RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 RPL10AP62906 217 aaKnown RBP16.84■□□□□ 0.29
DDX54-205ENST00000548786 MORC3Q14149 939 aa16.84■□□□□ 0.29
DDX54-205ENST00000548786 SGSM1Q2NKQ1 1148 aa16.84■□□□□ 0.29
DDX54-205ENST00000548786 COBLL1Q53SF7 1204 aa16.84■□□□□ 0.29
DDX54-205ENST00000548786 C4orf50Q6ZRC1 276 aa16.84■□□□□ 0.29
DDX54-205ENST00000548786 BMP8AQ7Z5Y6 402 aa16.84■□□□□ 0.29
DDX54-205ENST00000548786 ELOA2Q8IYF1 753 aaPredicted RBP16.84■□□□□ 0.29
DDX54-205ENST00000548786 NELFBQ8WX92 580 aa16.84■□□□□ 0.29
DDX54-205ENST00000548786 SMARCD2Q92925 531 aa16.84■□□□□ 0.29
DDX54-205ENST00000548786 ASB16Q96NS5 453 aa16.84■□□□□ 0.29
DDX54-205ENST00000548786 GCNAQ96QF7 691 aa16.84■□□□□ 0.29
DDX54-205ENST00000548786 ABCB6Q9NP58 842 aa16.84■□□□□ 0.29
DDX54-205ENST00000548786 HMGXB4Q9UGU5 601 aa16.84■□□□□ 0.29
DDX54-205ENST00000548786 KRBA1A5PL33 1030 aa16.83■□□□□ 0.28
DDX54-205ENST00000548786 SLC38A8A6NNN8 435 aa16.83■□□□□ 0.28
DDX54-205ENST00000548786 PPP1R3GB7ZBB8 358 aa16.83■□□□□ 0.28
DDX54-205ENST00000548786 CLDN5O00501 218 aa16.83■□□□□ 0.28
DDX54-205ENST00000548786 NCANO14594 1321 aa16.83■□□□□ 0.28
DDX54-205ENST00000548786 MICAL2O94851 1124 aa16.83■□□□□ 0.28
DDX54-205ENST00000548786 ASS1P00966 412 aaKnown RBP16.83■□□□□ 0.28
DDX54-205ENST00000548786 P4HA1P13674 534 aa16.83■□□□□ 0.28
DDX54-205ENST00000548786 CCNE1P24864 410 aa16.83■□□□□ 0.28
DDX54-205ENST00000548786 GRIK1P39086 918 aa16.83■□□□□ 0.28
DDX54-205ENST00000548786 ASPAP45381 313 aa16.83■□□□□ 0.28
DDX54-205ENST00000548786 FKBP3Q00688 224 aaKnown RBP16.83■□□□□ 0.28
DDX54-205ENST00000548786 LRRC63Q05C16 580 aa16.83■□□□□ 0.28
DDX54-205ENST00000548786 CFAP221Q4G0U5 840 aa16.83■□□□□ 0.28
DDX54-205ENST00000548786 B3GALNT2Q8NCR0 500 aa16.83■□□□□ 0.28
DDX54-205ENST00000548786 MYCBPAPQ8TBZ2 947 aa16.83■□□□□ 0.28
DDX54-205ENST00000548786 MKNK1Q9BUB5 465 aa16.83■□□□□ 0.28
DDX54-205ENST00000548786 IMPG2Q9BZV3 1241 aa16.83■□□□□ 0.28
DDX54-205ENST00000548786 ZNF518BQ9C0D4 1074 aa16.83■□□□□ 0.28
DDX54-205ENST00000548786 SMG9Q9H0W8 520 aaKnown RBP16.83■□□□□ 0.28
DDX54-205ENST00000548786 VRTNQ9H8Y1 702 aa16.83■□□□□ 0.28
DDX54-205ENST00000548786 IL21Q9HBE4 155 aa16.83■□□□□ 0.28
DDX54-205ENST00000548786 APOBEC3GQ9HC16 384 aaKnown RBP16.83■□□□□ 0.28
DDX54-205ENST00000548786 ZFP14Q9HCL3 533 aa16.83■□□□□ 0.28
DDX54-205ENST00000548786 TMEM8AQ9HCN3 771 aa16.83■□□□□ 0.28
DDX54-205ENST00000548786 SLC16A3O15427 465 aaKnown RBP16.82■□□□□ 0.28
DDX54-205ENST00000548786 ECI2O75521 394 aa16.82■□□□□ 0.28
DDX54-205ENST00000548786 HMGA1P17096 107 aaKnown RBP16.82■□□□□ 0.28
DDX54-205ENST00000548786 CD58P19256 250 aa16.82■□□□□ 0.28
DDX54-205ENST00000548786 CDC25CP30307 473 aa16.82■□□□□ 0.28
DDX54-205ENST00000548786 MXI1P50539 228 aa16.82■□□□□ 0.28
DDX54-205ENST00000548786 CACNA2D1P54289 1103 aa16.82■□□□□ 0.28
DDX54-205ENST00000548786 NOP14P78316 857 aaKnown RBP16.82■□□□□ 0.28
DDX54-205ENST00000548786 MAPRE1Q15691 268 aaKnown RBP16.82■□□□□ 0.28
DDX54-205ENST00000548786 ARHGAP15Q53QZ3 475 aa16.82■□□□□ 0.28
DDX54-205ENST00000548786 ACOT1Q86TX2 421 aa16.82■□□□□ 0.28
DDX54-205ENST00000548786 SEMA4DQ92854 862 aa16.82■□□□□ 0.28
DDX54-205ENST00000548786 ELSPBP1Q96BH3 223 aa16.82■□□□□ 0.28
DDX54-205ENST00000548786 RSPRY1Q96DX4 576 aa16.82■□□□□ 0.28
DDX54-205ENST00000548786 DHTKD1Q96HY7 919 aaPredicted RBP16.82■□□□□ 0.28
DDX54-205ENST00000548786 FUBP3Q96I24 572 aaKnown RBP eCLIP16.82■□□□□ 0.28
DDX54-205ENST00000548786 MED10Q9BTT4 135 aa16.82■□□□□ 0.28
DDX54-205ENST00000548786 B3GNT5Q9BYG0 378 aa16.82■□□□□ 0.28
DDX54-205ENST00000548786 GTPBP4Q9BZE4 634 aaKnown RBP16.82■□□□□ 0.28
DDX54-205ENST00000548786 ARHGEF3Q9NR81 526 aa16.82■□□□□ 0.28
DDX54-205ENST00000548786 KMT2EQ8IZD2 1858 aa16.82■□□□□ 0.28
DDX54-205ENST00000548786 ZNF318Q5VUA4 2279 aa16.81■□□□□ 0.28
DDX54-205ENST00000548786 F8VP50 259 aa16.81■□□□□ 0.28
DDX54-205ENST00000548786 FGF19O95750 216 aa16.81■□□□□ 0.28
DDX54-205ENST00000548786 CSH1P0DML2 217 aa16.81■□□□□ 0.28
DDX54-205ENST00000548786 CSH2P0DML3 217 aa16.81■□□□□ 0.28
DDX54-205ENST00000548786 CCDC130P13994 396 aa16.81■□□□□ 0.28
DDX54-205ENST00000548786 NPR3P17342 541 aa16.81■□□□□ 0.28
DDX54-205ENST00000548786 ANXA13P27216 316 aa16.81■□□□□ 0.28
DDX54-205ENST00000548786 NDST1P52848 882 aa16.81■□□□□ 0.28
DDX54-205ENST00000548786 NLRP12P59046 1061 aa16.81■□□□□ 0.28
DDX54-205ENST00000548786 IFRD2Q12894 506 aaPredicted RBP16.81■□□□□ 0.28
DDX54-205ENST00000548786 CCDC40Q4G0X9 1142 aa16.81■□□□□ 0.28
DDX54-205ENST00000548786 CBWD6Q4V339 395 aa16.81■□□□□ 0.28
DDX54-205ENST00000548786 CBWD3Q5JTY5 395 aa16.81■□□□□ 0.28
DDX54-205ENST00000548786 CBWD5Q5RIA9 395 aa16.81■□□□□ 0.28
DDX54-205ENST00000548786 CWF19L1Q69YN2 538 aaKnown RBP16.81■□□□□ 0.28
DDX54-205ENST00000548786 KRT39Q6A163 491 aa16.81■□□□□ 0.28
DDX54-205ENST00000548786 VITQ6UXI7 678 aa16.81■□□□□ 0.28
DDX54-205ENST00000548786 TMEM150AQ86TG1 271 aa16.81■□□□□ 0.28
DDX54-205ENST00000548786 ARID3BQ8IVW6 561 aaPredicted RBP16.81■□□□□ 0.28
DDX54-205ENST00000548786 ZC3H3Q8IXZ2 948 aaKnown RBP16.81■□□□□ 0.28
DDX54-205ENST00000548786 TMEM105Q8N8V8 129 aa16.81■□□□□ 0.28
DDX54-205ENST00000548786 CCDC150Q8NCX0 1101 aa16.81■□□□□ 0.28
DDX54-205ENST00000548786 TTC16Q8NEE8 873 aa16.81■□□□□ 0.28
DDX54-205ENST00000548786 TAF4BQ92750 862 aa16.81■□□□□ 0.28
DDX54-205ENST00000548786 DUSP9Q99956 384 aaKnown RBP16.81■□□□□ 0.28
DDX54-205ENST00000548786 TBC1D17Q9HA65 648 aa16.81■□□□□ 0.28
DDX54-205ENST00000548786 TRPC7Q9HCX4 862 aa16.81■□□□□ 0.28
DDX54-205ENST00000548786 SLC2A4RGQ9NR83 387 aa16.81■□□□□ 0.28
DDX54-205ENST00000548786 FAM49BQ9NUQ9 324 aa16.81■□□□□ 0.28
DDX54-205ENST00000548786 TMEM30AQ9NV96 361 aa16.81■□□□□ 0.28
DDX54-205ENST00000548786 WNT16Q9UBV4 365 aa16.81■□□□□ 0.28
DDX54-205ENST00000548786 ARMCX3Q9UH62 379 aaPredicted RBP16.81■□□□□ 0.28
DDX54-205ENST00000548786 MUC6Q6W4X9 2439 aa16.81■□□□□ 0.28
DDX54-205ENST00000548786 PTPRDP23468 1912 aa16.8■□□□□ 0.28
DDX54-205ENST00000548786 HEPACAM2A8MVW5 462 aa16.8■□□□□ 0.28
DDX54-205ENST00000548786 PI15O43692 258 aa16.8■□□□□ 0.28
DDX54-205ENST00000548786 PRAMEF12O95522 483 aa16.8■□□□□ 0.28
DDX54-205ENST00000548786 AVPR2P30518 371 aa16.8■□□□□ 0.28
DDX54-205ENST00000548786 GDI1P31150 447 aa16.8■□□□□ 0.28
DDX54-205ENST00000548786 MAGEA11P43364 429 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms