RNA–Protein interactions for RNA: ENST00000545015.1

POLE-222, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 2

Gene POLE, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-222	ENST00000545015	GIPC2	Q8TF65	315 aa		14.33	□□□□□ -0.12
POLE-222	ENST00000545015	TAF4B	Q92750	862 aa		14.33	□□□□□ -0.12
POLE-222	ENST00000545015	SPATA17	Q96L03	361 aa		14.33	□□□□□ -0.12
POLE-222	ENST00000545015	MMS19	Q96T76	1030 aa		14.33	□□□□□ -0.12
POLE-222	ENST00000545015	NELL2	Q99435	816 aa		14.33	□□□□□ -0.12
POLE-222	ENST00000545015	MRPL45	Q9BRJ2	306 aa	Known RBP	14.33	□□□□□ -0.12
POLE-222	ENST00000545015	SLITRK6	Q9H5Y7	841 aa		14.33	□□□□□ -0.12
POLE-222	ENST00000545015	RMND1	Q9NWS8	449 aa		14.33	□□□□□ -0.12
POLE-222	ENST00000545015	UXT	Q9UBK9	157 aa	Predicted RBP	14.33	□□□□□ -0.12
POLE-222	ENST00000545015	SIT1	Q9Y3P8	196 aa		14.33	□□□□□ -0.12
POLE-222	ENST00000545015	NME7	Q9Y5B8	376 aa		14.33	□□□□□ -0.12
POLE-222	ENST00000545015	CHAD	O15335	359 aa		14.32	□□□□□ -0.12
POLE-222	ENST00000545015	PHACTR2	O75167	634 aa		14.32	□□□□□ -0.12
POLE-222	ENST00000545015	ATP2C2	O75185	946 aa		14.32	□□□□□ -0.12
POLE-222	ENST00000545015	AKAP3	O75969	853 aa		14.32	□□□□□ -0.12
POLE-222	ENST00000545015	NR2F2	P24468	414 aa		14.32	□□□□□ -0.12
POLE-222	ENST00000545015	GNL1	P36915	607 aa	Predicted RBP	14.32	□□□□□ -0.12
POLE-222	ENST00000545015	GPR15	P49685	360 aa		14.32	□□□□□ -0.12
POLE-222	ENST00000545015	DLG4	P78352	724 aa		14.32	□□□□□ -0.12
POLE-222	ENST00000545015	NCOA4	Q13772	614 aa		14.32	□□□□□ -0.12
POLE-222	ENST00000545015	TAF12	Q16514	161 aa		14.32	□□□□□ -0.12
POLE-222	ENST00000545015	CCDC142	Q17RM4	750 aa		14.32	□□□□□ -0.12
POLE-222	ENST00000545015	SGSM1	Q2NKQ1	1148 aa		14.32	□□□□□ -0.12
POLE-222	ENST00000545015	GPR158	Q5T848	1215 aa		14.32	□□□□□ -0.12
POLE-222	ENST00000545015	INTS8	Q75QN2	995 aa	Known RBP	14.32	□□□□□ -0.12
POLE-222	ENST00000545015	SV2A	Q7L0J3	742 aa		14.32	□□□□□ -0.12
POLE-222	ENST00000545015	RSPRY1	Q96DX4	576 aa		14.32	□□□□□ -0.12
POLE-222	ENST00000545015	MSANTD3	Q96H12	275 aa		14.32	□□□□□ -0.12
POLE-222	ENST00000545015	GCNA	Q96QF7	691 aa		14.32	□□□□□ -0.12
POLE-222	ENST00000545015	BRD9	Q9H8M2	597 aa		14.32	□□□□□ -0.12
POLE-222	ENST00000545015	LTB4R2	Q9NPC1	389 aa		14.32	□□□□□ -0.12
POLE-222	ENST00000545015	MAGEC2	Q9UBF1	373 aa	Predicted RBP	14.32	□□□□□ -0.12
POLE-222	ENST00000545015	SLC38A8	A6NNN8	435 aa		14.31	□□□□□ -0.12
POLE-222	ENST00000545015	PROB1	E7EW31	1015 aa		14.31	□□□□□ -0.12
POLE-222	ENST00000545015	GDI1	P31150	447 aa		14.31	□□□□□ -0.12
POLE-222	ENST00000545015	PSMC2	P35998	433 aa	Known RBP	14.31	□□□□□ -0.12
POLE-222	ENST00000545015	VAMP7	P51809	220 aa		14.31	□□□□□ -0.12
POLE-222	ENST00000545015	PSMC1	P62191	440 aa	Known RBP	14.31	□□□□□ -0.12
POLE-222	ENST00000545015	BIRC3	Q13489	604 aa		14.31	□□□□□ -0.12
POLE-222	ENST00000545015	PNOC	Q13519	176 aa		14.31	□□□□□ -0.12
POLE-222	ENST00000545015	GRM2	Q14416	872 aa		14.31	□□□□□ -0.12
POLE-222	ENST00000545015	DDR2	Q16832	855 aa		14.31	□□□□□ -0.12
POLE-222	ENST00000545015	ZNF699	Q32M78	642 aa		14.31	□□□□□ -0.12
POLE-222	ENST00000545015	ZNF667	Q5HYK9	610 aa		14.31	□□□□□ -0.12
POLE-222	ENST00000545015	ZNF658	Q5TYW1	1059 aa	Predicted RBP	14.31	□□□□□ -0.12
POLE-222	ENST00000545015	CEP135	Q66GS9	1140 aa		14.31	□□□□□ -0.12
POLE-222	ENST00000545015	ZC3H3	Q8IXZ2	948 aa	Known RBP	14.31	□□□□□ -0.12
POLE-222	ENST00000545015	CMTM8	Q8IZV2	173 aa		14.31	□□□□□ -0.12
POLE-222	ENST00000545015	ZNF687	Q8N1G0	1237 aa		14.31	□□□□□ -0.12
POLE-222	ENST00000545015	MYLPF	Q96A32	169 aa		14.31	□□□□□ -0.12
POLE-222	ENST00000545015	CLDN23	Q96B33	292 aa		14.31	□□□□□ -0.12
POLE-222	ENST00000545015	PCED1B	Q96HM7	432 aa		14.31	□□□□□ -0.12
POLE-222	ENST00000545015	C8orf48	Q96LL4	319 aa		14.31	□□□□□ -0.12
POLE-222	ENST00000545015	SLC46A2	Q9BY10	475 aa		14.31	□□□□□ -0.12
POLE-222	ENST00000545015	SNX25	Q9H3E2	840 aa		14.31	□□□□□ -0.12
POLE-222	ENST00000545015	COL4A2	P08572	1712 aa		14.31	□□□□□ -0.12
POLE-222	ENST00000545015		H0Y858	1186 aa		14.3	□□□□□ -0.12
POLE-222	ENST00000545015	STK25	O00506	426 aa		14.3	□□□□□ -0.12
POLE-222	ENST00000545015	MAN2B1	O00754	1011 aa		14.3	□□□□□ -0.12
POLE-222	ENST00000545015	ZNF263	O14978	683 aa		14.3	□□□□□ -0.12
POLE-222	ENST00000545015	TRIM66	O15016	1216 aa		14.3	□□□□□ -0.12
POLE-222	ENST00000545015	TADA3	O75528	432 aa		14.3	□□□□□ -0.12
POLE-222	ENST00000545015	SMC2	O95347	1197 aa		14.3	□□□□□ -0.12
POLE-222	ENST00000545015	ASS1	P00966	412 aa	Known RBP	14.3	□□□□□ -0.12
POLE-222	ENST00000545015	PDGFRB	P09619	1106 aa		14.3	□□□□□ -0.12
POLE-222	ENST00000545015	PFKL	P17858	780 aa		14.3	□□□□□ -0.12
POLE-222	ENST00000545015	PTPN1	P18031	435 aa	Known RBP	14.3	□□□□□ -0.12
POLE-222	ENST00000545015	RFX1	P22670	979 aa		14.3	□□□□□ -0.12
POLE-222	ENST00000545015	GTF2H1	P32780	548 aa		14.3	□□□□□ -0.12
POLE-222	ENST00000545015	NBL1	P41271	181 aa		14.3	□□□□□ -0.12
POLE-222	ENST00000545015	RPS9	P46781	194 aa	Known RBP	14.3	□□□□□ -0.12
POLE-222	ENST00000545015	CDR1	P51861	262 aa		14.3	□□□□□ -0.12
POLE-222	ENST00000545015	CYP4F8	P98187	520 aa		14.3	□□□□□ -0.12
POLE-222	ENST00000545015	ADAM9	Q13443	819 aa		14.3	□□□□□ -0.12
POLE-222	ENST00000545015	ZNF268	Q14587	947 aa	Predicted RBP	14.3	□□□□□ -0.12
POLE-222	ENST00000545015	ARHGAP29	Q52LW3	1261 aa		14.3	□□□□□ -0.12
POLE-222	ENST00000545015	C1orf228	Q6PIY5	440 aa		14.3	□□□□□ -0.12
POLE-222	ENST00000545015	ZNF852	Q6ZMS4	543 aa		14.3	□□□□□ -0.12
POLE-222	ENST00000545015	TPRG1	Q6ZUI0	275 aa		14.3	□□□□□ -0.12
POLE-222	ENST00000545015	MON1A	Q86VX9	555 aa		14.3	□□□□□ -0.12
POLE-222	ENST00000545015	FAM186B	Q8IYM0	893 aa		14.3	□□□□□ -0.12
POLE-222	ENST00000545015	CELF5	Q8N6W0	485 aa	Known RBP	14.3	□□□□□ -0.12
POLE-222	ENST00000545015	OR6B3	Q8NGW1	331 aa		14.3	□□□□□ -0.12
POLE-222	ENST00000545015	FAXDC2	Q96IV6	333 aa		14.3	□□□□□ -0.12
POLE-222	ENST00000545015	LRRC3B	Q96PB8	259 aa		14.3	□□□□□ -0.12
POLE-222	ENST00000545015	TTLL2	Q9BWV7	592 aa		14.3	□□□□□ -0.12
POLE-222	ENST00000545015	FOXQ1	Q9C009	403 aa		14.3	□□□□□ -0.12
POLE-222	ENST00000545015	KIF9	Q9HAQ2	790 aa		14.3	□□□□□ -0.12
POLE-222	ENST00000545015	HEBP1	Q9NRV9	189 aa		14.3	□□□□□ -0.12
POLE-222	ENST00000545015	NXF1	Q9UBU9	619 aa	Known RBP	14.3	□□□□□ -0.12
POLE-222	ENST00000545015	HOOK1	Q9UJC3	728 aa	Known RBP	14.3	□□□□□ -0.12
POLE-222	ENST00000545015	MAPK8IP1	Q9UQF2	711 aa		14.3	□□□□□ -0.12
POLE-222	ENST00000545015	MRPS17	Q9Y2R5	130 aa	Known RBP	14.3	□□□□□ -0.12
POLE-222	ENST00000545015	PCDHA5	Q9Y5H7	936 aa		14.3	□□□□□ -0.12
POLE-222	ENST00000545015		A8MXQ7	604 aa		14.29	□□□□□ -0.12
POLE-222	ENST00000545015	PRAMEF12	O95522	483 aa		14.29	□□□□□ -0.12
POLE-222	ENST00000545015	DCN	P07585	359 aa	Known RBP	14.29	□□□□□ -0.12
POLE-222	ENST00000545015	P4HA1	P13674	534 aa		14.29	□□□□□ -0.12
POLE-222	ENST00000545015	BDNF	P23560	247 aa		14.29	□□□□□ -0.12
POLE-222	ENST00000545015	PRCP	P42785	496 aa		14.29	□□□□□ -0.12

Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms