RNA–Protein interactions for RNA: ENST00000549414.6

CUX1-213, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-213ENST00000549414 BRSK2Q8IWQ3 736 aa17.01■□□□□ 0.31
CUX1-213ENST00000549414 SGSM3Q96HU1 749 aa17.01■□□□□ 0.31
CUX1-213ENST00000549414 INPP4AQ96PE3 977 aaPredicted RBP17.01■□□□□ 0.31
CUX1-213ENST00000549414 SAE1Q9UBE0 346 aaPredicted RBP17.01■□□□□ 0.31
CUX1-213ENST00000549414 BCAP29Q9UHQ4 241 aa17.01■□□□□ 0.31
CUX1-213ENST00000549414 IGLV3-22A0A075B6J6 115 aa17.01■□□□□ 0.31
CUX1-213ENST00000549414 PFDN6O15212 129 aa17.01■□□□□ 0.31
CUX1-213ENST00000549414 TBC1D12O60347 775 aa17.01■□□□□ 0.31
CUX1-213ENST00000549414 MX2P20592 715 aa17.01■□□□□ 0.31
CUX1-213ENST00000549414 YY1P25490 414 aa17.01■□□□□ 0.31
CUX1-213ENST00000549414 TAF6P49848 677 aa17.01■□□□□ 0.31
CUX1-213ENST00000549414 BMT2Q1RMZ1 405 aa17.01■□□□□ 0.31
CUX1-213ENST00000549414 ZCWPW2Q504Y3 356 aa17.01■□□□□ 0.31
CUX1-213ENST00000549414 SPATA24Q86W54 205 aa17.01■□□□□ 0.31
CUX1-213ENST00000549414 ALG3Q92685 438 aa17.01■□□□□ 0.31
CUX1-213ENST00000549414 TMEM176AQ96HP8 235 aa17.01■□□□□ 0.31
CUX1-213ENST00000549414 TSR3Q9UJK0 312 aaKnown RBP17.01■□□□□ 0.31
CUX1-213ENST00000549414 BAZ2AQ9UIF9 1905 aaKnown RBP17■□□□□ 0.31
CUX1-213ENST00000549414 SPECC1L-ADORA2AF8WAN1 911 aa17■□□□□ 0.31
CUX1-213ENST00000549414 EEF2KO00418 725 aaKnown RBP17■□□□□ 0.31
CUX1-213ENST00000549414 VDRP11473 427 aa17■□□□□ 0.31
CUX1-213ENST00000549414 STX1BP61266 288 aa17■□□□□ 0.31
CUX1-213ENST00000549414 KDSRQ06136 332 aa17■□□□□ 0.31
CUX1-213ENST00000549414 SKIV2LQ15477 1246 aaKnown RBP17■□□□□ 0.31
CUX1-213ENST00000549414 BOLA3Q53S33 107 aa17■□□□□ 0.31
CUX1-213ENST00000549414 PARP9Q8IXQ6 854 aa17■□□□□ 0.31
CUX1-213ENST00000549414 CCDC124Q96CT7 223 aaKnown RBP17■□□□□ 0.31
CUX1-213ENST00000549414 GBP5Q96PP8 586 aa17■□□□□ 0.31
CUX1-213ENST00000549414 TTYH3Q9C0H2 523 aa17■□□□□ 0.31
CUX1-213ENST00000549414 USP18Q9UMW8 372 aa17■□□□□ 0.31
CUX1-213ENST00000549414 NDST1P52848 882 aa17■□□□□ 0.31
CUX1-213ENST00000549414 COG7P83436 770 aa17■□□□□ 0.31
CUX1-213ENST00000549414 PLCB4Q15147 1175 aa17■□□□□ 0.31
CUX1-213ENST00000549414 TRIM67Q6ZTA4 783 aa17■□□□□ 0.31
CUX1-213ENST00000549414 PRUNE1Q86TP1 453 aa17■□□□□ 0.31
CUX1-213ENST00000549414 FBXO36Q8NEA4 188 aa17■□□□□ 0.31
CUX1-213ENST00000549414 FAM161BQ96MY7 647 aa17■□□□□ 0.31
CUX1-213ENST00000549414 TSSK1BQ9BXA7 367 aa17■□□□□ 0.31
CUX1-213ENST00000549414 GPRC5DQ9NZD1 345 aa17■□□□□ 0.31
CUX1-213ENST00000549414 PRG3Q9Y2Y8 225 aaPredicted RBP17■□□□□ 0.31
CUX1-213ENST00000549414 M0QYT0 321 aa17■□□□□ 0.31
CUX1-213ENST00000549414 ZSCAN5DPP0CG00 497 aa17■□□□□ 0.31
CUX1-213ENST00000549414 ADCYAP1R1P41586 468 aa17■□□□□ 0.31
CUX1-213ENST00000549414 FMO1Q01740 532 aa17■□□□□ 0.31
CUX1-213ENST00000549414 C1QBPQ07021 282 aaKnown RBP17■□□□□ 0.31
CUX1-213ENST00000549414 ART3Q13508 389 aa17■□□□□ 0.31
CUX1-213ENST00000549414 CEP120Q8N960 986 aa17■□□□□ 0.31
CUX1-213ENST00000549414 N4BP2L2Q92802 583 aaPredicted RBP17■□□□□ 0.31
CUX1-213ENST00000549414 SEMA4DQ92854 862 aa17■□□□□ 0.31
CUX1-213ENST00000549414 TMEM106CQ9BVX2 250 aa17■□□□□ 0.31
CUX1-213ENST00000549414 NOP53Q9NZM5 478 aaKnown RBP17■□□□□ 0.31
CUX1-213ENST00000549414 UBQLN1Q9UMX0 589 aaKnown RBP17■□□□□ 0.31
CUX1-213ENST00000549414 LRRC37A3O60309 1634 aa17■□□□□ 0.31
CUX1-213ENST00000549414 SNED1Q8TER0 1413 aa17■□□□□ 0.31
CUX1-213ENST00000549414 RRN3P2A6NIE6 340 aa17■□□□□ 0.31
CUX1-213ENST00000549414 TRIM49D1C9J1S8 452 aa17■□□□□ 0.31
CUX1-213ENST00000549414 PPFIA2O75334 1257 aa17■□□□□ 0.31
CUX1-213ENST00000549414 RAB44Q7Z6P3 723 aaPredicted RBP17■□□□□ 0.31
CUX1-213ENST00000549414 FAM71AQ8IYT1 594 aa17■□□□□ 0.31
CUX1-213ENST00000549414 SHC3Q92529 594 aa17■□□□□ 0.31
CUX1-213ENST00000549414 SERPINB12Q96P63 405 aa17■□□□□ 0.31
CUX1-213ENST00000549414 DCLK3Q9C098 648 aa17■□□□□ 0.31
CUX1-213ENST00000549414 TIMM13Q9Y5L4 95 aaPredicted RBP17■□□□□ 0.31
CUX1-213ENST00000549414 B3GAT3O94766 335 aa16.99■□□□□ 0.31
CUX1-213ENST00000549414 GCKP35557 465 aa16.99■□□□□ 0.31
CUX1-213ENST00000549414 JAG1P78504 1218 aa16.99■□□□□ 0.31
CUX1-213ENST00000549414 RBBP5Q15291 538 aaKnown RBP16.99■□□□□ 0.31
CUX1-213ENST00000549414 CCNG2Q16589 344 aa16.99■□□□□ 0.31
CUX1-213ENST00000549414 TDRD10Q5VZ19 366 aaKnown RBP16.99■□□□□ 0.31
CUX1-213ENST00000549414 ICE2Q659A1 982 aa16.99■□□□□ 0.31
CUX1-213ENST00000549414 ITPRIPL1Q6GPH6 555 aa16.99■□□□□ 0.31
CUX1-213ENST00000549414 WHRNQ9P202 907 aa16.99■□□□□ 0.31
CUX1-213ENST00000549414 DNPEPQ9ULA0 475 aa16.99■□□□□ 0.31
CUX1-213ENST00000549414 LACTBL1A8MY62 500 aa16.99■□□□□ 0.31
CUX1-213ENST00000549414 ACKR2O00590 384 aa16.99■□□□□ 0.31
CUX1-213ENST00000549414 SYF2O95926 243 aaKnown RBP16.99■□□□□ 0.31
CUX1-213ENST00000549414 ADORA2AP29274 412 aa16.99■□□□□ 0.31
CUX1-213ENST00000549414 HSD17B4P51659 736 aa16.99■□□□□ 0.31
CUX1-213ENST00000549414 OCRLQ01968 901 aa16.99■□□□□ 0.31
CUX1-213ENST00000549414 RRP1BQ14684 758 aaKnown RBP16.99■□□□□ 0.31
CUX1-213ENST00000549414 POTEAQ6S8J7 498 aa16.99■□□□□ 0.31
CUX1-213ENST00000549414 SLC9A9Q8IVB4 645 aa16.99■□□□□ 0.31
CUX1-213ENST00000549414 GPC2Q8N158 579 aa16.99■□□□□ 0.31
CUX1-213ENST00000549414 NDUFAF2Q8N183 169 aa16.99■□□□□ 0.31
CUX1-213ENST00000549414 HASPINQ8TF76 798 aa16.99■□□□□ 0.31
CUX1-213ENST00000549414 DDIT4Q9NX09 232 aa16.99■□□□□ 0.31
CUX1-213ENST00000549414 TSPAN16Q9UKR8 245 aa16.99■□□□□ 0.31
CUX1-213ENST00000549414 PDHXO00330 501 aa16.99■□□□□ 0.31
CUX1-213ENST00000549414 STK25O00506 426 aa16.99■□□□□ 0.31
CUX1-213ENST00000549414 SV2CQ496J9 727 aa16.99■□□□□ 0.31
CUX1-213ENST00000549414 TTMPQ5BVD1 217 aa16.99■□□□□ 0.31
CUX1-213ENST00000549414 SPATA2LQ8IUW3 424 aaPredicted RBP16.99■□□□□ 0.31
CUX1-213ENST00000549414 ZSWIM2Q8NEG5 633 aa16.99■□□□□ 0.31
CUX1-213ENST00000549414 LRRC15Q8TF66 581 aa16.99■□□□□ 0.31
CUX1-213ENST00000549414 TUBB6Q9BUF5 446 aa16.99■□□□□ 0.31
CUX1-213ENST00000549414 FOXP3Q9BZS1 431 aa16.99■□□□□ 0.31
CUX1-213ENST00000549414 ABCF3Q9NUQ8 709 aa16.99■□□□□ 0.31
CUX1-213ENST00000549414 MID2Q9UJV3 735 aa16.99■□□□□ 0.31
CUX1-213ENST00000549414 CCT8L1PA6NM43 557 aa16.98■□□□□ 0.31
CUX1-213ENST00000549414 TTC4O95801 387 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms