RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 CCINQ13939 588 aa18.66■□□□□ 0.58
CHMP1A-205ENST00000548650 PPP2R5DQ14738 602 aa18.66■□□□□ 0.58
CHMP1A-205ENST00000548650 DDR2Q16832 855 aa18.66■□□□□ 0.58
CHMP1A-205ENST00000548650 FOXD4L5Q5VV16 416 aaPredicted RBP18.66■□□□□ 0.58
CHMP1A-205ENST00000548650 WDR49Q8IV35 697 aa18.66■□□□□ 0.58
CHMP1A-205ENST00000548650 MAB21L3Q8N8X9 362 aa18.66■□□□□ 0.58
CHMP1A-205ENST00000548650 IQUBQ8NA54 791 aa18.66■□□□□ 0.58
CHMP1A-205ENST00000548650 ZNF507Q8TCN5 953 aa18.66■□□□□ 0.58
CHMP1A-205ENST00000548650 FOXD4L4Q8WXT5 416 aaPredicted RBP18.66■□□□□ 0.58
CHMP1A-205ENST00000548650 C7orf25Q9BPX7 421 aa18.66■□□□□ 0.58
CHMP1A-205ENST00000548650 KIF9Q9HAQ2 790 aa18.66■□□□□ 0.58
CHMP1A-205ENST00000548650 MAGEF1Q9HAY2 307 aa18.66■□□□□ 0.58
CHMP1A-205ENST00000548650 HPS4Q9NQG7 708 aa18.66■□□□□ 0.58
CHMP1A-205ENST00000548650 MAGED2Q9UNF1 606 aaPredicted RBP18.66■□□□□ 0.58
CHMP1A-205ENST00000548650 MYO16Q9Y6X6 1858 aa18.66■□□□□ 0.58
CHMP1A-205ENST00000548650 SOBPA7XYQ1 873 aa18.65■□□□□ 0.58
CHMP1A-205ENST00000548650 TNNC2P02585 160 aa18.65■□□□□ 0.58
CHMP1A-205ENST00000548650 CXCL12P48061 93 aa18.65■□□□□ 0.58
CHMP1A-205ENST00000548650 NRLP54845 237 aa18.65■□□□□ 0.58
CHMP1A-205ENST00000548650 AMPD3Q01432 767 aa18.65■□□□□ 0.58
CHMP1A-205ENST00000548650 MYO1EQ12965 1108 aa18.65■□□□□ 0.58
CHMP1A-205ENST00000548650 PON2Q15165 354 aa18.65■□□□□ 0.58
CHMP1A-205ENST00000548650 SURF1Q15526 300 aa18.65■□□□□ 0.58
CHMP1A-205ENST00000548650 ITPRIPL2Q3MIP1 535 aa18.65■□□□□ 0.58
CHMP1A-205ENST00000548650 DGKKQ5KSL6 1271 aa18.65■□□□□ 0.58
CHMP1A-205ENST00000548650 TXNDC8Q6A555 127 aa18.65■□□□□ 0.58
CHMP1A-205ENST00000548650 UNC13DQ70J99 1090 aa18.65■□□□□ 0.58
CHMP1A-205ENST00000548650 MON1AQ86VX9 555 aa18.65■□□□□ 0.58
CHMP1A-205ENST00000548650 MRPS31Q92665 395 aaKnown RBP18.65■□□□□ 0.58
CHMP1A-205ENST00000548650 CHFRQ96EP1 664 aa18.65■□□□□ 0.58
CHMP1A-205ENST00000548650 FUBP3Q96I24 572 aaKnown RBP eCLIP18.65■□□□□ 0.58
CHMP1A-205ENST00000548650 HPDLQ96IR7 371 aa18.65■□□□□ 0.58
CHMP1A-205ENST00000548650 MYRFLQ96LU7 910 aa18.65■□□□□ 0.58
CHMP1A-205ENST00000548650 FAM83CQ9BQN1 747 aa18.65■□□□□ 0.58
CHMP1A-205ENST00000548650 THG1LQ9NWX6 298 aaKnown RBP18.65■□□□□ 0.58
CHMP1A-205ENST00000548650 K7ESF4 209 aa18.64■□□□□ 0.57
CHMP1A-205ENST00000548650 F13A1P00488 732 aa18.64■□□□□ 0.57
CHMP1A-205ENST00000548650 ZSCAN22P10073 491 aaPredicted RBP18.64■□□□□ 0.57
CHMP1A-205ENST00000548650 CASP1P29466 404 aa18.64■□□□□ 0.57
CHMP1A-205ENST00000548650 PSMC1P62191 440 aaKnown RBP18.64■□□□□ 0.57
CHMP1A-205ENST00000548650 SNRNP35Q16560 246 aaKnown RBP18.64■□□□□ 0.57
CHMP1A-205ENST00000548650 DUOXA2Q1HG44 320 aa18.64■□□□□ 0.57
CHMP1A-205ENST00000548650 FAM171BQ6P995 826 aa18.64■□□□□ 0.57
CHMP1A-205ENST00000548650 DPH6Q7L8W6 267 aa18.64■□□□□ 0.57
CHMP1A-205ENST00000548650 SPATA2LQ8IUW3 424 aaPredicted RBP18.64■□□□□ 0.57
CHMP1A-205ENST00000548650 SCFD1Q8WVM8 642 aa18.64■□□□□ 0.57
CHMP1A-205ENST00000548650 SYT15Q9BQS2 421 aa18.64■□□□□ 0.57
CHMP1A-205ENST00000548650 KIAA1586Q9HCI6 787 aa18.64■□□□□ 0.57
CHMP1A-205ENST00000548650 TDP1Q9NUW8 608 aa18.64■□□□□ 0.57
CHMP1A-205ENST00000548650 C2orf42Q9NWW7 574 aa18.64■□□□□ 0.57
CHMP1A-205ENST00000548650 UXTQ9UBK9 157 aaPredicted RBP18.64■□□□□ 0.57
CHMP1A-205ENST00000548650 OTOL1A6NHN0 477 aaPredicted RBP18.63■□□□□ 0.57
CHMP1A-205ENST00000548650 ATP2C2O75185 946 aa18.63■□□□□ 0.57
CHMP1A-205ENST00000548650 MAGEA11P43364 429 aa18.63■□□□□ 0.57
CHMP1A-205ENST00000548650 DMWDQ09019 674 aa18.63■□□□□ 0.57
CHMP1A-205ENST00000548650 ZNF268Q14587 947 aaPredicted RBP18.63■□□□□ 0.57
CHMP1A-205ENST00000548650 BMT2Q1RMZ1 405 aa18.63■□□□□ 0.57
CHMP1A-205ENST00000548650 FOXD4L6Q3SYB3 417 aaPredicted RBP18.63■□□□□ 0.57
CHMP1A-205ENST00000548650 TRIM68Q6AZZ1 485 aa18.63■□□□□ 0.57
CHMP1A-205ENST00000548650 FOXD4L3Q6VB84 417 aaPredicted RBP18.63■□□□□ 0.57
CHMP1A-205ENST00000548650 HSCBQ8IWL3 235 aa18.63■□□□□ 0.57
CHMP1A-205ENST00000548650 NELFCDQ8IXH7 590 aa18.63■□□□□ 0.57
CHMP1A-205ENST00000548650 MYLPFQ96A32 169 aa18.63■□□□□ 0.57
CHMP1A-205ENST00000548650 CGRRF1Q99675 332 aa18.63■□□□□ 0.57
CHMP1A-205ENST00000548650 GZF1Q9H116 711 aaPredicted RBP18.63■□□□□ 0.57
CHMP1A-205ENST00000548650 BLZF1Q9H2G9 400 aa18.63■□□□□ 0.57
CHMP1A-205ENST00000548650 CRTAC1Q9NQ79 661 aa18.63■□□□□ 0.57
CHMP1A-205ENST00000548650 GKN1Q9NS71 199 aa18.63■□□□□ 0.57
CHMP1A-205ENST00000548650 POLR2DO15514 142 aaKnown RBP18.62■□□□□ 0.57
CHMP1A-205ENST00000548650 WARSP23381 471 aaKnown RBP18.62■□□□□ 0.57
CHMP1A-205ENST00000548650 LMO2P25791 158 aa18.62■□□□□ 0.57
CHMP1A-205ENST00000548650 CYP2J2P51589 502 aa18.62■□□□□ 0.57
CHMP1A-205ENST00000548650 CYP24A1Q07973 514 aa18.62■□□□□ 0.57
CHMP1A-205ENST00000548650 USP4Q13107 963 aa18.62■□□□□ 0.57
CHMP1A-205ENST00000548650 RUNX3Q13761 415 aa18.62■□□□□ 0.57
CHMP1A-205ENST00000548650 PKP1Q13835 747 aa18.62■□□□□ 0.57
CHMP1A-205ENST00000548650 PSMD6Q15008 389 aa18.62■□□□□ 0.57
CHMP1A-205ENST00000548650 RESP18Q5W5W9 173 aa18.62■□□□□ 0.57
CHMP1A-205ENST00000548650 C4orf50Q6ZRC1 276 aa18.62■□□□□ 0.57
CHMP1A-205ENST00000548650 TRAPPC11Q7Z392 1133 aa18.62■□□□□ 0.57
CHMP1A-205ENST00000548650 SCN4BQ8IWT1 228 aa18.62■□□□□ 0.57
CHMP1A-205ENST00000548650 SLC22A12Q96S37 553 aa18.62■□□□□ 0.57
CHMP1A-205ENST00000548650 EBF3Q9H4W6 596 aa18.62■□□□□ 0.57
CHMP1A-205ENST00000548650 DLL3Q9NYJ7 618 aa18.62■□□□□ 0.57
CHMP1A-205ENST00000548650 CDH9Q9ULB4 789 aa18.62■□□□□ 0.57
CHMP1A-205ENST00000548650 PCDHA7Q9UN72 937 aa18.62■□□□□ 0.57
CHMP1A-205ENST00000548650 R3HCC1Q9Y3T6 440 aaKnown RBP18.62■□□□□ 0.57
CHMP1A-205ENST00000548650 NME7Q9Y5B8 376 aa18.62■□□□□ 0.57
CHMP1A-205ENST00000548650 EML5Q05BV3 1969 aa18.62■□□□□ 0.57
CHMP1A-205ENST00000548650 NCOR2Q9Y618 2525 aa18.61■□□□□ 0.57
CHMP1A-205ENST00000548650 SPAG17Q6Q759 2223 aa18.61■□□□□ 0.57
CHMP1A-205ENST00000548650 ATG2BQ96BY7 2078 aa18.61■□□□□ 0.57
CHMP1A-205ENST00000548650 CHURC1-FNTBB4DL54 471 aa18.61■□□□□ 0.57
CHMP1A-205ENST00000548650 CLIC2O15247 247 aa18.61■□□□□ 0.57
CHMP1A-205ENST00000548650 DLATP10515 647 aaKnown RBP18.61■□□□□ 0.57
CHMP1A-205ENST00000548650 ARSAP15289 507 aa18.61■□□□□ 0.57
CHMP1A-205ENST00000548650 FNTBP49356 437 aa18.61■□□□□ 0.57
CHMP1A-205ENST00000548650 ZNF77Q15935 545 aa18.61■□□□□ 0.57
CHMP1A-205ENST00000548650 TMEM196Q5HYL7 178 aa18.61■□□□□ 0.57
CHMP1A-205ENST00000548650 FSTL4Q6MZW2 842 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms