RNA–Protein interactions for RNA: ENST00000545266.1

COPA-206, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-206ENST00000545266 TBCCD1Q9NVR7 557 aa6.79□□□□□ -1.32
COPA-206ENST00000545266 FNIP2Q9P278 1114 aa6.79□□□□□ -1.32
COPA-206ENST00000545266 MYO1AQ9UBC5 1043 aa6.79□□□□□ -1.32
COPA-206ENST00000545266 MAST3O60307 1309 aa6.78□□□□□ -1.32
COPA-206ENST00000545266 LOC102723971A0A1B0GUV8 181 aa6.78□□□□□ -1.32
COPA-206ENST00000545266 POM121BA6NF01 834 aa6.78□□□□□ -1.32
COPA-206ENST00000545266 NPIPB8E9PQR5 432 aa6.78□□□□□ -1.32
COPA-206ENST00000545266 F5H697 171 aa6.78□□□□□ -1.32
COPA-206ENST00000545266 FGF18O76093 207 aa6.78□□□□□ -1.32
COPA-206ENST00000545266 IFIT2P09913 472 aaKnown RBP6.78□□□□□ -1.32
COPA-206ENST00000545266 KCNA3P22001 575 aa6.78□□□□□ -1.32
COPA-206ENST00000545266 TNFSF4P23510 183 aa6.78□□□□□ -1.32
COPA-206ENST00000545266 MYO1EQ12965 1108 aa6.78□□□□□ -1.32
COPA-206ENST00000545266 MORC3Q14149 939 aa6.78□□□□□ -1.32
COPA-206ENST00000545266 ZIK1Q3SY52 487 aaPredicted RBP6.78□□□□□ -1.32
COPA-206ENST00000545266 DGKKQ5KSL6 1271 aa6.78□□□□□ -1.32
COPA-206ENST00000545266 RBM20Q5T481 1227 aaKnown RBP6.78□□□□□ -1.32
COPA-206ENST00000545266 IZUMO3Q5VZ72 239 aa6.78□□□□□ -1.32
COPA-206ENST00000545266 FCRL6Q6DN72 434 aa6.78□□□□□ -1.32
COPA-206ENST00000545266 ZNF280BQ86YH2 543 aa6.78□□□□□ -1.32
COPA-206ENST00000545266 FAM186BQ8IYM0 893 aa6.78□□□□□ -1.32
COPA-206ENST00000545266 MPP5Q8N3R9 675 aa6.78□□□□□ -1.32
COPA-206ENST00000545266 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.78□□□□□ -1.32
COPA-206ENST00000545266 VGLL2Q8N8G2 317 aa6.78□□□□□ -1.32
COPA-206ENST00000545266 SSH3Q8TE77 659 aa6.78□□□□□ -1.32
COPA-206ENST00000545266 TNIP3Q96KP6 325 aa6.78□□□□□ -1.32
COPA-206ENST00000545266 GDF15Q99988 308 aa6.78□□□□□ -1.32
COPA-206ENST00000545266 SSX2IPQ9Y2D8 614 aa6.78□□□□□ -1.32
COPA-206ENST00000545266 ZNF202O95125 648 aa6.77□□□□□ -1.33
COPA-206ENST00000545266 A1BGP04217 495 aa6.77□□□□□ -1.33
COPA-206ENST00000545266 BTF3P20290 206 aaKnown RBP6.77□□□□□ -1.33
COPA-206ENST00000545266 CD6P30203 668 aa6.77□□□□□ -1.33
COPA-206ENST00000545266 HNRNPMP52272 730 aaKnown RBP eCLIP6.77□□□□□ -1.33
COPA-206ENST00000545266 PTPAQ15257 358 aa6.77□□□□□ -1.33
COPA-206ENST00000545266 INSCQ1MX18 579 aa6.77□□□□□ -1.33
COPA-206ENST00000545266 MGAT5BQ3V5L5 792 aa6.77□□□□□ -1.33
COPA-206ENST00000545266 VPS53Q5VIR6 699 aa6.77□□□□□ -1.33
COPA-206ENST00000545266 ICE2Q659A1 982 aa6.77□□□□□ -1.33
COPA-206ENST00000545266 LAYNQ6UX15 382 aa6.77□□□□□ -1.33
COPA-206ENST00000545266 CATSPERGQ6ZRH7 1159 aa6.77□□□□□ -1.33
COPA-206ENST00000545266 SRLQ86TD4 932 aa6.77□□□□□ -1.33
COPA-206ENST00000545266 GGNQ86UU5 652 aa6.77□□□□□ -1.33
COPA-206ENST00000545266 LPIN2Q92539 896 aa6.77□□□□□ -1.33
COPA-206ENST00000545266 PTCD3Q96EY7 689 aaKnown RBP6.77□□□□□ -1.33
COPA-206ENST00000545266 PPP1R9BQ96SB3 815 aa6.77□□□□□ -1.33
COPA-206ENST00000545266 ZNF341Q9BYN7 854 aa6.77□□□□□ -1.33
COPA-206ENST00000545266 KCTD5Q9NXV2 234 aa6.77□□□□□ -1.33
COPA-206ENST00000545266 DNMT3BQ9UBC3 853 aaKnown RBP6.77□□□□□ -1.33
COPA-206ENST00000545266 DKK4Q9UBT3 224 aa6.77□□□□□ -1.33
COPA-206ENST00000545266 NDRG4Q9ULP0 352 aaKnown RBP6.77□□□□□ -1.33
COPA-206ENST00000545266 REXO2Q9Y3B8 237 aaKnown RBP6.77□□□□□ -1.33
COPA-206ENST00000545266 WDR27A2RRH5 827 aa6.76□□□□□ -1.33
COPA-206ENST00000545266 GRID2IPA4D2P6 1211 aa6.76□□□□□ -1.33
COPA-206ENST00000545266 INMTO95050 263 aa6.76□□□□□ -1.33
COPA-206ENST00000545266 CSF1RP07333 972 aa6.76□□□□□ -1.33
COPA-206ENST00000545266 TACR2P21452 398 aa6.76□□□□□ -1.33
COPA-206ENST00000545266 FGFR2P21802 821 aa6.76□□□□□ -1.33
COPA-206ENST00000545266 IL1R2P27930 398 aa6.76□□□□□ -1.33
COPA-206ENST00000545266 SERPINB3P29508 390 aa6.76□□□□□ -1.33
COPA-206ENST00000545266 CARSP49589 748 aaKnown RBP6.76□□□□□ -1.33
COPA-206ENST00000545266 NXPH1P58417 271 aa6.76□□□□□ -1.33
COPA-206ENST00000545266 PUM1Q14671 1186 aaKnown RBP eCLIP6.76□□□□□ -1.33
COPA-206ENST00000545266 PREPLQ4J6C6 727 aaPredicted RBP6.76□□□□□ -1.33
COPA-206ENST00000545266 FAM209BQ5JX69 171 aa6.76□□□□□ -1.33
COPA-206ENST00000545266 HIBCHQ6NVY1 386 aaPredicted RBP6.76□□□□□ -1.33
COPA-206ENST00000545266 DBX2Q6ZNG2 339 aa6.76□□□□□ -1.33
COPA-206ENST00000545266 KRT28Q7Z3Y7 464 aa6.76□□□□□ -1.33
COPA-206ENST00000545266 DTX2Q86UW9 622 aa6.76□□□□□ -1.33
COPA-206ENST00000545266 MORC1Q86VD1 984 aa6.76□□□□□ -1.33
COPA-206ENST00000545266 YAF2Q8IY57 180 aa6.76□□□□□ -1.33
COPA-206ENST00000545266 AMER2Q8N7J2 671 aa6.76□□□□□ -1.33
COPA-206ENST00000545266 SLC30A5Q8TAD4 765 aa6.76□□□□□ -1.33
COPA-206ENST00000545266 ZNF384Q8TF68 577 aa6.76□□□□□ -1.33
COPA-206ENST00000545266 IPCEF1Q8WWN9 437 aaPredicted RBP6.76□□□□□ -1.33
COPA-206ENST00000545266 RAPGEF4Q8WZA2 1011 aa6.76□□□□□ -1.33
COPA-206ENST00000545266 FAM136AQ96C01 138 aa6.76□□□□□ -1.33
COPA-206ENST00000545266 TRIM5Q9C035 493 aa6.76□□□□□ -1.33
COPA-206ENST00000545266 CXorf36Q9H7Y0 433 aa6.76□□□□□ -1.33
COPA-206ENST00000545266 ZSCAN32Q9NX65 697 aa6.76□□□□□ -1.33
COPA-206ENST00000545266 CDY1Q9Y6F8 540 aa6.76□□□□□ -1.33
COPA-206ENST00000545266 THAP12O43422 761 aa6.75□□□□□ -1.33
COPA-206ENST00000545266 KCNQ3O43525 872 aa6.75□□□□□ -1.33
COPA-206ENST00000545266 NCK2O43639 380 aa6.75□□□□□ -1.33
COPA-206ENST00000545266 ITGAMP11215 1152 aa6.75□□□□□ -1.33
COPA-206ENST00000545266 PPP3CBP16298 524 aa6.75□□□□□ -1.33
COPA-206ENST00000545266 ACVR2AP27037 513 aa6.75□□□□□ -1.33
COPA-206ENST00000545266 MCM7P33993 719 aa6.75□□□□□ -1.33
COPA-206ENST00000545266 SATB1Q01826 763 aa6.75□□□□□ -1.33
COPA-206ENST00000545266 ITIH3Q06033 890 aa6.75□□□□□ -1.33
COPA-206ENST00000545266 BTKQ06187 659 aa6.75□□□□□ -1.33
COPA-206ENST00000545266 ARHGEF7Q14155 803 aa6.75□□□□□ -1.33
COPA-206ENST00000545266 PTPRRQ15256 657 aa6.75□□□□□ -1.33
COPA-206ENST00000545266 SF3B3Q15393 1217 aaKnown RBP6.75□□□□□ -1.33
COPA-206ENST00000545266 KLHDC7AQ5VTJ3 777 aa6.75□□□□□ -1.33
COPA-206ENST00000545266 SPICE1Q8N0Z3 855 aa6.75□□□□□ -1.33
COPA-206ENST00000545266 BPIFB1Q8TDL5 484 aa6.75□□□□□ -1.33
COPA-206ENST00000545266 LARP4BQ92615 738 aaKnown RBP6.75□□□□□ -1.33
COPA-206ENST00000545266 IQCDQ96DY2 449 aa6.75□□□□□ -1.33
COPA-206ENST00000545266 PGBD1Q96JS3 809 aa6.75□□□□□ -1.33
COPA-206ENST00000545266 Q96MF0 132 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 145.7 ms