RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 ZSWIM1Q9BR11 485 aa16.78■□□□□ 0.28
TRAFD1-203ENST00000547063 FNIP2Q9P278 1114 aa16.78■□□□□ 0.28
TRAFD1-203ENST00000547063 INTUQ9ULD6 942 aa16.78■□□□□ 0.28
TRAFD1-203ENST00000547063 ZKSCAN5Q9Y2L8 839 aa16.78■□□□□ 0.28
TRAFD1-203ENST00000547063 MYBPHLA2RUH7 354 aa16.77■□□□□ 0.28
TRAFD1-203ENST00000547063 LPXNO60711 386 aa16.77■□□□□ 0.28
TRAFD1-203ENST00000547063 ATP2C2O75185 946 aa16.77■□□□□ 0.28
TRAFD1-203ENST00000547063 MICAL2O94851 1124 aa16.77■□□□□ 0.28
TRAFD1-203ENST00000547063 CALCAP01258 141 aa16.77■□□□□ 0.28
TRAFD1-203ENST00000547063 FAM200BP0CF97 657 aa16.77■□□□□ 0.28
TRAFD1-203ENST00000547063 CTSAP10619 480 aa16.77■□□□□ 0.28
TRAFD1-203ENST00000547063 CPB1P15086 417 aa16.77■□□□□ 0.28
TRAFD1-203ENST00000547063 MYOGP15173 224 aa16.77■□□□□ 0.28
TRAFD1-203ENST00000547063 ADORA2BP29275 332 aa16.77■□□□□ 0.28
TRAFD1-203ENST00000547063 NOMO3P69849 1222 aa16.77■□□□□ 0.28
TRAFD1-203ENST00000547063 CYP27A1Q02318 531 aa16.77■□□□□ 0.28
TRAFD1-203ENST00000547063 CENPCQ03188 943 aa16.77■□□□□ 0.28
TRAFD1-203ENST00000547063 BST2Q10589 180 aaKnown RBP16.77■□□□□ 0.28
TRAFD1-203ENST00000547063 GPR17Q13304 367 aa16.77■□□□□ 0.28
TRAFD1-203ENST00000547063 ACAD10Q6JQN1 1059 aa16.77■□□□□ 0.28
TRAFD1-203ENST00000547063 PDE12Q6L8Q7 609 aaKnown RBP16.77■□□□□ 0.28
TRAFD1-203ENST00000547063 FUKQ8N0W3 1084 aa16.77■□□□□ 0.28
TRAFD1-203ENST00000547063 FBXO22Q8NEZ5 403 aa16.77■□□□□ 0.28
TRAFD1-203ENST00000547063 SMARCD1Q96GM5 515 aa16.77■□□□□ 0.28
TRAFD1-203ENST00000547063 PCED1BQ96HM7 432 aa16.77■□□□□ 0.28
TRAFD1-203ENST00000547063 VCPIP1Q96JH7 1222 aa16.77■□□□□ 0.28
TRAFD1-203ENST00000547063 B3GALT6Q96L58 329 aa16.77■□□□□ 0.28
TRAFD1-203ENST00000547063 PCDHB18PQ96TA0 734 aa16.77■□□□□ 0.28
TRAFD1-203ENST00000547063 PKMYT1Q99640 499 aa16.77■□□□□ 0.28
TRAFD1-203ENST00000547063 C17orf80Q9BSJ5 609 aa16.77■□□□□ 0.28
TRAFD1-203ENST00000547063 PBX4Q9BYU1 374 aa16.77■□□□□ 0.28
TRAFD1-203ENST00000547063 ZBP1Q9H171 429 aa16.77■□□□□ 0.28
TRAFD1-203ENST00000547063 ISCUQ9H1K1 167 aa16.77■□□□□ 0.28
TRAFD1-203ENST00000547063 SLC28A3Q9HAS3 691 aa16.77■□□□□ 0.28
TRAFD1-203ENST00000547063 ABCB6Q9NP58 842 aa16.77■□□□□ 0.28
TRAFD1-203ENST00000547063 ADGRG1Q9Y653 693 aa16.77■□□□□ 0.28
TRAFD1-203ENST00000547063 PDE4DIPQ5VU43 2346 aa16.77■□□□□ 0.28
TRAFD1-203ENST00000547063 A0A1W2PPC1 479 aa16.76■□□□□ 0.27
TRAFD1-203ENST00000547063 H2AFZP0C0S5 128 aa16.76■□□□□ 0.27
TRAFD1-203ENST00000547063 UNGP13051 313 aaPredicted RBP16.76■□□□□ 0.27
TRAFD1-203ENST00000547063 CCDC130P13994 396 aa16.76■□□□□ 0.27
TRAFD1-203ENST00000547063 MAGEA1P43355 309 aa16.76■□□□□ 0.27
TRAFD1-203ENST00000547063 SMAD3P84022 425 aaKnown RBP16.76■□□□□ 0.27
TRAFD1-203ENST00000547063 TAP1Q03518 808 aa16.76■□□□□ 0.27
TRAFD1-203ENST00000547063 CFAP221Q4G0U5 840 aa16.76■□□□□ 0.27
TRAFD1-203ENST00000547063 SLC39A12Q504Y0 691 aa16.76■□□□□ 0.27
TRAFD1-203ENST00000547063 NAA35Q5VZE5 725 aa16.76■□□□□ 0.27
TRAFD1-203ENST00000547063 PPP2R2DQ66LE6 453 aa16.76■□□□□ 0.27
TRAFD1-203ENST00000547063 TPGS2Q68CL5 300 aa16.76■□□□□ 0.27
TRAFD1-203ENST00000547063 PRSS55Q6UWB4 352 aaPredicted RBP16.76■□□□□ 0.27
TRAFD1-203ENST00000547063 TOGARAM2Q6ZUX3 1019 aa16.76■□□□□ 0.27
TRAFD1-203ENST00000547063 H2AFVQ71UI9 128 aa16.76■□□□□ 0.27
TRAFD1-203ENST00000547063 TMC7Q7Z402 723 aa16.76■□□□□ 0.27
TRAFD1-203ENST00000547063 KIAA1328Q86T90 577 aa16.76■□□□□ 0.27
TRAFD1-203ENST00000547063 FAM35AQ86V20 835 aa16.76■□□□□ 0.27
TRAFD1-203ENST00000547063 PASD1Q8IV76 773 aa16.76■□□□□ 0.27
TRAFD1-203ENST00000547063 OLIG1Q8TAK6 271 aa16.76■□□□□ 0.27
TRAFD1-203ENST00000547063 SPPL2BQ8TCT7 592 aa16.76■□□□□ 0.27
TRAFD1-203ENST00000547063 STK32AQ8WU08 396 aa16.76■□□□□ 0.27
TRAFD1-203ENST00000547063 MYLPFQ96A32 169 aa16.76■□□□□ 0.27
TRAFD1-203ENST00000547063 DUSP16Q9BY84 665 aa16.76■□□□□ 0.27
TRAFD1-203ENST00000547063 B3GNT5Q9BYG0 378 aa16.76■□□□□ 0.27
TRAFD1-203ENST00000547063 NGRNQ9NPE2 291 aaKnown RBP16.76■□□□□ 0.27
TRAFD1-203ENST00000547063 CYLDQ9NQC7 956 aa16.76■□□□□ 0.27
TRAFD1-203ENST00000547063 MAFFQ9ULX9 164 aa16.76■□□□□ 0.27
TRAFD1-203ENST00000547063 NENFQ9UMX5 172 aa16.76■□□□□ 0.27
TRAFD1-203ENST00000547063 YBX2Q9Y2T7 364 aaKnown RBP16.76■□□□□ 0.27
TRAFD1-203ENST00000547063 PCDHB5Q9Y5E4 795 aa16.76■□□□□ 0.27
TRAFD1-203ENST00000547063 PCDHA13Q9Y5I0 950 aa16.76■□□□□ 0.27
TRAFD1-203ENST00000547063 IRAK3Q9Y616 596 aa16.76■□□□□ 0.27
TRAFD1-203ENST00000547063 CDY1Q9Y6F8 540 aa16.76■□□□□ 0.27
TRAFD1-203ENST00000547063 ANKRD62A6NC57 917 aa16.75■□□□□ 0.27
TRAFD1-203ENST00000547063 GOLGA6L9A6NEM1 432 aa16.75■□□□□ 0.27
TRAFD1-203ENST00000547063 C2CD2LO14523 706 aa16.75■□□□□ 0.27
TRAFD1-203ENST00000547063 FTLP02792 175 aaPredicted RBP16.75■□□□□ 0.27
TRAFD1-203ENST00000547063 CALB1P05937 261 aa16.75■□□□□ 0.27
TRAFD1-203ENST00000547063 MYBL1P10243 752 aa16.75■□□□□ 0.27
TRAFD1-203ENST00000547063 NPR3P17342 541 aa16.75■□□□□ 0.27
TRAFD1-203ENST00000547063 GPD2P43304 727 aa16.75■□□□□ 0.27
TRAFD1-203ENST00000547063 MAGEA11P43364 429 aa16.75■□□□□ 0.27
TRAFD1-203ENST00000547063 NDUFV1P49821 464 aa16.75■□□□□ 0.27
TRAFD1-203ENST00000547063 VAV2P52735 878 aa16.75■□□□□ 0.27
TRAFD1-203ENST00000547063 SMC1AQ14683 1233 aaKnown RBP16.75■□□□□ 0.27
TRAFD1-203ENST00000547063 PKDCCQ504Y2 493 aa16.75■□□□□ 0.27
TRAFD1-203ENST00000547063 DENND1BQ6P3S1 775 aa16.75■□□□□ 0.27
TRAFD1-203ENST00000547063 VSTM1Q6UX27 236 aa16.75■□□□□ 0.27
TRAFD1-203ENST00000547063 LRRTM3Q86VH5 581 aa16.75■□□□□ 0.27
TRAFD1-203ENST00000547063 ERICH1Q86X53 443 aa16.75■□□□□ 0.27
TRAFD1-203ENST00000547063 PHF13Q86YI8 300 aaPredicted RBP16.75■□□□□ 0.27
TRAFD1-203ENST00000547063 C1orf131Q8NDD1 294 aaKnown RBP16.75■□□□□ 0.27
TRAFD1-203ENST00000547063 SPPL3Q8TCT6 385 aa16.75■□□□□ 0.27
TRAFD1-203ENST00000547063 IPO4Q8TEX9 1081 aaKnown RBP16.75■□□□□ 0.27
TRAFD1-203ENST00000547063 UBXN6Q9BZV1 441 aa16.75■□□□□ 0.27
TRAFD1-203ENST00000547063 TSGA10Q9BZW7 698 aa16.75■□□□□ 0.27
TRAFD1-203ENST00000547063 NKX2-4Q9H2Z4 354 aa16.75■□□□□ 0.27
TRAFD1-203ENST00000547063 RXFP1Q9HBX9 757 aa16.75■□□□□ 0.27
TRAFD1-203ENST00000547063 ENTPD7Q9NQZ7 604 aa16.75■□□□□ 0.27
TRAFD1-203ENST00000547063 TLR9Q9NR96 1032 aa16.75■□□□□ 0.27
TRAFD1-203ENST00000547063 HSFX1Q9UBD0 423 aa16.75■□□□□ 0.27
TRAFD1-203ENST00000547063 STRIP2Q9ULQ0 834 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms