RNA–Protein interactions for RNA: ENST00000549341.1

DEPDC4-208, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 541 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-208ENST00000549341 CATSPER4Q7RTX7 472 aa7.65□□□□□ -1.18
DEPDC4-208ENST00000549341 HAUS6Q7Z4H7 955 aa7.65□□□□□ -1.18
DEPDC4-208ENST00000549341 IRF2BP1Q8IU81 584 aa7.65□□□□□ -1.18
DEPDC4-208ENST00000549341 SLC9A9Q8IVB4 645 aa7.65□□□□□ -1.18
DEPDC4-208ENST00000549341 ZBTB8OSQ8IWT0 167 aa7.65□□□□□ -1.18
DEPDC4-208ENST00000549341 C12orf56Q8IXR9 622 aa7.65□□□□□ -1.18
DEPDC4-208ENST00000549341 FAM186BQ8IYM0 893 aa7.65□□□□□ -1.18
DEPDC4-208ENST00000549341 NEK11Q8NG66 645 aa7.65□□□□□ -1.18
DEPDC4-208ENST00000549341 ING5Q8WYH8 240 aa7.65□□□□□ -1.18
DEPDC4-208ENST00000549341 RSPH1Q8WYR4 309 aa7.65□□□□□ -1.18
DEPDC4-208ENST00000549341 BICD1Q96G01 975 aa7.65□□□□□ -1.18
DEPDC4-208ENST00000549341 BORCS6Q96GS4 357 aa7.65□□□□□ -1.18
DEPDC4-208ENST00000549341 NLRP4Q96MN2 994 aa7.65□□□□□ -1.18
DEPDC4-208ENST00000549341 ERGIC2Q96RQ1 377 aa7.65□□□□□ -1.18
DEPDC4-208ENST00000549341 BAG1Q99933 345 aaPredicted RBP7.65□□□□□ -1.18
DEPDC4-208ENST00000549341 GCOM2Q9BZD3 368 aaPredicted RBP7.65□□□□□ -1.18
DEPDC4-208ENST00000549341 EDEM3Q9BZQ6 932 aa7.65□□□□□ -1.18
DEPDC4-208ENST00000549341 POLR3FQ9H1D9 316 aaPredicted RBP7.65□□□□□ -1.18
DEPDC4-208ENST00000549341 C2orf40Q9H1Z8 148 aa7.65□□□□□ -1.18
DEPDC4-208ENST00000549341 RSAD1Q9HA92 442 aa7.65□□□□□ -1.18
DEPDC4-208ENST00000549341 KIAA1586Q9HCI6 787 aa7.65□□□□□ -1.18
DEPDC4-208ENST00000549341 ASH1LQ9NR48 2969 aaKnown RBP7.65□□□□□ -1.18
DEPDC4-208ENST00000549341 HEBP1Q9NRV9 189 aa7.65□□□□□ -1.18
DEPDC4-208ENST00000549341 ZDHHC7Q9NXF8 308 aa7.65□□□□□ -1.18
DEPDC4-208ENST00000549341 LUC7L2Q9Y383 392 aaKnown RBP7.65□□□□□ -1.18
DEPDC4-208ENST00000549341 DAAM1Q9Y4D1 1078 aa7.65□□□□□ -1.18
DEPDC4-208ENST00000549341 MYH11P35749 1972 aa7.64□□□□□ -1.19
DEPDC4-208ENST00000549341 BPTFQ12830 3046 aa7.64□□□□□ -1.19
DEPDC4-208ENST00000549341 A0A087WZ62 844 aa7.64□□□□□ -1.19
DEPDC4-208ENST00000549341 A0A1W2PQJ5 194 aa7.64□□□□□ -1.19
DEPDC4-208ENST00000549341 NRP1O14786 923 aa7.64□□□□□ -1.19
DEPDC4-208ENST00000549341 MAPK13O15264 365 aa7.64□□□□□ -1.19
DEPDC4-208ENST00000549341 SLC16A4O15374 487 aa7.64□□□□□ -1.19
DEPDC4-208ENST00000549341 NCAM2O15394 837 aa7.64□□□□□ -1.19
DEPDC4-208ENST00000549341 CCL16O15467 120 aa7.64□□□□□ -1.19
DEPDC4-208ENST00000549341 TEX33O43247 280 aa7.64□□□□□ -1.19
DEPDC4-208ENST00000549341 LRP3O75074 770 aa7.64□□□□□ -1.19
DEPDC4-208ENST00000549341 SKIP12755 728 aa7.64□□□□□ -1.19
DEPDC4-208ENST00000549341 SPINK2P20155 84 aa7.64□□□□□ -1.19
DEPDC4-208ENST00000549341 PBX1P40424 430 aa7.64□□□□□ -1.19
DEPDC4-208ENST00000549341 GRM5P41594 1212 aa7.64□□□□□ -1.19
DEPDC4-208ENST00000549341 CASP5P51878 434 aa7.64□□□□□ -1.19
DEPDC4-208ENST00000549341 EFNA5P52803 228 aa7.64□□□□□ -1.19
DEPDC4-208ENST00000549341 SHC2P98077 582 aa7.64□□□□□ -1.19
DEPDC4-208ENST00000549341 CDC42EP1Q00587 391 aa7.64□□□□□ -1.19
DEPDC4-208ENST00000549341 MAPK7Q13164 816 aa7.64□□□□□ -1.19
DEPDC4-208ENST00000549341 PPP2R5DQ14738 602 aa7.64□□□□□ -1.19
DEPDC4-208ENST00000549341 TCERG1LQ5VWI1 586 aa7.64□□□□□ -1.19
DEPDC4-208ENST00000549341 ZNF385CQ66K41 422 aaPredicted RBP7.64□□□□□ -1.19
DEPDC4-208ENST00000549341 HEATR6Q6AI08 1181 aaKnown RBP7.64□□□□□ -1.19
DEPDC4-208ENST00000549341 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.64□□□□□ -1.19
DEPDC4-208ENST00000549341 INTS8Q75QN2 995 aaKnown RBP7.64□□□□□ -1.19
DEPDC4-208ENST00000549341 APTXQ7Z2E3 356 aaKnown RBP7.64□□□□□ -1.19
DEPDC4-208ENST00000549341 CACNA2D4Q7Z3S7 1137 aa7.64□□□□□ -1.19
DEPDC4-208ENST00000549341 TMTC1Q8IUR5 882 aa7.64□□□□□ -1.19
DEPDC4-208ENST00000549341 DAW1Q8N136 415 aa7.64□□□□□ -1.19
DEPDC4-208ENST00000549341 TXLNBQ8N3L3 684 aa7.64□□□□□ -1.19
DEPDC4-208ENST00000549341 LINC01465Q8N7H1 131 aa7.64□□□□□ -1.19
DEPDC4-208ENST00000549341 C12orf50Q8NA57 414 aaPredicted RBP7.64□□□□□ -1.19
DEPDC4-208ENST00000549341 XXYLT1Q8NBI6 393 aa7.64□□□□□ -1.19
DEPDC4-208ENST00000549341 CACTINQ8WUQ7 758 aaKnown RBP7.64□□□□□ -1.19
DEPDC4-208ENST00000549341 TMEM174Q8WUU8 243 aa7.64□□□□□ -1.19
DEPDC4-208ENST00000549341 PSPC1Q8WXF1 523 aaKnown RBP7.64□□□□□ -1.19
DEPDC4-208ENST00000549341 NELL1Q92832 810 aa7.64□□□□□ -1.19
DEPDC4-208ENST00000549341 FGF13Q92913 245 aa7.64□□□□□ -1.19
DEPDC4-208ENST00000549341 PGBD4Q96DM1 585 aa7.64□□□□□ -1.19
DEPDC4-208ENST00000549341 SCARF2Q96GP6 870 aaPredicted RBP7.64□□□□□ -1.19
DEPDC4-208ENST00000549341 ZNF830Q96NB3 372 aaPredicted RBP7.64□□□□□ -1.19
DEPDC4-208ENST00000549341 FDXACB1Q9BRP7 624 aaPredicted RBP7.64□□□□□ -1.19
DEPDC4-208ENST00000549341 TMEM175Q9BSA9 504 aa7.64□□□□□ -1.19
DEPDC4-208ENST00000549341 NTPCRQ9BSD7 190 aaKnown RBP7.64□□□□□ -1.19
DEPDC4-208ENST00000549341 FAM126AQ9BYI3 521 aaPredicted RBP7.64□□□□□ -1.19
DEPDC4-208ENST00000549341 RHOBTB2Q9BYZ6 727 aa7.64□□□□□ -1.19
DEPDC4-208ENST00000549341 OSBPL6Q9BZF3 934 aa7.64□□□□□ -1.19
DEPDC4-208ENST00000549341 PLEKHA4Q9H4M7 779 aa7.64□□□□□ -1.19
DEPDC4-208ENST00000549341 DHX33Q9H6R0 707 aaKnown RBP7.64□□□□□ -1.19
DEPDC4-208ENST00000549341 MMRN2Q9H8L6 949 aa7.64□□□□□ -1.19
DEPDC4-208ENST00000549341 CHST12Q9NRB3 414 aa7.64□□□□□ -1.19
DEPDC4-208ENST00000549341 AGPAT3Q9NRZ7 376 aa7.64□□□□□ -1.19
DEPDC4-208ENST00000549341 INTS13Q9NVM9 706 aa7.64□□□□□ -1.19
DEPDC4-208ENST00000549341 TBX20Q9UMR3 447 aa7.64□□□□□ -1.19
DEPDC4-208ENST00000549341 SSX2IPQ9Y2D8 614 aa7.64□□□□□ -1.19
DEPDC4-208ENST00000549341 MRPS17Q9Y2R5 130 aaKnown RBP7.64□□□□□ -1.19
DEPDC4-208ENST00000549341 PCDHB2Q9Y5E7 798 aa7.64□□□□□ -1.19
DEPDC4-208ENST00000549341 LRRIQ4A6NIV6 560 aa7.63□□□□□ -1.19
DEPDC4-208ENST00000549341 CHURC1-FNTBB4DL54 471 aa7.63□□□□□ -1.19
DEPDC4-208ENST00000549341 K7ERI5 159 aa7.63□□□□□ -1.19
DEPDC4-208ENST00000549341 CLIC2O15247 247 aa7.63□□□□□ -1.19
DEPDC4-208ENST00000549341 MFAP3LO75121 409 aa7.63□□□□□ -1.19
DEPDC4-208ENST00000549341 MAFO75444 373 aaPredicted RBP7.63□□□□□ -1.19
DEPDC4-208ENST00000549341 STBD1O95210 358 aa7.63□□□□□ -1.19
DEPDC4-208ENST00000549341 LDHAP00338 332 aaKnown RBP7.63□□□□□ -1.19
DEPDC4-208ENST00000549341 ALDH2P05091 517 aa7.63□□□□□ -1.19
DEPDC4-208ENST00000549341 TDGF1P13385 188 aa7.63□□□□□ -1.19
DEPDC4-208ENST00000549341 GARTP22102 1010 aa7.63□□□□□ -1.19
DEPDC4-208ENST00000549341 KRT9P35527 623 aa7.63□□□□□ -1.19
DEPDC4-208ENST00000549341 MLH1P40692 756 aa7.63□□□□□ -1.19
DEPDC4-208ENST00000549341 RPS9P46781 194 aaKnown RBP7.63□□□□□ -1.19
DEPDC4-208ENST00000549341 NPTX2P47972 431 aa7.63□□□□□ -1.19
DEPDC4-208ENST00000549341 FNTBP49356 437 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms