RNA–Protein interactions for RNA: ENST00000550100.5

LETMD1-221, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 1,480 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-221ENST00000550100 BIRC3Q13489 604 aa12.62□□□□□ -0.39
LETMD1-221ENST00000550100 TRPC3Q13507 836 aa12.62□□□□□ -0.39
LETMD1-221ENST00000550100 NFE2Q16621 373 aaPredicted RBP12.62□□□□□ -0.39
LETMD1-221ENST00000550100 MDH1BQ5I0G3 518 aa12.62□□□□□ -0.39
LETMD1-221ENST00000550100 GPR158Q5T848 1215 aa12.62□□□□□ -0.39
LETMD1-221ENST00000550100 ANKRD40Q6AI12 368 aa12.62□□□□□ -0.39
LETMD1-221ENST00000550100 SCARA5Q6ZMJ2 495 aa12.62□□□□□ -0.39
LETMD1-221ENST00000550100 PAQR9Q6ZVX9 377 aa12.62□□□□□ -0.39
LETMD1-221ENST00000550100 LEMD2Q8NC56 503 aa12.62□□□□□ -0.39
LETMD1-221ENST00000550100 PCED1BQ96HM7 432 aa12.62□□□□□ -0.39
LETMD1-221ENST00000550100 TIGD1Q96MW7 591 aa12.62□□□□□ -0.39
LETMD1-221ENST00000550100 B3GNT5Q9BYG0 378 aa12.62□□□□□ -0.39
LETMD1-221ENST00000550100 ABCB6Q9NP58 842 aa12.62□□□□□ -0.39
LETMD1-221ENST00000550100 FAM86C1Q9NVL1 165 aa12.62□□□□□ -0.39
LETMD1-221ENST00000550100 DLGAP2Q9P1A6 1054 aa12.62□□□□□ -0.39
LETMD1-221ENST00000550100 HMGXB4Q9UGU5 601 aa12.62□□□□□ -0.39
LETMD1-221ENST00000550100 MAN1B1Q9UKM7 699 aa12.62□□□□□ -0.39
LETMD1-221ENST00000550100 CDH9Q9ULB4 789 aa12.62□□□□□ -0.39
LETMD1-221ENST00000550100 OBSL1O75147 1896 aa12.62□□□□□ -0.39
LETMD1-221ENST00000550100 COL4A2P08572 1712 aa12.62□□□□□ -0.39
LETMD1-221ENST00000550100 H0Y858 1186 aa12.61□□□□□ -0.39
LETMD1-221ENST00000550100 ARNTLO00327 626 aa12.61□□□□□ -0.39
LETMD1-221ENST00000550100 NOL4O94818 638 aa12.61□□□□□ -0.39
LETMD1-221ENST00000550100 PTPN1P18031 435 aaKnown RBP12.61□□□□□ -0.39
LETMD1-221ENST00000550100 PCSK1P29120 753 aa12.61□□□□□ -0.39
LETMD1-221ENST00000550100 ATICP31939 592 aa12.61□□□□□ -0.39
LETMD1-221ENST00000550100 FZD5Q13467 585 aa12.61□□□□□ -0.39
LETMD1-221ENST00000550100 CFAP221Q4G0U5 840 aa12.61□□□□□ -0.39
LETMD1-221ENST00000550100 ZNF658Q5TYW1 1059 aaPredicted RBP12.61□□□□□ -0.39
LETMD1-221ENST00000550100 TXNDC8Q6A555 127 aa12.61□□□□□ -0.39
LETMD1-221ENST00000550100 ITIH5Q86UX2 942 aa12.61□□□□□ -0.39
LETMD1-221ENST00000550100 SPATA2LQ8IUW3 424 aaPredicted RBP12.61□□□□□ -0.39
LETMD1-221ENST00000550100 SCN4BQ8IWT1 228 aa12.61□□□□□ -0.39
LETMD1-221ENST00000550100 FAM186BQ8IYM0 893 aa12.61□□□□□ -0.39
LETMD1-221ENST00000550100 ADSSL1Q8N142 457 aa12.61□□□□□ -0.39
LETMD1-221ENST00000550100 ZNF687Q8N1G0 1237 aa12.61□□□□□ -0.39
LETMD1-221ENST00000550100 OR6B3Q8NGW1 331 aa12.61□□□□□ -0.39
LETMD1-221ENST00000550100 MYCBPAPQ8TBZ2 947 aa12.61□□□□□ -0.39
LETMD1-221ENST00000550100 TAS1R2Q8TE23 839 aa12.61□□□□□ -0.39
LETMD1-221ENST00000550100 SEMA4DQ92854 862 aa12.61□□□□□ -0.39
LETMD1-221ENST00000550100 CCDC47Q96A33 483 aaKnown RBP12.61□□□□□ -0.39
LETMD1-221ENST00000550100 FAM122AQ96E09 287 aa12.61□□□□□ -0.39
LETMD1-221ENST00000550100 ZFYVE19Q96K21 471 aa12.61□□□□□ -0.39
LETMD1-221ENST00000550100 GSDMAQ96QA5 445 aa12.61□□□□□ -0.39
LETMD1-221ENST00000550100 SLC22A12Q96S37 553 aa12.61□□□□□ -0.39
LETMD1-221ENST00000550100 DDX23Q9BUQ8 820 aaKnown RBP12.61□□□□□ -0.39
LETMD1-221ENST00000550100 SNX25Q9H3E2 840 aa12.61□□□□□ -0.39
LETMD1-221ENST00000550100 HEBP1Q9NRV9 189 aa12.61□□□□□ -0.39
LETMD1-221ENST00000550100 CIZ1Q9ULV3 898 aaPredicted RBP12.61□□□□□ -0.39
LETMD1-221ENST00000550100 MAGED2Q9UNF1 606 aaPredicted RBP12.61□□□□□ -0.39
LETMD1-221ENST00000550100 CCL26Q9Y258 94 aa12.61□□□□□ -0.39
LETMD1-221ENST00000550100 FRMD4BQ9Y2L6 1034 aa12.61□□□□□ -0.39
LETMD1-221ENST00000550100 R3HCC1Q9Y3T6 440 aaKnown RBP12.61□□□□□ -0.39
LETMD1-221ENST00000550100 ZFHX2Q9C0A1 2572 aaPredicted RBP12.61□□□□□ -0.39
LETMD1-221ENST00000550100 ANAPC1Q9H1A4 1944 aa12.61□□□□□ -0.39
LETMD1-221ENST00000550100 STK25O00506 426 aa12.6□□□□□ -0.39
LETMD1-221ENST00000550100 IKBKBO14920 756 aa12.6□□□□□ -0.39
LETMD1-221ENST00000550100 MAPK13O15264 365 aa12.6□□□□□ -0.39
LETMD1-221ENST00000550100 GALR2O43603 387 aaPredicted RBP12.6□□□□□ -0.39
LETMD1-221ENST00000550100 GDI1P31150 447 aa12.6□□□□□ -0.39
LETMD1-221ENST00000550100 ASPAP45381 313 aa12.6□□□□□ -0.39
LETMD1-221ENST00000550100 TNNC1P63316 161 aa12.6□□□□□ -0.39
LETMD1-221ENST00000550100 CYP27A1Q02318 531 aa12.6□□□□□ -0.39
LETMD1-221ENST00000550100 MLF2Q15773 248 aaPredicted RBP12.6□□□□□ -0.39
LETMD1-221ENST00000550100 ZNF699Q32M78 642 aa12.6□□□□□ -0.39
LETMD1-221ENST00000550100 COBLL1Q53SF7 1204 aa12.6□□□□□ -0.39
LETMD1-221ENST00000550100 WDR44Q5JSH3 913 aa12.6□□□□□ -0.39
LETMD1-221ENST00000550100 PHLDB3Q6NSJ2 640 aa12.6□□□□□ -0.39
LETMD1-221ENST00000550100 MFSD6LQ8IWD5 586 aa12.6□□□□□ -0.39
LETMD1-221ENST00000550100 ZC3H3Q8IXZ2 948 aaKnown RBP12.6□□□□□ -0.39
LETMD1-221ENST00000550100 SMARCE1Q969G3 411 aa12.6□□□□□ -0.39
LETMD1-221ENST00000550100 SYAP1Q96A49 352 aaPredicted RBP12.6□□□□□ -0.39
LETMD1-221ENST00000550100 CYP2S1Q96SQ9 504 aa12.6□□□□□ -0.39
LETMD1-221ENST00000550100 ZNF518BQ9C0D4 1074 aa12.6□□□□□ -0.39
LETMD1-221ENST00000550100 KCNH6Q9H252 994 aa12.6□□□□□ -0.39
LETMD1-221ENST00000550100 SLITRK6Q9H5Y7 841 aa12.6□□□□□ -0.39
LETMD1-221ENST00000550100 TASP1Q9H6P5 420 aa12.6□□□□□ -0.39
LETMD1-221ENST00000550100 MMRN2Q9H8L6 949 aa12.6□□□□□ -0.39
LETMD1-221ENST00000550100 MAGEC2Q9UBF1 373 aaPredicted RBP12.6□□□□□ -0.39
LETMD1-221ENST00000550100 TICRRQ7Z2Z1 1910 aa12.6□□□□□ -0.39
LETMD1-221ENST00000550100 PPP1R3GB7ZBB8 358 aa12.59□□□□□ -0.39
LETMD1-221ENST00000550100 ASS1P00966 412 aaKnown RBP12.59□□□□□ -0.39
LETMD1-221ENST00000550100 FAM163BP0C2L3 166 aa12.59□□□□□ -0.39
LETMD1-221ENST00000550100 PSMC3P17980 439 aa12.59□□□□□ -0.39
LETMD1-221ENST00000550100 PSMC2P35998 433 aaKnown RBP12.59□□□□□ -0.39
LETMD1-221ENST00000550100 MAGEA11P43364 429 aa12.59□□□□□ -0.39
LETMD1-221ENST00000550100 AP3M2P53677 418 aa12.59□□□□□ -0.39
LETMD1-221ENST00000550100 VEPH1Q14D04 833 aa12.59□□□□□ -0.39
LETMD1-221ENST00000550100 EDRF1Q3B7T1 1238 aa12.59□□□□□ -0.39
LETMD1-221ENST00000550100 ZNF667Q5HYK9 610 aa12.59□□□□□ -0.39
LETMD1-221ENST00000550100 MAB21L3Q8N8X9 362 aa12.59□□□□□ -0.39
LETMD1-221ENST00000550100 DTWD2Q8NBA8 298 aa12.59□□□□□ -0.39
LETMD1-221ENST00000550100 B3GALNT2Q8NCR0 500 aa12.59□□□□□ -0.39
LETMD1-221ENST00000550100 FUBP3Q96I24 572 aaKnown RBP eCLIP12.59□□□□□ -0.39
LETMD1-221ENST00000550100 MYRFLQ96LU7 910 aa12.59□□□□□ -0.39
LETMD1-221ENST00000550100 TWNKQ96RR1 684 aa12.59□□□□□ -0.39
LETMD1-221ENST00000550100 DUSP9Q99956 384 aaKnown RBP12.59□□□□□ -0.39
LETMD1-221ENST00000550100 TRMT61BQ9BVS5 477 aaKnown RBP12.59□□□□□ -0.39
LETMD1-221ENST00000550100 ZNF638Q14966 1978 aaKnown RBP12.59□□□□□ -0.39
LETMD1-221ENST00000550100 A8MXQ7 604 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms