RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 GLUD2P49448 558 aa18.39■□□□□ 0.53
RBFOX1-207ENST00000547338 HADHBP55084 474 aaKnown RBP18.39■□□□□ 0.53
RBFOX1-207ENST00000547338 CCNI2Q6ZMN8 369 aaPredicted RBP18.39■□□□□ 0.53
RBFOX1-207ENST00000547338 APBB1IPQ7Z5R6 666 aaPredicted RBP18.39■□□□□ 0.53
RBFOX1-207ENST00000547338 ADHFE1Q8IWW8 467 aa18.39■□□□□ 0.53
RBFOX1-207ENST00000547338 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.39■□□□□ 0.53
RBFOX1-207ENST00000547338 MFSD14AQ96MC6 490 aa18.39■□□□□ 0.53
RBFOX1-207ENST00000547338 TCHPQ9BT92 498 aa18.39■□□□□ 0.53
RBFOX1-207ENST00000547338 APOL5Q9BWW9 433 aa18.39■□□□□ 0.53
RBFOX1-207ENST00000547338 RXFP1Q9HBX9 757 aa18.39■□□□□ 0.53
RBFOX1-207ENST00000547338 STK39Q9UEW8 545 aa18.39■□□□□ 0.53
RBFOX1-207ENST00000547338 DDX3XO00571 662 aaKnown RBP eCLIP18.38■□□□□ 0.53
RBFOX1-207ENST00000547338 TEX28O15482 410 aa18.38■□□□□ 0.53
RBFOX1-207ENST00000547338 KCNE1P15382 129 aa18.38■□□□□ 0.53
RBFOX1-207ENST00000547338 CLCN4P51793 760 aa18.38■□□□□ 0.53
RBFOX1-207ENST00000547338 UPP1Q16831 310 aa18.38■□□□□ 0.53
RBFOX1-207ENST00000547338 RTP2Q5QGT7 225 aa18.38■□□□□ 0.53
RBFOX1-207ENST00000547338 ENOSF1Q7L5Y1 443 aa18.38■□□□□ 0.53
RBFOX1-207ENST00000547338 EIF1ADQ8N9N8 165 aaKnown RBP18.38■□□□□ 0.53
RBFOX1-207ENST00000547338 C18orf25Q96B23 403 aaPredicted RBP18.38■□□□□ 0.53
RBFOX1-207ENST00000547338 ACAP3Q96P50 834 aa18.38■□□□□ 0.53
RBFOX1-207ENST00000547338 MRPL17Q9NRX2 175 aaKnown RBP18.38■□□□□ 0.53
RBFOX1-207ENST00000547338 PRKAG3Q9UGI9 489 aa18.38■□□□□ 0.53
RBFOX1-207ENST00000547338 A0A0B4J269 797 aa18.37■□□□□ 0.53
RBFOX1-207ENST00000547338 ANKRD62A6NC57 917 aa18.37■□□□□ 0.53
RBFOX1-207ENST00000547338 HNRNPDLO14979 420 aaKnown RBP18.37■□□□□ 0.53
RBFOX1-207ENST00000547338 ZNF185O15231 689 aa18.37■□□□□ 0.53
RBFOX1-207ENST00000547338 CLDN3O15551 220 aa18.37■□□□□ 0.53
RBFOX1-207ENST00000547338 SASH3O75995 380 aa18.37■□□□□ 0.53
RBFOX1-207ENST00000547338 URODP06132 367 aa18.37■□□□□ 0.53
RBFOX1-207ENST00000547338 CXCL8P10145 99 aa18.37■□□□□ 0.53
RBFOX1-207ENST00000547338 MXI1P50539 228 aa18.37■□□□□ 0.53
RBFOX1-207ENST00000547338 CLCNKBP51801 687 aa18.37■□□□□ 0.53
RBFOX1-207ENST00000547338 MFAP3P55082 362 aa18.37■□□□□ 0.53
RBFOX1-207ENST00000547338 KRT39Q6A163 491 aa18.37■□□□□ 0.53
RBFOX1-207ENST00000547338 GJD3Q8N144 294 aa18.37■□□□□ 0.53
RBFOX1-207ENST00000547338 C12orf76Q8N812 135 aaPredicted RBP18.37■□□□□ 0.53
RBFOX1-207ENST00000547338 LRRC57Q8N9N7 239 aa18.37■□□□□ 0.53
RBFOX1-207ENST00000547338 COG1Q8WTW3 980 aa18.37■□□□□ 0.53
RBFOX1-207ENST00000547338 CASP10Q92851 521 aa18.37■□□□□ 0.53
RBFOX1-207ENST00000547338 CBWD1Q9BRT8 395 aa18.37■□□□□ 0.53
RBFOX1-207ENST00000547338 TMEM8AQ9HCN3 771 aa18.37■□□□□ 0.53
RBFOX1-207ENST00000547338 MED4Q9NPJ6 270 aa18.37■□□□□ 0.53
RBFOX1-207ENST00000547338 TOPORSQ9NS56 1045 aaPredicted RBP18.37■□□□□ 0.53
RBFOX1-207ENST00000547338 NCANO14594 1321 aa18.37■□□□□ 0.53
RBFOX1-207ENST00000547338 TMEM189-UBE2V1I3L0A0 370 aa18.36■□□□□ 0.53
RBFOX1-207ENST00000547338 TRIM49P0CI25 452 aa18.36■□□□□ 0.53
RBFOX1-207ENST00000547338 TRIM49CP0CI26 452 aa18.36■□□□□ 0.53
RBFOX1-207ENST00000547338 GZMAP12544 262 aa18.36■□□□□ 0.53
RBFOX1-207ENST00000547338 HOXB8P17481 243 aaPredicted RBP18.36■□□□□ 0.53
RBFOX1-207ENST00000547338 NOP2P46087 812 aaKnown RBP18.36■□□□□ 0.53
RBFOX1-207ENST00000547338 SNRNP35Q16560 246 aaKnown RBP18.36■□□□□ 0.53
RBFOX1-207ENST00000547338 SLFN12LQ6IEE8 588 aa18.36■□□□□ 0.53
RBFOX1-207ENST00000547338 PHLDB3Q6NSJ2 640 aa18.36■□□□□ 0.53
RBFOX1-207ENST00000547338 RHOT2Q8IXI1 618 aa18.36■□□□□ 0.53
RBFOX1-207ENST00000547338 TPCN2Q8NHX9 752 aa18.36■□□□□ 0.53
RBFOX1-207ENST00000547338 ACTRT1Q8TDG2 376 aa18.36■□□□□ 0.53
RBFOX1-207ENST00000547338 PARD3BQ8TEW8 1205 aa18.36■□□□□ 0.53
RBFOX1-207ENST00000547338 CTNNBL1Q8WYA6 563 aaPredicted RBP18.36■□□□□ 0.53
RBFOX1-207ENST00000547338 BICD1Q96G01 975 aa18.36■□□□□ 0.53
RBFOX1-207ENST00000547338 GPR88Q9GZN0 384 aa18.36■□□□□ 0.53
RBFOX1-207ENST00000547338 PCIF1Q9H4Z3 704 aa18.36■□□□□ 0.53
RBFOX1-207ENST00000547338 FAM50BQ9Y247 325 aa18.36■□□□□ 0.53
RBFOX1-207ENST00000547338 STYXL1Q9Y6J8 313 aa18.36■□□□□ 0.53
RBFOX1-207ENST00000547338 ANK1P16157 1881 aa18.36■□□□□ 0.53
RBFOX1-207ENST00000547338 TADA2AO75478 443 aa18.35■□□□□ 0.53
RBFOX1-207ENST00000547338 LDHAP00338 332 aaKnown RBP18.35■□□□□ 0.53
RBFOX1-207ENST00000547338 ADRB2P07550 413 aa18.35■□□□□ 0.53
RBFOX1-207ENST00000547338 RPL17P18621 184 aaKnown RBP18.35■□□□□ 0.53
RBFOX1-207ENST00000547338 ADSSP30520 456 aa18.35■□□□□ 0.53
RBFOX1-207ENST00000547338 LIG4P49917 911 aa18.35■□□□□ 0.53
RBFOX1-207ENST00000547338 YARSP54577 528 aaKnown RBP18.35■□□□□ 0.53
RBFOX1-207ENST00000547338 TNNC1P63316 161 aa18.35■□□□□ 0.53
RBFOX1-207ENST00000547338 CASP8Q14790 479 aa18.35■□□□□ 0.53
RBFOX1-207ENST00000547338 TERF2Q15554 542 aa18.35■□□□□ 0.53
RBFOX1-207ENST00000547338 ENOX2Q16206 610 aaKnown RBP18.35■□□□□ 0.53
RBFOX1-207ENST00000547338 PPP2R5EQ16537 467 aa18.35■□□□□ 0.53
RBFOX1-207ENST00000547338 USP41Q3LFD5 358 aa18.35■□□□□ 0.53
RBFOX1-207ENST00000547338 PRSS55Q6UWB4 352 aaPredicted RBP18.35■□□□□ 0.53
RBFOX1-207ENST00000547338 GPR65Q8IYL9 337 aa18.35■□□□□ 0.53
RBFOX1-207ENST00000547338 RDH13Q8NBN7 331 aa18.35■□□□□ 0.53
RBFOX1-207ENST00000547338 RFFLQ8WZ73 363 aa18.35■□□□□ 0.53
RBFOX1-207ENST00000547338 PKNOX2Q96KN3 472 aa18.35■□□□□ 0.53
RBFOX1-207ENST00000547338 AGPAT1Q99943 283 aa18.35■□□□□ 0.53
RBFOX1-207ENST00000547338 UBE2TQ9NPD8 197 aaPredicted RBP18.35■□□□□ 0.53
RBFOX1-207ENST00000547338 TUBGCP4Q9UGJ1 667 aa18.35■□□□□ 0.53
RBFOX1-207ENST00000547338 SF3B1O75533 1304 aaKnown RBP eCLIP18.35■□□□□ 0.53
RBFOX1-207ENST00000547338 CLTAP09496 248 aa18.34■□□□□ 0.53
RBFOX1-207ENST00000547338 GALCP54803 685 aa18.34■□□□□ 0.53
RBFOX1-207ENST00000547338 PPP3CAQ08209 521 aa18.34■□□□□ 0.53
RBFOX1-207ENST00000547338 NNTQ13423 1086 aa18.34■□□□□ 0.53
RBFOX1-207ENST00000547338 ZBTB6Q15916 424 aa18.34■□□□□ 0.53
RBFOX1-207ENST00000547338 C1orf220Q5T0J3 134 aa18.34■□□□□ 0.53
RBFOX1-207ENST00000547338 IFT20Q8IY31 132 aa18.34■□□□□ 0.53
RBFOX1-207ENST00000547338 GPD1LQ8N335 351 aa18.34■□□□□ 0.53
RBFOX1-207ENST00000547338 LNX1Q8TBB1 728 aaPredicted RBP18.34■□□□□ 0.53
RBFOX1-207ENST00000547338 RIN2Q8WYP3 895 aaPredicted RBP18.34■□□□□ 0.53
RBFOX1-207ENST00000547338 EMILIN2Q9BXX0 1053 aa18.34■□□□□ 0.53
RBFOX1-207ENST00000547338 PACSIN1Q9BY11 444 aa18.34■□□□□ 0.53
RBFOX1-207ENST00000547338 EPHX3Q9H6B9 360 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms