RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 PLEKHH3Q7Z736 793 aa9.41□□□□□ -0.9
TMEM116-209ENST00000550020 TADA2BQ86TJ2 420 aa9.41□□□□□ -0.9
TMEM116-209ENST00000550020 UNC93AQ86WB7 457 aa9.41□□□□□ -0.9
TMEM116-209ENST00000550020 VSIG1Q86XK7 387 aa9.41□□□□□ -0.9
TMEM116-209ENST00000550020 C10orf67Q8IYJ2 551 aa9.41□□□□□ -0.9
TMEM116-209ENST00000550020 WDTC1Q8N5D0 677 aa9.41□□□□□ -0.9
TMEM116-209ENST00000550020 LRRC52Q8N7C0 313 aa9.41□□□□□ -0.9
TMEM116-209ENST00000550020 SLC4A11Q8NBS3 891 aa9.41□□□□□ -0.9
TMEM116-209ENST00000550020 KCTD6Q8NC69 237 aa9.41□□□□□ -0.9
TMEM116-209ENST00000550020 CCDC197Q8NCU1 140 aa9.41□□□□□ -0.9
TMEM116-209ENST00000550020 BEST2Q8NFU1 509 aa9.41□□□□□ -0.9
TMEM116-209ENST00000550020 STK32AQ8WU08 396 aa9.41□□□□□ -0.9
TMEM116-209ENST00000550020 RSAD2Q8WXG1 361 aa9.41□□□□□ -0.9
TMEM116-209ENST00000550020 ARHGEF2Q92974 986 aaKnown RBP9.41□□□□□ -0.9
TMEM116-209ENST00000550020 MCRS1Q96EZ8 462 aa9.41□□□□□ -0.9
TMEM116-209ENST00000550020 FAM84AQ96KN4 292 aa9.41□□□□□ -0.9
TMEM116-209ENST00000550020 RBM15Q96T37 977 aaKnown RBP eCLIP9.41□□□□□ -0.9
TMEM116-209ENST00000550020 CNPY3Q9BT09 278 aa9.41□□□□□ -0.9
TMEM116-209ENST00000550020 PDGFCQ9NRA1 345 aa9.41□□□□□ -0.9
TMEM116-209ENST00000550020 NINJ2Q9NZG7 142 aa9.41□□□□□ -0.9
TMEM116-209ENST00000550020 HESX1Q9UBX0 185 aa9.41□□□□□ -0.9
TMEM116-209ENST00000550020 FETUBQ9UGM5 382 aa9.41□□□□□ -0.9
TMEM116-209ENST00000550020 SIX4Q9UIU6 781 aa9.41□□□□□ -0.9
TMEM116-209ENST00000550020 POLIQ9UNA4 740 aa9.41□□□□□ -0.9
TMEM116-209ENST00000550020 AGAP1Q9UPQ3 857 aa9.41□□□□□ -0.9
TMEM116-209ENST00000550020 R3HDM2Q9Y2K5 976 aaKnown RBP9.41□□□□□ -0.9
TMEM116-209ENST00000550020 NRCAMQ92823 1304 aa9.4□□□□□ -0.9
TMEM116-209ENST00000550020 CFAP69A5D8W1 941 aa9.4□□□□□ -0.9
TMEM116-209ENST00000550020 GLTPD2A6NH11 291 aa9.4□□□□□ -0.9
TMEM116-209ENST00000550020 PI4K2BG5E9Z4 385 aa9.4□□□□□ -0.9
TMEM116-209ENST00000550020 O00370 1275 aa9.4□□□□□ -0.9
TMEM116-209ENST00000550020 MCF2LO15068 1137 aa9.4□□□□□ -0.9
TMEM116-209ENST00000550020 ECM2O94769 699 aaPredicted RBP9.4□□□□□ -0.9
TMEM116-209ENST00000550020 CPP00450 1065 aa9.4□□□□□ -0.9
TMEM116-209ENST00000550020 ERBB2P04626 1255 aa9.4□□□□□ -0.9
TMEM116-209ENST00000550020 CYP2C8P10632 490 aa9.4□□□□□ -0.9
TMEM116-209ENST00000550020 GPD1P21695 349 aa9.4□□□□□ -0.9
TMEM116-209ENST00000550020 RFC1P35251 1148 aaPredicted RBP9.4□□□□□ -0.9
TMEM116-209ENST00000550020 SCNN1AP37088 669 aa9.4□□□□□ -0.9
TMEM116-209ENST00000550020 PNPLA4P41247 253 aa9.4□□□□□ -0.9
TMEM116-209ENST00000550020 ZNF143P52747 638 aaPredicted RBP9.4□□□□□ -0.9
TMEM116-209ENST00000550020 SEC24CP53992 1094 aa9.4□□□□□ -0.9
TMEM116-209ENST00000550020 ARL4CP56559 192 aa9.4□□□□□ -0.9
TMEM116-209ENST00000550020 SLC20A2Q08357 652 aa9.4□□□□□ -0.9
TMEM116-209ENST00000550020 GPS1Q13098 491 aa9.4□□□□□ -0.9
TMEM116-209ENST00000550020 TRIP13Q15645 432 aaPredicted RBP9.4□□□□□ -0.9
TMEM116-209ENST00000550020 TAZQ16635 292 aa9.4□□□□□ -0.9
TMEM116-209ENST00000550020 FAM110CQ1W6H9 321 aa9.4□□□□□ -0.9
TMEM116-209ENST00000550020 SLC10A6Q3KNW5 377 aa9.4□□□□□ -0.9
TMEM116-209ENST00000550020 TTC31Q49AM3 519 aaPredicted RBP9.4□□□□□ -0.9
TMEM116-209ENST00000550020 PTPN20Q4JDL3 420 aa9.4□□□□□ -0.9
TMEM116-209ENST00000550020 BOLA3Q53S33 107 aa9.4□□□□□ -0.9
TMEM116-209ENST00000550020 RNF187Q5TA31 235 aaPredicted RBP9.4□□□□□ -0.9
TMEM116-209ENST00000550020 CYP4A22Q5TCH4 519 aa9.4□□□□□ -0.9
TMEM116-209ENST00000550020 LLGL2Q6P1M3 1020 aa9.4□□□□□ -0.9
TMEM116-209ENST00000550020 SLC27A1Q6PCB7 646 aa9.4□□□□□ -0.9
TMEM116-209ENST00000550020 MOB2Q70IA6 237 aa9.4□□□□□ -0.9
TMEM116-209ENST00000550020 ANKS1BQ7Z6G8 1248 aa9.4□□□□□ -0.9
TMEM116-209ENST00000550020 SESTD1Q86VW0 696 aa9.4□□□□□ -0.9
TMEM116-209ENST00000550020 XYLT1Q86Y38 959 aa9.4□□□□□ -0.9
TMEM116-209ENST00000550020 TDRPQ86YL5 185 aa9.4□□□□□ -0.9
TMEM116-209ENST00000550020 PPIL6Q8IXY8 311 aa9.4□□□□□ -0.9
TMEM116-209ENST00000550020 OR6J1Q8NGC5 347 aa9.4□□□□□ -0.9
TMEM116-209ENST00000550020 SLC35B2Q8TB61 432 aa9.4□□□□□ -0.9
TMEM116-209ENST00000550020 EPS8L3Q8TE67 593 aaKnown RBP9.4□□□□□ -0.9
TMEM116-209ENST00000550020 GRAMD1AQ96CP6 724 aa9.4□□□□□ -0.9
TMEM116-209ENST00000550020 HAUS1Q96CS2 278 aa9.4□□□□□ -0.9
TMEM116-209ENST00000550020 KIF12Q96FN5 646 aa9.4□□□□□ -0.9
TMEM116-209ENST00000550020 SGSM3Q96HU1 749 aa9.4□□□□□ -0.9
TMEM116-209ENST00000550020 TBCBQ99426 244 aa9.4□□□□□ -0.9
TMEM116-209ENST00000550020 C16orf70Q9BSU1 422 aa9.4□□□□□ -0.9
TMEM116-209ENST00000550020 MINDY3Q9H8M7 445 aa9.4□□□□□ -0.9
TMEM116-209ENST00000550020 PRDM16Q9HAZ2 1276 aa9.4□□□□□ -0.9
TMEM116-209ENST00000550020 METTL5Q9NRN9 209 aaKnown RBP9.4□□□□□ -0.9
TMEM116-209ENST00000550020 SLC24A2Q9UI40 661 aa9.4□□□□□ -0.9
TMEM116-209ENST00000550020 DOCK5Q9H7D0 1870 aa9.39□□□□□ -0.91
TMEM116-209ENST00000550020 SMIM35A0A1B0GVV1 85 aa9.39□□□□□ -0.91
TMEM116-209ENST00000550020 ZNF487B1APH4 448 aa9.39□□□□□ -0.91
TMEM116-209ENST00000550020 H0YHG0 523 aa9.39□□□□□ -0.91
TMEM116-209ENST00000550020 APOC4-APOC2K7ER74 178 aa9.39□□□□□ -0.91
TMEM116-209ENST00000550020 DPYSL4O14531 572 aa9.39□□□□□ -0.91
TMEM116-209ENST00000550020 ALOX15BO15296 676 aa9.39□□□□□ -0.91
TMEM116-209ENST00000550020 PRPSAP2O60256 369 aa9.39□□□□□ -0.91
TMEM116-209ENST00000550020 LRCH4O75427 683 aa9.39□□□□□ -0.91
TMEM116-209ENST00000550020 SPAG6O75602 509 aa9.39□□□□□ -0.91
TMEM116-209ENST00000550020 FSBPO95073 299 aa9.39□□□□□ -0.91
TMEM116-209ENST00000550020 APOC2P02655 101 aa9.39□□□□□ -0.91
TMEM116-209ENST00000550020 MMP3P08254 477 aa9.39□□□□□ -0.91
TMEM116-209ENST00000550020 GHRP10912 638 aa9.39□□□□□ -0.91
TMEM116-209ENST00000550020 KRT10P13645 584 aa9.39□□□□□ -0.91
TMEM116-209ENST00000550020 ZFXP17010 805 aaPredicted RBP9.39□□□□□ -0.91
TMEM116-209ENST00000550020 KDELR1P24390 212 aa9.39□□□□□ -0.91
TMEM116-209ENST00000550020 GBP2P32456 591 aaPredicted RBP9.39□□□□□ -0.91
TMEM116-209ENST00000550020 SSTR3P32745 418 aaPredicted RBP9.39□□□□□ -0.91
TMEM116-209ENST00000550020 ADCYAP1R1P41586 468 aa9.39□□□□□ -0.91
TMEM116-209ENST00000550020 GPD2P43304 727 aa9.39□□□□□ -0.91
TMEM116-209ENST00000550020 SLCO1A2P46721 670 aa9.39□□□□□ -0.91
TMEM116-209ENST00000550020 VPS41P49754 854 aa9.39□□□□□ -0.91
TMEM116-209ENST00000550020 SLC18A1P54219 525 aa9.39□□□□□ -0.91
TMEM116-209ENST00000550020 SLC25A11Q02978 314 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms