RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 MYO1EQ12965 1108 aa12.63□□□□□ -0.39
CCDC38-202ENST00000546386 PDCLQ13371 301 aa12.63□□□□□ -0.39
CCDC38-202ENST00000546386 SURF1Q15526 300 aa12.63□□□□□ -0.39
CCDC38-202ENST00000546386 WSCD1Q658N2 575 aa12.63□□□□□ -0.39
CCDC38-202ENST00000546386 PLEKHA7Q6IQ23 1121 aa12.63□□□□□ -0.39
CCDC38-202ENST00000546386 ZNF572Q7Z3I7 529 aaPredicted RBP12.63□□□□□ -0.39
CCDC38-202ENST00000546386 MAATS1Q7Z4T9 603 aa12.63□□□□□ -0.39
CCDC38-202ENST00000546386 SLC2A14Q8TDB8 520 aa12.63□□□□□ -0.39
CCDC38-202ENST00000546386 ZIM3Q96PE6 472 aa12.63□□□□□ -0.39
CCDC38-202ENST00000546386 GDF3Q9NR23 364 aa12.63□□□□□ -0.39
CCDC38-202ENST00000546386 HCSTQ9UBK5 93 aa12.63□□□□□ -0.39
CCDC38-202ENST00000546386 PADI3Q9ULW8 664 aa12.63□□□□□ -0.39
CCDC38-202ENST00000546386 CNTN6Q9UQ52 1028 aa12.63□□□□□ -0.39
CCDC38-202ENST00000546386 PPME1Q9Y570 386 aa12.63□□□□□ -0.39
CCDC38-202ENST00000546386 CEP83Q9Y592 693 aa12.63□□□□□ -0.39
CCDC38-202ENST00000546386 TRPM7Q96QT4 1865 aa12.63□□□□□ -0.39
CCDC38-202ENST00000546386 TMEM191CA6NGB0 347 aa12.63□□□□□ -0.39
CCDC38-202ENST00000546386 KPNA7A9QM74 516 aa12.63□□□□□ -0.39
CCDC38-202ENST00000546386 KRT1P04264 644 aa12.63□□□□□ -0.39
CCDC38-202ENST00000546386 ITGB1P05556 798 aa12.63□□□□□ -0.39
CCDC38-202ENST00000546386 PFKMP08237 780 aa12.63□□□□□ -0.39
CCDC38-202ENST00000546386 PBX3P40426 434 aa12.63□□□□□ -0.39
CCDC38-202ENST00000546386 RPL21P46778 160 aaKnown RBP12.63□□□□□ -0.39
CCDC38-202ENST00000546386 AP3M2P53677 418 aa12.63□□□□□ -0.39
CCDC38-202ENST00000546386 ATN1P54259 1190 aaPredicted RBP12.63□□□□□ -0.39
CCDC38-202ENST00000546386 PPP1R7Q15435 360 aa12.63□□□□□ -0.39
CCDC38-202ENST00000546386 FBXO47Q5MNV8 452 aa12.63□□□□□ -0.39
CCDC38-202ENST00000546386 ADAM32Q8TC27 787 aa12.63□□□□□ -0.39
CCDC38-202ENST00000546386 MTG1Q9BT17 334 aaPredicted RBP12.63□□□□□ -0.39
CCDC38-202ENST00000546386 NT5C1AQ9BXI3 368 aa12.63□□□□□ -0.39
CCDC38-202ENST00000546386 CALN1Q9BXU9 219 aa12.63□□□□□ -0.39
CCDC38-202ENST00000546386 WNT8AQ9H1J5 351 aa12.63□□□□□ -0.39
CCDC38-202ENST00000546386 CREBZFQ9NS37 354 aa12.63□□□□□ -0.39
CCDC38-202ENST00000546386 BARX2Q9UMQ3 279 aaPredicted RBP12.63□□□□□ -0.39
CCDC38-202ENST00000546386 UTP11Q9Y3A2 253 aaKnown RBP12.63□□□□□ -0.39
CCDC38-202ENST00000546386 RNF40O75150 1001 aa12.62□□□□□ -0.39
CCDC38-202ENST00000546386 ADAMTS4O75173 837 aa12.62□□□□□ -0.39
CCDC38-202ENST00000546386 IFNB1P01574 187 aa12.62□□□□□ -0.39
CCDC38-202ENST00000546386 ATP1A2P50993 1020 aa12.62□□□□□ -0.39
CCDC38-202ENST00000546386 CRYBB1P53674 252 aaPredicted RBP12.62□□□□□ -0.39
CCDC38-202ENST00000546386 MRPS6P82932 125 aaKnown RBP12.62□□□□□ -0.39
CCDC38-202ENST00000546386 SIX1Q15475 284 aaPredicted RBP12.62□□□□□ -0.39
CCDC38-202ENST00000546386 FAM183BPQ6ZVS7 135 aa12.62□□□□□ -0.39
CCDC38-202ENST00000546386 XYLT1Q86Y38 959 aa12.62□□□□□ -0.39
CCDC38-202ENST00000546386 PHF13Q86YI8 300 aaPredicted RBP12.62□□□□□ -0.39
CCDC38-202ENST00000546386 GSTCDQ8NEC7 633 aa12.62□□□□□ -0.39
CCDC38-202ENST00000546386 KCNK16Q96T55 309 aa12.62□□□□□ -0.39
CCDC38-202ENST00000546386 SPC25Q9HBM1 224 aa12.62□□□□□ -0.39
CCDC38-202ENST00000546386 NGRNQ9NPE2 291 aaKnown RBP12.62□□□□□ -0.39
CCDC38-202ENST00000546386 FAM53CQ9NYF3 392 aa12.62□□□□□ -0.39
CCDC38-202ENST00000546386 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.62□□□□□ -0.39
CCDC38-202ENST00000546386 DAAM1Q9Y4D1 1078 aa12.62□□□□□ -0.39
CCDC38-202ENST00000546386 CCDC66A2RUB6 948 aa12.62□□□□□ -0.39
CCDC38-202ENST00000546386 GOLGA8MH3BSY2 632 aa12.62□□□□□ -0.39
CCDC38-202ENST00000546386 M0QZ92 97 aa12.62□□□□□ -0.39
CCDC38-202ENST00000546386 TKTP29401 623 aaKnown RBP12.62□□□□□ -0.39
CCDC38-202ENST00000546386 GNL1P36915 607 aaPredicted RBP12.62□□□□□ -0.39
CCDC38-202ENST00000546386 SLCO1A2P46721 670 aa12.62□□□□□ -0.39
CCDC38-202ENST00000546386 NUBP1P53384 320 aa12.62□□□□□ -0.39
CCDC38-202ENST00000546386 LILRA4P59901 499 aa12.62□□□□□ -0.39
CCDC38-202ENST00000546386 KIAA0319Q5VV43 1072 aa12.62□□□□□ -0.39
CCDC38-202ENST00000546386 ZNF677Q86XU0 584 aa12.62□□□□□ -0.39
CCDC38-202ENST00000546386 KBTBD7Q8WVZ9 684 aa12.62□□□□□ -0.39
CCDC38-202ENST00000546386 MRRFQ96E11 262 aaKnown RBP12.62□□□□□ -0.39
CCDC38-202ENST00000546386 RPS6KC1Q96S38 1066 aa12.62□□□□□ -0.39
CCDC38-202ENST00000546386 GOLGA6L10A0A0M3HER8 536 aa12.61□□□□□ -0.39
CCDC38-202ENST00000546386 LRCH4O75427 683 aa12.61□□□□□ -0.39
CCDC38-202ENST00000546386 BRCC3P46736 316 aa12.61□□□□□ -0.39
CCDC38-202ENST00000546386 VEGFBP49765 207 aa12.61□□□□□ -0.39
CCDC38-202ENST00000546386 PITX1P78337 314 aaPredicted RBP12.61□□□□□ -0.39
CCDC38-202ENST00000546386 POU5F1Q01860 360 aaKnown RBP12.61□□□□□ -0.39
CCDC38-202ENST00000546386 ITGA7Q13683 1181 aa12.61□□□□□ -0.39
CCDC38-202ENST00000546386 HSP90B2PQ58FF3 399 aa12.61□□□□□ -0.39
CCDC38-202ENST00000546386 NPNTQ6UXI9 565 aa12.61□□□□□ -0.39
CCDC38-202ENST00000546386 GSTA5Q7RTV2 222 aa12.61□□□□□ -0.39
CCDC38-202ENST00000546386 BEST2Q8NFU1 509 aa12.61□□□□□ -0.39
CCDC38-202ENST00000546386 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.61□□□□□ -0.39
CCDC38-202ENST00000546386 KHSRPQ92945 711 aaKnown RBP eCLIP12.61□□□□□ -0.39
CCDC38-202ENST00000546386 B3GALT6Q96L58 329 aa12.61□□□□□ -0.39
CCDC38-202ENST00000546386 ADAM2Q99965 735 aa12.61□□□□□ -0.39
CCDC38-202ENST00000546386 TMEM121Q9BTD3 319 aa12.61□□□□□ -0.39
CCDC38-202ENST00000546386 FAM204AQ9H8W3 233 aa12.61□□□□□ -0.39
CCDC38-202ENST00000546386 MRPL47Q9HD33 250 aaKnown RBP12.61□□□□□ -0.39
CCDC38-202ENST00000546386 FAM105AQ9NUU6 356 aa12.61□□□□□ -0.39
CCDC38-202ENST00000546386 RNF14Q9UBS8 474 aa12.61□□□□□ -0.39
CCDC38-202ENST00000546386 ASIC3Q9UHC3 531 aa12.61□□□□□ -0.39
CCDC38-202ENST00000546386 ITGA11Q9UKX5 1188 aa12.61□□□□□ -0.39
CCDC38-202ENST00000546386 C2CD2Q9Y426 696 aa12.61□□□□□ -0.39
CCDC38-202ENST00000546386 TLDC2A0PJX2 215 aa12.61□□□□□ -0.39
CCDC38-202ENST00000546386 ARL5CA6NH57 179 aa12.61□□□□□ -0.39
CCDC38-202ENST00000546386 LMAN1P49257 510 aa12.61□□□□□ -0.39
CCDC38-202ENST00000546386 GJA9P57773 515 aa12.61□□□□□ -0.39
CCDC38-202ENST00000546386 POU5F1BQ06416 359 aa12.61□□□□□ -0.39
CCDC38-202ENST00000546386 ADCY1Q08828 1119 aa12.61□□□□□ -0.39
CCDC38-202ENST00000546386 ZBTB6Q15916 424 aa12.61□□□□□ -0.39
CCDC38-202ENST00000546386 MAP9Q49MG5 647 aa12.61□□□□□ -0.39
CCDC38-202ENST00000546386 ZC3H12AQ5D1E8 599 aaKnown RBP12.61□□□□□ -0.39
CCDC38-202ENST00000546386 PPP6R3Q5H9R7 873 aaPredicted RBP12.61□□□□□ -0.39
CCDC38-202ENST00000546386 ALKAL1Q6UXT8 129 aa12.61□□□□□ -0.39
CCDC38-202ENST00000546386 OSTM1Q86WC4 334 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms