□□□ 0.53
CHMP1A-208ENST00000550102 CYP27A1Q02318 531 aa18.39■□□□□ 0.53
CHMP1A-208ENST00000550102 PPP3CAQ08209 521 aa18.39■□□□□ 0.53
CHMP1A-208ENST00000550102 DDR2Q16832 855 aa18.39■□□□□ 0.53
CHMP1A-208ENST00000550102 ANKRD40Q6AI12 368 aa18.39■□□□□ 0.53
CHMP1A-208ENST00000550102 TANGO2Q6ICL3 276 aa18.39■□□□□ 0.53
CHMP1A-208ENST00000550102 VSTM1Q6UX27 236 aa18.39■□□□□ 0.53
CHMP1A-208ENST00000550102 SCN4BQ8IWT1 228 aa18.39■□□□□ 0.53
CHMP1A-208ENST00000550102 B3GALNT2Q8NCR0 500 aa18.39■□□□□ 0.53
CHMP1A-208ENST00000550102 MYCBPAPQ8TBZ2 947 aa18.39■□□□□ 0.53
CHMP1A-208ENST00000550102 PCED1BQ96HM7 432 aa18.39■□□□□ 0.53
CHMP1A-208ENST00000550102 DHTKD1Q96HY7 919 aaPredicted RBP18.39■□□□□ 0.53
CHMP1A-208ENST00000550102 ATXN3LQ9H3M9 355 aa18.39■□□□□ 0.53
CHMP1A-208ENST00000550102 MMRN2Q9H8L6 949 aa18.39■□□□□ 0.53
CHMP1A-208ENST00000550102 TRPV4Q9HBA0 871 aa18.39■□□□□ 0.53
CHMP1A-208ENST00000550102 IL21Q9HBE4 155 aa18.39■□□□□ 0.53
CHMP1A-208ENST00000550102 TMEM8AQ9HCN3 771 aa18.39■□□□□ 0.53
CHMP1A-208ENST00000550102 MAGEC2Q9UBF1 373 aaPredicted RBP18.39■□□□□ 0.53
CHMP1A-208ENST00000550102 NME7Q9Y5B8 376 aa18.39■□□□□ 0.53
CHMP1A-208ENST00000550102 MYO16Q9Y6X6 1858 aa18.39■□□□□ 0.53
CHMP1A-208ENST00000550102 TRIM49BA6NDI0 452 aa18.38■□□□□ 0.53
CHMP1A-208ENST00000550102 HMGA1P17096 107 aaKnown RBP18.38■□□□□ 0.53
CHMP1A-208ENST00000550102 PTPN1P18031 435 aaKnown RBP18.38■□□□□ 0.53
CHMP1A-208ENST00000550102 CCNE1P24864 410 aa18.38■□□□□ 0.53
CHMP1A-208ENST00000550102 MXI1P50539 228 aa18.38■□□□□ 0.53
CHMP1A-208ENST00000550102 PMS1P54277 932 aaKnown RBP18.38■□□□□ 0.53
CHMP1A-208ENST00000550102 NOP14P78316 857 aaKnown RBP18.38■□□□□ 0.53
CHMP1A-208ENST00000550102 GPC5P78333 572 aa18.38■□□□□ 0.53
CHMP1A-208ENST00000550102 STXBP5Q5T5C0 1151 aa18.38■□□□□ 0.53
CHMP1A-208ENST00000550102 GPR158Q5T848 1215 aa18.38■□□□□ 0.53
CHMP1A-208ENST00000550102 SDHAF4Q5VUM1 108 aa18.38■□□□□ 0.53
CHMP1A-208ENST00000550102 ISM2Q6H9L7 571 aa18.38■□□□□ 0.53
CHMP1A-208ENST00000550102 ASTLQ6HA08 431 aaPredicted RBP18.38■□□□□ 0.53
CHMP1A-208ENST00000550102 STKLD1Q8NE28 680 aa18.38■□□□□ 0.53
CHMP1A-208ENST00000550102 FLCNQ8NFG4 579 aa18.38■□□□□ 0.53
CHMP1A-208ENST00000550102 TAS1R2Q8TE23 839 aa18.38■□□□□ 0.53
CHMP1A-208ENST00000550102 FAM122AQ96E09 287 aa18.38■□□□□ 0.53
CHMP1A-208ENST00000550102 TRMT2BQ96GJ1 504 aaKnown RBP18.38■□□□□ 0.53
CHMP1A-208ENST00000550102 TNIP3Q96KP6 325 aa18.38■□□□□ 0.53
CHMP1A-208ENST00000550102 ELOVL4Q9GZR5 314 aa18.38■□□□□ 0.53
CHMP1A-208ENST00000550102 DPEP3Q9H4B8 488 aa18.38■□□□□ 0.53
CHMP1A-208ENST00000550102 UXTQ9UBK9 157 aaPredicted RBP18.38■□□□□ 0.53
CHMP1A-208ENST00000550102 ZMYM5Q9UJ78 669 aa18.38■□□□□ 0.53
CHMP1A-208ENST00000550102 KRBA1A5PL33 1030 aa18.37■□□□□ 0.53
CHMP1A-208ENST00000550102 SLC38A8A6NNN8 435 aa18.37■□□□□ 0.53
CHMP1A-208ENST00000550102 BIN1O00499 593 aa18.37■□□□□ 0.53
CHMP1A-208ENST00000550102 NOL4O94818 638 aa18.37■□□□□ 0.53
CHMP1A-208ENST00000550102 BDNFP23560 247 aa18.37■□□□□ 0.53
CHMP1A-208ENST00000550102 ANXA13P27216 316 aa18.37■□□□□ 0.53
CHMP1A-208ENST00000550102 PLA2G5P39877 138 aa18.37■□□□□ 0.53
CHMP1A-208ENST00000550102 ASPAP45381 313 aa18.37■□□□□ 0.53
CHMP1A-208ENST00000550102 CLCN5P51795 746 aa18.37■□□□□ 0.53
CHMP1A-208ENST00000550102 CDH8P55286 799 aa18.37■□□□□ 0.53
CHMP1A-208ENST00000550102 NLRP12P59046 1061 aa18.37■□□□□ 0.53
CHMP1A-208ENST00000550102 CYP4F8P98187 520 aa18.37■□□□□ 0.53
CHMP1A-208ENST00000550102 MORC3Q14149 939 aa18.37■□□□□ 0.53
CHMP1A-208ENST00000550102 DCAF17Q5H9S7 520 aaPredicted RBP18.37■□□□□ 0.53
CHMP1A-208ENST00000550102 CWF19L1Q69YN2 538 aaKnown RBP18.37■□□□□ 0.53
CHMP1A-208ENST00000550102 KRT39Q6A163 491 aa18.37■□□□□ 0.53
CHMP1A-208ENST00000550102 KLHL10Q6JEL2 608 aa18.37■□□□□ 0.53
CHMP1A-208ENST00000550102 CCDC150Q8NCX0 1101 aa18.37■□□□□ 0.53
CHMP1A-208ENST00000550102 DEPDC1BQ8WUY9 529 aa18.37■□□□□ 0.53
CHMP1A-208ENST00000550102 E2F7Q96AV8 911 aa18.37■□□□□ 0.53
CHMP1A-208ENST00000550102 ELMO3Q96BJ8 720 aa18.37■□□□□ 0.53
CHMP1A-208ENST00000550102 CEP295NLQ96MC4 621 aa18.37■□□□□ 0.53
CHMP1A-208ENST00000550102 PLA2G2FQ9BZM2 168 aa18.37■□□□□ 0.53
CHMP1A-208ENST00000550102 NIF3L1Q9GZT8 377 aa18.37■□□□□ 0.53
CHMP1A-208ENST00000550102 SDCBP2Q9H190 292 aa18.37■□□□□ 0.53
CHMP1A-208ENST00000550102 TASP1Q9H6P5 420 aa18.37■□□□□ 0.53
CHMP1A-208ENST00000550102 TBC1D17Q9HA65 648 aa18.37■□□□□ 0.53
CHMP1A-208ENST00000550102 MAGED2Q9UNF1 606 aaPredicted RBP18.37■□□□□ 0.53
CHMP1A-208ENST00000550102 ATP8B3O60423 1300 aa18.37■□□□□ 0.53
CHMP1A-208ENST00000550102 CACNA1HO95180 2353 aa18.37■□□□□ 0.53
CHMP1A-208ENST00000550102 TRIM66O15016 1216 aa18.36■□□□□ 0.53
CHMP1A-208ENST00000550102 CD44P16070 742 aaKnown RBP18.36■□□□□ 0.53
CHMP1A-208ENST00000550102 BMP6P22004 513 aa18.36■□□□□ 0.53
CHMP1A-208ENST00000550102 AVPR2P30518 371 aa18.36■□□□□ 0.53
CHMP1A-208ENST00000550102 MCCD1P59942 119 aaPredicted RBP18.36■□□□□ 0.53
CHMP1A-208ENST00000550102 COL4A3Q01955 1670 aa18.36■□□□□ 0.53
CHMP1A-208ENST00000550102 GRM2Q14416 872 aa18.36■□□□□ 0.53
CHMP1A-208ENST00000550102 TCERG1LQ5VWI1 586 aa18.36■□□□□ 0.53
CHMP1A-208ENST00000550102 SPOPLQ6IQ16 392 aa18.36■□□□□ 0.53
CHMP1A-208ENST00000550102 VITQ6UXI7 678 aa18.36■□□□□ 0.53
CHMP1A-208ENST00000550102 SPATA17Q96L03 361 aa18.36■□□□□ 0.53
CHMP1A-208ENST00000550102 PRRX2Q99811 253 aa18.36■□□□□ 0.53
CHMP1A-208ENST00000550102 ARMCX3Q9UH62 379 aaPredicted RBP18.36■□□□□ 0.53
CHMP1A-208ENST00000550102 CTNND2Q9UQB3 1225 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms