RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 ATP2C2O75185 946 aa22.63■■□□□ 1.21
SCARB1-210ENST00000545493 LMNAP02545 664 aaKnown RBP22.63■■□□□ 1.21
SCARB1-210ENST00000545493 CSH1P0DML2 217 aa22.63■■□□□ 1.21
SCARB1-210ENST00000545493 CSH2P0DML3 217 aa22.63■■□□□ 1.21
SCARB1-210ENST00000545493 WARSP23381 471 aaKnown RBP22.63■■□□□ 1.21
SCARB1-210ENST00000545493 CCNE1P24864 410 aa22.63■■□□□ 1.21
SCARB1-210ENST00000545493 LMO2P25791 158 aa22.63■■□□□ 1.21
SCARB1-210ENST00000545493 CSTF1Q05048 431 aaKnown RBP22.63■■□□□ 1.21
SCARB1-210ENST00000545493 KNOP1Q1ED39 458 aaKnown RBP22.63■■□□□ 1.21
SCARB1-210ENST00000545493 ARHGAP29Q52LW3 1261 aa22.63■■□□□ 1.21
SCARB1-210ENST00000545493 FAM171BQ6P995 826 aa22.63■■□□□ 1.21
SCARB1-210ENST00000545493 TXNDC11Q6PKC3 985 aa22.63■■□□□ 1.21
SCARB1-210ENST00000545493 TSSK4Q6SA08 328 aa22.63■■□□□ 1.21
SCARB1-210ENST00000545493 DPH6Q7L8W6 267 aa22.63■■□□□ 1.21
SCARB1-210ENST00000545493 CMTM8Q8IZV2 173 aa22.63■■□□□ 1.21
SCARB1-210ENST00000545493 RIN3Q8TB24 985 aa22.63■■□□□ 1.21
SCARB1-210ENST00000545493 PLEKHO2Q8TD55 490 aa22.63■■□□□ 1.21
SCARB1-210ENST00000545493 BPIFB1Q8TDL5 484 aa22.63■■□□□ 1.21
SCARB1-210ENST00000545493 CCDC127Q96BQ5 260 aa22.63■■□□□ 1.21
SCARB1-210ENST00000545493 PAGE5Q96GU1 130 aa22.63■■□□□ 1.21
SCARB1-210ENST00000545493 FUBP3Q96I24 572 aaKnown RBP eCLIP22.63■■□□□ 1.21
SCARB1-210ENST00000545493 SEMA4AQ9H3S1 761 aa22.63■■□□□ 1.21
SCARB1-210ENST00000545493 CRTAC1Q9NQ79 661 aa22.63■■□□□ 1.21
SCARB1-210ENST00000545493 GTSE1Q9NYZ3 720 aa22.63■■□□□ 1.21
SCARB1-210ENST00000545493 CCL26Q9Y258 94 aa22.63■■□□□ 1.21
SCARB1-210ENST00000545493 R3HCC1Q9Y3T6 440 aaKnown RBP22.63■■□□□ 1.21
SCARB1-210ENST00000545493 A0A1B0GVL5 298 aa22.62■■□□□ 1.21
SCARB1-210ENST00000545493 TDGF1P13385 188 aa22.62■■□□□ 1.21
SCARB1-210ENST00000545493 TNNI1P19237 187 aa22.62■■□□□ 1.21
SCARB1-210ENST00000545493 MLLT6P55198 1093 aaPredicted RBP22.62■■□□□ 1.21
SCARB1-210ENST00000545493 TNK2Q07912 1038 aa22.62■■□□□ 1.21
SCARB1-210ENST00000545493 STK4Q13043 487 aa22.62■■□□□ 1.21
SCARB1-210ENST00000545493 SPATA2LQ8IUW3 424 aaPredicted RBP22.62■■□□□ 1.21
SCARB1-210ENST00000545493 TTC8Q8TAM2 541 aa22.62■■□□□ 1.21
SCARB1-210ENST00000545493 NELL1Q92832 810 aa22.62■■□□□ 1.21
SCARB1-210ENST00000545493 TRMT2BQ96GJ1 504 aaKnown RBP22.62■■□□□ 1.21
SCARB1-210ENST00000545493 FNBP1Q96RU3 617 aa22.62■■□□□ 1.21
SCARB1-210ENST00000545493 MRPL45Q9BRJ2 306 aaKnown RBP22.62■■□□□ 1.21
SCARB1-210ENST00000545493 ZMYM5Q9UJ78 669 aa22.62■■□□□ 1.21
SCARB1-210ENST00000545493 CDH9Q9ULB4 789 aa22.62■■□□□ 1.21
SCARB1-210ENST00000545493 ANAPC1Q9H1A4 1944 aa22.62■■□□□ 1.21
SCARB1-210ENST00000545493 OTOGLQ3ZCN5 2332 aa22.62■■□□□ 1.21
SCARB1-210ENST00000545493 HELZP42694 1942 aaKnown RBP22.61■■□□□ 1.21
SCARB1-210ENST00000545493 SPECC1L-ADORA2AF8WAN1 911 aa22.61■■□□□ 1.21
SCARB1-210ENST00000545493 CST3P01034 146 aaPredicted RBP22.61■■□□□ 1.21
SCARB1-210ENST00000545493 CHRNB1P11230 501 aa22.61■■□□□ 1.21
SCARB1-210ENST00000545493 PTPRZ1P23471 2315 aaPredicted RBP22.61■■□□□ 1.21
SCARB1-210ENST00000545493 DDX6P26196 483 aaKnown RBP eCLIP22.61■■□□□ 1.21
SCARB1-210ENST00000545493 CTHP32929 405 aa22.61■■□□□ 1.21
SCARB1-210ENST00000545493 CASP4P49662 377 aa22.61■■□□□ 1.21
SCARB1-210ENST00000545493 RPL10AP62906 217 aaKnown RBP22.61■■□□□ 1.21
SCARB1-210ENST00000545493 GAS6Q14393 721 aa22.61■■□□□ 1.21
SCARB1-210ENST00000545493 TXNDC8Q6A555 127 aa22.61■■□□□ 1.21
SCARB1-210ENST00000545493 MAB21L3Q8N8X9 362 aa22.61■■□□□ 1.21
SCARB1-210ENST00000545493 ZNF516Q92618 1163 aa22.61■■□□□ 1.21
SCARB1-210ENST00000545493 USP13Q92995 863 aaPredicted RBP22.61■■□□□ 1.21
SCARB1-210ENST00000545493 C8orf33Q9H7E9 229 aaPredicted RBP22.61■■□□□ 1.21
SCARB1-210ENST00000545493 EXOC1Q9NV70 894 aa22.61■■□□□ 1.21
SCARB1-210ENST00000545493 CGNQ9P2M7 1197 aaKnown RBP22.61■■□□□ 1.21
SCARB1-210ENST00000545493 ZNF638Q14966 1978 aaKnown RBP22.61■■□□□ 1.21
SCARB1-210ENST00000545493 CMA1P23946 247 aa22.6■■□□□ 1.21
SCARB1-210ENST00000545493 MAGEA11P43364 429 aa22.6■■□□□ 1.21
SCARB1-210ENST00000545493 KPNA1P52294 538 aaPredicted RBP22.6■■□□□ 1.21
SCARB1-210ENST00000545493 KMT5BQ4FZB7 885 aa22.6■■□□□ 1.21
SCARB1-210ENST00000545493 CELF5Q8N6W0 485 aaKnown RBP22.6■■□□□ 1.21
SCARB1-210ENST00000545493 ZBTB44Q8NCP5 570 aa22.6■■□□□ 1.21
SCARB1-210ENST00000545493 SPATA32Q96LK8 384 aa22.6■■□□□ 1.21
SCARB1-210ENST00000545493 MYRFLQ96LU7 910 aa22.6■■□□□ 1.21
SCARB1-210ENST00000545493 IER2Q9BTL4 223 aa22.6■■□□□ 1.21
SCARB1-210ENST00000545493 LMAN1LQ9HAT1 526 aa22.6■■□□□ 1.21
SCARB1-210ENST00000545493 EXOC3O60645 756 aa22.59■■□□□ 1.21
SCARB1-210ENST00000545493 KINO60870 393 aaKnown RBP22.59■■□□□ 1.21
SCARB1-210ENST00000545493 STAU1O95793 577 aaKnown RBP22.59■■□□□ 1.21
SCARB1-210ENST00000545493 AVPR1AP37288 418 aa22.59■■□□□ 1.21
SCARB1-210ENST00000545493 KRT85P78386 507 aa22.59■■□□□ 1.21
SCARB1-210ENST00000545493 PLCB2Q00722 1185 aa22.59■■□□□ 1.21
SCARB1-210ENST00000545493 C1orf228Q6PIY5 440 aa22.59■■□□□ 1.21
SCARB1-210ENST00000545493 C4orf50Q6ZRC1 276 aa22.59■■□□□ 1.21
SCARB1-210ENST00000545493 SCN4BQ8IWT1 228 aa22.59■■□□□ 1.21
SCARB1-210ENST00000545493 SUMF1Q8NBK3 374 aa22.59■■□□□ 1.21
SCARB1-210ENST00000545493 MRPS31Q92665 395 aaKnown RBP22.59■■□□□ 1.21
SCARB1-210ENST00000545493 MMS19Q96T76 1030 aa22.59■■□□□ 1.21
SCARB1-210ENST00000545493 XYLT2Q9H1B5 865 aa22.59■■□□□ 1.21
SCARB1-210ENST00000545493 KCTD10Q9H3F6 313 aa22.59■■□□□ 1.21
SCARB1-210ENST00000545493 DPEP3Q9H4B8 488 aa22.59■■□□□ 1.21
SCARB1-210ENST00000545493 KIF9Q9HAQ2 790 aa22.59■■□□□ 1.21
SCARB1-210ENST00000545493 HPS4Q9NQG7 708 aa22.59■■□□□ 1.21
SCARB1-210ENST00000545493 RBM12Q9NTZ6 932 aaKnown RBP22.59■■□□□ 1.21
SCARB1-210ENST00000545493 UXTQ9UBK9 157 aaPredicted RBP22.59■■□□□ 1.21
SCARB1-210ENST00000545493 PCDHGA2Q9Y5H1 932 aa22.59■■□□□ 1.21
SCARB1-210ENST00000545493 GPR179Q6PRD1 2367 aa22.58■■□□□ 1.21
SCARB1-210ENST00000545493 FAM237AA0A1B0GTK4 181 aa22.58■■□□□ 1.21
SCARB1-210ENST00000545493 LRRIQ3A6PVS8 624 aaPredicted RBP22.58■■□□□ 1.21
SCARB1-210ENST00000545493 TACC1O75410 805 aa22.58■■□□□ 1.21
SCARB1-210ENST00000545493 PRR29P0C7W0 189 aa22.58■■□□□ 1.21
SCARB1-210ENST00000545493 TDRD10Q5VZ19 366 aaKnown RBP22.58■■□□□ 1.21
SCARB1-210ENST00000545493 Q6ZS52 159 aa22.58■■□□□ 1.21
SCARB1-210ENST00000545493 MON1AQ86VX9 555 aa22.58■■□□□ 1.21
SCARB1-210ENST00000545493 RALGPS2Q86X27 583 aaPredicted RBP22.58■■□□□ 1.21
SCARB1-210ENST00000545493 GOLGA5Q8TBA6 731 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms