RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 CFAP45Q9UL16 551 aa14.41□□□□□ -0.1
GCN1-206ENST00000549815 NME7Q9Y5B8 376 aa14.41□□□□□ -0.1
GCN1-206ENST00000549815 PCDHGA2Q9Y5H1 932 aa14.41□□□□□ -0.1
GCN1-206ENST00000549815 SLC38A8A6NNN8 435 aa14.4□□□□□ -0.1
GCN1-206ENST00000549815 SPECC1L-ADORA2AF8WAN1 911 aa14.4□□□□□ -0.1
GCN1-206ENST00000549815 DPYSL4O14531 572 aa14.4□□□□□ -0.1
GCN1-206ENST00000549815 KINO60870 393 aaKnown RBP14.4□□□□□ -0.1
GCN1-206ENST00000549815 ATP2C2O75185 946 aa14.4□□□□□ -0.1
GCN1-206ENST00000549815 WARSP23381 471 aaKnown RBP14.4□□□□□ -0.1
GCN1-206ENST00000549815 LMO2P25791 158 aa14.4□□□□□ -0.1
GCN1-206ENST00000549815 DDX6P26196 483 aaKnown RBP eCLIP14.4□□□□□ -0.1
GCN1-206ENST00000549815 PCSK1P29120 753 aa14.4□□□□□ -0.1
GCN1-206ENST00000549815 CTHP32929 405 aa14.4□□□□□ -0.1
GCN1-206ENST00000549815 RPL10AP62906 217 aaKnown RBP14.4□□□□□ -0.1
GCN1-206ENST00000549815 TNK2Q07912 1038 aa14.4□□□□□ -0.1
GCN1-206ENST00000549815 CYP24A1Q07973 514 aa14.4□□□□□ -0.1
GCN1-206ENST00000549815 MYO1EQ12965 1108 aa14.4□□□□□ -0.1
GCN1-206ENST00000549815 PSMD6Q15008 389 aa14.4□□□□□ -0.1
GCN1-206ENST00000549815 TAF12Q16514 161 aa14.4□□□□□ -0.1
GCN1-206ENST00000549815 C1orf228Q6PIY5 440 aa14.4□□□□□ -0.1
GCN1-206ENST00000549815 NELFCDQ8IXH7 590 aa14.4□□□□□ -0.1
GCN1-206ENST00000549815 GRAMD1CQ8IYS0 662 aa14.4□□□□□ -0.1
GCN1-206ENST00000549815 XXYLT1Q8NBI6 393 aa14.4□□□□□ -0.1
GCN1-206ENST00000549815 RDH13Q8NBN7 331 aa14.4□□□□□ -0.1
GCN1-206ENST00000549815 RIN3Q8TB24 985 aa14.4□□□□□ -0.1
GCN1-206ENST00000549815 ZNF516Q92618 1163 aa14.4□□□□□ -0.1
GCN1-206ENST00000549815 USP13Q92995 863 aaPredicted RBP14.4□□□□□ -0.1
GCN1-206ENST00000549815 TRMT2BQ96GJ1 504 aaKnown RBP14.4□□□□□ -0.1
GCN1-206ENST00000549815 FUBP3Q96I24 572 aaKnown RBP eCLIP14.4□□□□□ -0.1
GCN1-206ENST00000549815 GCNAQ96QF7 691 aa14.4□□□□□ -0.1
GCN1-206ENST00000549815 CGRRF1Q99675 332 aa14.4□□□□□ -0.1
GCN1-206ENST00000549815 SLC39A2Q9NP94 309 aa14.4□□□□□ -0.1
GCN1-206ENST00000549815 CRTAC1Q9NQ79 661 aa14.4□□□□□ -0.1
GCN1-206ENST00000549815 SERTAD1Q9UHV2 236 aa14.4□□□□□ -0.1
GCN1-206ENST00000549815 CCL26Q9Y258 94 aa14.4□□□□□ -0.1
GCN1-206ENST00000549815 ANAPC1Q9H1A4 1944 aa14.4□□□□□ -0.1
GCN1-206ENST00000549815 ZNF638Q14966 1978 aaKnown RBP14.4□□□□□ -0.1
GCN1-206ENST00000549815 ACTN4O43707 911 aaKnown RBP14.39□□□□□ -0.11
GCN1-206ENST00000549815 HSP90AA1P07900 732 aaKnown RBP14.39□□□□□ -0.11
GCN1-206ENST00000549815 MAGEA11P43364 429 aa14.39□□□□□ -0.11
GCN1-206ENST00000549815 AFMP43652 599 aa14.39□□□□□ -0.11
GCN1-206ENST00000549815 KPNA1P52294 538 aaPredicted RBP14.39□□□□□ -0.11
GCN1-206ENST00000549815 PLCB2Q00722 1185 aa14.39□□□□□ -0.11
GCN1-206ENST00000549815 TXNDC8Q6A555 127 aa14.39□□□□□ -0.11
GCN1-206ENST00000549815 MON1AQ86VX9 555 aa14.39□□□□□ -0.11
GCN1-206ENST00000549815 RALGPS2Q86X27 583 aaPredicted RBP14.39□□□□□ -0.11
GCN1-206ENST00000549815 SPATA2LQ8IUW3 424 aaPredicted RBP14.39□□□□□ -0.11
GCN1-206ENST00000549815 MAB21L3Q8N8X9 362 aa14.39□□□□□ -0.11
GCN1-206ENST00000549815 SPRYD3Q8NCJ5 442 aa14.39□□□□□ -0.11
GCN1-206ENST00000549815 TTC8Q8TAM2 541 aa14.39□□□□□ -0.11
GCN1-206ENST00000549815 PLEKHO2Q8TD55 490 aa14.39□□□□□ -0.11
GCN1-206ENST00000549815 CHFRQ96EP1 664 aa14.39□□□□□ -0.11
GCN1-206ENST00000549815 FAM83CQ9BQN1 747 aa14.39□□□□□ -0.11
GCN1-206ENST00000549815 SYT15Q9BQS2 421 aa14.39□□□□□ -0.11
GCN1-206ENST00000549815 MRPL45Q9BRJ2 306 aaKnown RBP14.39□□□□□ -0.11
GCN1-206ENST00000549815 RBM12Q9NTZ6 932 aaKnown RBP14.39□□□□□ -0.11
GCN1-206ENST00000549815 CDH9Q9ULB4 789 aa14.39□□□□□ -0.11
GCN1-206ENST00000549815 MAGED2Q9UNF1 606 aaPredicted RBP14.39□□□□□ -0.11
GCN1-206ENST00000549815 ZDHHC9Q9Y397 364 aa14.39□□□□□ -0.11
GCN1-206ENST00000549815 TACC1O75410 805 aa14.38□□□□□ -0.11
GCN1-206ENST00000549815 STAU1O95793 577 aaKnown RBP14.38□□□□□ -0.11
GCN1-206ENST00000549815 FAM163BP0C2L3 166 aa14.38□□□□□ -0.11
GCN1-206ENST00000549815 SLFN14P0C7P3 912 aa14.38□□□□□ -0.11
GCN1-206ENST00000549815 DLATP10515 647 aaKnown RBP14.38□□□□□ -0.11
GCN1-206ENST00000549815 CYP2J2P51589 502 aa14.38□□□□□ -0.11
GCN1-206ENST00000549815 PSMC1P62191 440 aaKnown RBP14.38□□□□□ -0.11
GCN1-206ENST00000549815 STK4Q13043 487 aa14.38□□□□□ -0.11
GCN1-206ENST00000549815 ZNF268Q14587 947 aaPredicted RBP14.38□□□□□ -0.11
GCN1-206ENST00000549815 KNOP1Q1ED39 458 aaKnown RBP14.38□□□□□ -0.11
GCN1-206ENST00000549815 DCLK2Q8N568 766 aa14.38□□□□□ -0.11
GCN1-206ENST00000549815 KIAA0895Q8NCT3 520 aa14.38□□□□□ -0.11
GCN1-206ENST00000549815 TMEM174Q8WUU8 243 aa14.38□□□□□ -0.11
GCN1-206ENST00000549815 RUBCNQ92622 972 aa14.38□□□□□ -0.11
GCN1-206ENST00000549815 MYLPFQ96A32 169 aa14.38□□□□□ -0.11
GCN1-206ENST00000549815 CCDC127Q96BQ5 260 aa14.38□□□□□ -0.11
GCN1-206ENST00000549815 FAM126AQ9BYI3 521 aaPredicted RBP14.38□□□□□ -0.11
GCN1-206ENST00000549815 EPC1Q9H2F5 836 aa14.38□□□□□ -0.11
GCN1-206ENST00000549815 KIF9Q9HAQ2 790 aa14.38□□□□□ -0.11
GCN1-206ENST00000549815 HPS4Q9NQG7 708 aa14.38□□□□□ -0.11
GCN1-206ENST00000549815 CGNQ9P2M7 1197 aaKnown RBP14.38□□□□□ -0.11
GCN1-206ENST00000549815 UXTQ9UBK9 157 aaPredicted RBP14.38□□□□□ -0.11
GCN1-206ENST00000549815 HPSEQ9Y251 543 aa14.38□□□□□ -0.11
GCN1-206ENST00000549815 OTOL1A6NHN0 477 aaPredicted RBP14.37□□□□□ -0.11
GCN1-206ENST00000549815 PAPSS2O95340 614 aaPredicted RBP14.37□□□□□ -0.11
GCN1-206ENST00000549815 TNNI1P19237 187 aa14.37□□□□□ -0.11
GCN1-206ENST00000549815 AVPR1AP37288 418 aa14.37□□□□□ -0.11
GCN1-206ENST00000549815 CCR3P51677 355 aa14.37□□□□□ -0.11
GCN1-206ENST00000549815 SATB1Q01826 763 aa14.37□□□□□ -0.11
GCN1-206ENST00000549815 CCINQ13939 588 aa14.37□□□□□ -0.11
GCN1-206ENST00000549815 LRRC32Q14392 662 aa14.37□□□□□ -0.11
GCN1-206ENST00000549815 ITPRIPL2Q3MIP1 535 aa14.37□□□□□ -0.11
GCN1-206ENST00000549815 C4orf50Q6ZRC1 276 aa14.37□□□□□ -0.11
GCN1-206ENST00000549815 Q6ZS52 159 aa14.37□□□□□ -0.11
GCN1-206ENST00000549815 HS2ST1Q7LGA3 356 aa14.37□□□□□ -0.11
GCN1-206ENST00000549815 SCN4BQ8IWT1 228 aa14.37□□□□□ -0.11
GCN1-206ENST00000549815 SPEM1Q8N4L4 309 aa14.37□□□□□ -0.11
GCN1-206ENST00000549815 ATRIPQ8WXE1 791 aa14.37□□□□□ -0.11
GCN1-206ENST00000549815 MRPS31Q92665 395 aaKnown RBP14.37□□□□□ -0.11
GCN1-206ENST00000549815 PAGE5Q96GU1 130 aa14.37□□□□□ -0.11
GCN1-206ENST00000549815 CHAMP1Q96JM3 812 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms