RNA–Protein interactions for RNA: ENST00000549336.5

VDR-206, Transcript of vitamin D receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VDR, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-206ENST00000549336 C4orf22Q6V702 233 aa12.23□□□□□ -0.45
VDR-206ENST00000549336 SYDE1Q6ZW31 735 aaPredicted RBP12.23□□□□□ -0.45
VDR-206ENST00000549336 PYROXD1Q8WU10 500 aa12.23□□□□□ -0.45
VDR-206ENST00000549336 LENG9Q96B70 501 aa12.23□□□□□ -0.45
VDR-206ENST00000549336 RNPC3Q96LT9 517 aaKnown RBP12.23□□□□□ -0.45
VDR-206ENST00000549336 FMO2Q99518 471 aa12.23□□□□□ -0.45
VDR-206ENST00000549336 HES2Q9Y543 173 aa12.23□□□□□ -0.45
VDR-206ENST00000549336 SLX4Q8IY92 1834 aa12.23□□□□□ -0.45
VDR-206ENST00000549336 F5H5T6 163 aa12.23□□□□□ -0.45
VDR-206ENST00000549336 B4GALT5O43286 388 aa12.23□□□□□ -0.45
VDR-206ENST00000549336 S100BP04271 92 aaPredicted RBP12.23□□□□□ -0.45
VDR-206ENST00000549336 CLTBP09497 229 aa12.23□□□□□ -0.45
VDR-206ENST00000549336 ENPEPQ07075 957 aa12.23□□□□□ -0.45
VDR-206ENST00000549336 LENG1Q96BZ8 264 aaPredicted RBP12.23□□□□□ -0.45
VDR-206ENST00000549336 THG1LQ9NWX6 298 aaKnown RBP12.23□□□□□ -0.45
VDR-206ENST00000549336 DFFAO00273 331 aa12.23□□□□□ -0.45
VDR-206ENST00000549336 SNAI1O95863 264 aaPredicted RBP12.23□□□□□ -0.45
VDR-206ENST00000549336 HPDP32754 393 aaPredicted RBP12.23□□□□□ -0.45
VDR-206ENST00000549336 RAP1GAPP47736 663 aa12.23□□□□□ -0.45
VDR-206ENST00000549336 P3H1Q32P28 736 aa12.23□□□□□ -0.45
VDR-206ENST00000549336 PID1Q7Z2X4 250 aa12.23□□□□□ -0.45
VDR-206ENST00000549336 TOP6BLQ8N6T0 577 aa12.23□□□□□ -0.45
VDR-206ENST00000549336 ZNF557Q8N988 423 aaPredicted RBP12.23□□□□□ -0.45
VDR-206ENST00000549336 PDZD8Q8NEN9 1154 aa12.23□□□□□ -0.45
VDR-206ENST00000549336 PDCD6IPQ8WUM4 868 aaKnown RBP12.23□□□□□ -0.45
VDR-206ENST00000549336 SKA2Q8WVK7 121 aaPredicted RBP12.23□□□□□ -0.45
VDR-206ENST00000549336 C18orf25Q96B23 403 aaPredicted RBP12.23□□□□□ -0.45
VDR-206ENST00000549336 MFSD14AQ96MC6 490 aa12.23□□□□□ -0.45
VDR-206ENST00000549336 MUC3BQ9H195 1237 aa12.23□□□□□ -0.45
VDR-206ENST00000549336 SIPA1L3O60292 1781 aaPredicted RBP12.23□□□□□ -0.45
VDR-206ENST00000549336 PAPPAQ13219 1627 aa12.23□□□□□ -0.45
VDR-206ENST00000549336 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.23□□□□□ -0.45
VDR-206ENST00000549336 DNM1LO00429 736 aa12.23□□□□□ -0.45
VDR-206ENST00000549336 NFICP08651 508 aa12.23□□□□□ -0.45
VDR-206ENST00000549336 CYP3A5P20815 502 aa12.23□□□□□ -0.45
VDR-206ENST00000549336 RFC2P35250 354 aa12.23□□□□□ -0.45
VDR-206ENST00000549336 EIF3EP60228 445 aaKnown RBP12.23□□□□□ -0.45
VDR-206ENST00000549336 ASPHQ12797 758 aa12.23□□□□□ -0.45
VDR-206ENST00000549336 ZNF177Q13360 481 aaPredicted RBP12.23□□□□□ -0.45
VDR-206ENST00000549336 DHX34Q14147 1143 aaKnown RBP12.23□□□□□ -0.45
VDR-206ENST00000549336 LRRC55Q6ZSA7 311 aa12.23□□□□□ -0.45
VDR-206ENST00000549336 HERC6Q8IVU3 1022 aa12.23□□□□□ -0.45
VDR-206ENST00000549336 SLC4A1P02730 911 aa12.22□□□□□ -0.45
VDR-206ENST00000549336 PFKMP08237 780 aa12.22□□□□□ -0.45
VDR-206ENST00000549336 MMEP08473 750 aa12.22□□□□□ -0.45
VDR-206ENST00000549336 IRF1P10914 325 aa12.22□□□□□ -0.45
VDR-206ENST00000549336 CDH18Q13634 790 aa12.22□□□□□ -0.45
VDR-206ENST00000549336 SETDB1Q15047 1291 aa12.22□□□□□ -0.45
VDR-206ENST00000549336 PREPLQ4J6C6 727 aaPredicted RBP12.22□□□□□ -0.45
VDR-206ENST00000549336 IL31Q6EBC2 164 aa12.22□□□□□ -0.45
VDR-206ENST00000549336 C7orf61Q8IZ16 206 aa12.22□□□□□ -0.45
VDR-206ENST00000549336 ATL2Q8NHH9 583 aa12.22□□□□□ -0.45
VDR-206ENST00000549336 SPATA20Q8TB22 786 aa12.22□□□□□ -0.45
VDR-206ENST00000549336 PPP1R13LQ8WUF5 828 aa12.22□□□□□ -0.45
VDR-206ENST00000549336 KRT35Q92764 455 aa12.22□□□□□ -0.45
VDR-206ENST00000549336 NUDCD1Q96RS6 583 aa12.22□□□□□ -0.45
VDR-206ENST00000549336 FBXL5Q9UKA1 691 aa12.22□□□□□ -0.45
VDR-206ENST00000549336 EDNRBP24530 442 aa12.22□□□□□ -0.45
VDR-206ENST00000549336 MSH2P43246 934 aa12.22□□□□□ -0.45
VDR-206ENST00000549336 OXCT1P55809 520 aa12.22□□□□□ -0.45
VDR-206ENST00000549336 PURAQ00577 322 aaKnown RBP12.22□□□□□ -0.45
VDR-206ENST00000549336 PDK2Q15119 407 aa12.22□□□□□ -0.45
VDR-206ENST00000549336 CEP85LQ5SZL2 805 aa12.22□□□□□ -0.45
VDR-206ENST00000549336 CCDC13Q8IYE1 715 aa12.22□□□□□ -0.45
VDR-206ENST00000549336 SMC6Q96SB8 1091 aa12.22□□□□□ -0.45
VDR-206ENST00000549336 KCTD10Q9H3F6 313 aa12.22□□□□□ -0.45
VDR-206ENST00000549336 TLK1Q9UKI8 766 aa12.22□□□□□ -0.45
VDR-206ENST00000549336 ALG6Q9Y672 507 aa12.22□□□□□ -0.45
VDR-206ENST00000549336 DHX15O43143 795 aaKnown RBP12.22□□□□□ -0.45
VDR-206ENST00000549336 TSPAN1O60635 241 aa12.22□□□□□ -0.45
VDR-206ENST00000549336 PTPN1P18031 435 aaKnown RBP12.22□□□□□ -0.45
VDR-206ENST00000549336 PAPOLAP51003 745 aaKnown RBP12.22□□□□□ -0.45
VDR-206ENST00000549336 ZNF211Q13398 564 aaPredicted RBP12.22□□□□□ -0.45
VDR-206ENST00000549336 CAPN12Q6ZSI9 719 aa12.22□□□□□ -0.45
VDR-206ENST00000549336 PPP4R1Q8TF05 950 aa12.22□□□□□ -0.45
VDR-206ENST00000549336 HSFY1Q96LI6 401 aa12.22□□□□□ -0.45
VDR-206ENST00000549336 DCLK3Q9C098 648 aa12.22□□□□□ -0.45
VDR-206ENST00000549336 VPS18Q9P253 973 aa12.22□□□□□ -0.45
VDR-206ENST00000549336 MID2Q9UJV3 735 aa12.22□□□□□ -0.45
VDR-206ENST00000549336 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.22□□□□□ -0.45
VDR-206ENST00000549336 ARHGAP42A6NI28 874 aa12.22□□□□□ -0.45
VDR-206ENST00000549336 PSTPIP1O43586 416 aa12.22□□□□□ -0.45
VDR-206ENST00000549336 COL6A1P12109 1028 aa12.22□□□□□ -0.45
VDR-206ENST00000549336 MYL4P12829 197 aa12.22□□□□□ -0.45
VDR-206ENST00000549336 PSEN1P49768 467 aa12.22□□□□□ -0.45
VDR-206ENST00000549336 C2orf54Q08AI8 447 aa12.22□□□□□ -0.45
VDR-206ENST00000549336 CLEC16AQ2KHT3 1053 aa12.22□□□□□ -0.45
VDR-206ENST00000549336 SLC35G1Q2M3R5 365 aa12.22□□□□□ -0.45
VDR-206ENST00000549336 SLC39A12Q504Y0 691 aa12.22□□□□□ -0.45
VDR-206ENST00000549336 RNF187Q5TA31 235 aaPredicted RBP12.22□□□□□ -0.45
VDR-206ENST00000549336 MIB1Q86YT6 1006 aa12.22□□□□□ -0.45
VDR-206ENST00000549336 NPAS4Q8IUM7 802 aa12.22□□□□□ -0.45
VDR-206ENST00000549336 USP13Q92995 863 aaPredicted RBP12.22□□□□□ -0.45
VDR-206ENST00000549336 RPRD1AQ96P16 312 aaPredicted RBP12.22□□□□□ -0.45
VDR-206ENST00000549336 A0A087X0T9 212 aa12.21□□□□□ -0.45
VDR-206ENST00000549336 ADRB2P07550 413 aa12.21□□□□□ -0.45
VDR-206ENST00000549336 FAM228BP0C875 321 aa12.21□□□□□ -0.45
VDR-206ENST00000549336 EPHB2P29323 1055 aa12.21□□□□□ -0.45
VDR-206ENST00000549336 ZNF135P52742 658 aaPredicted RBP12.21□□□□□ -0.45
VDR-206ENST00000549336 PPP3CAQ08209 521 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms