RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 ERAP1Q9NZ08 941 aa13.09□□□□□ -0.31
PAAF1-215ENST00000544909 ANK1P16157 1881 aa13.09□□□□□ -0.31
PAAF1-215ENST00000544909 CFAP69A5D8W1 941 aa13.09□□□□□ -0.31
PAAF1-215ENST00000544909 ENDOD1O94919 500 aa13.09□□□□□ -0.31
PAAF1-215ENST00000544909 VDRP11473 427 aa13.09□□□□□ -0.31
PAAF1-215ENST00000544909 HARSP12081 509 aaKnown RBP13.09□□□□□ -0.31
PAAF1-215ENST00000544909 KRT10P13645 584 aa13.09□□□□□ -0.31
PAAF1-215ENST00000544909 KDELR1P24390 212 aa13.09□□□□□ -0.31
PAAF1-215ENST00000544909 GTF2A1P52655 376 aaPredicted RBP13.09□□□□□ -0.31
PAAF1-215ENST00000544909 YARSP54577 528 aaKnown RBP13.09□□□□□ -0.31
PAAF1-215ENST00000544909 RAD23BP54727 409 aa13.09□□□□□ -0.31
PAAF1-215ENST00000544909 GEMIN4P57678 1058 aaKnown RBP13.09□□□□□ -0.31
PAAF1-215ENST00000544909 SNX16P57768 344 aa13.09□□□□□ -0.31
PAAF1-215ENST00000544909 MYO1EQ12965 1108 aa13.09□□□□□ -0.31
PAAF1-215ENST00000544909 TFDP2Q14188 446 aa13.09□□□□□ -0.31
PAAF1-215ENST00000544909 TTLL4Q14679 1199 aa13.09□□□□□ -0.31
PAAF1-215ENST00000544909 KCTD2Q14681 263 aa13.09□□□□□ -0.31
PAAF1-215ENST00000544909 PDK4Q16654 411 aa13.09□□□□□ -0.31
PAAF1-215ENST00000544909 FAM47CQ5HY64 1035 aa13.09□□□□□ -0.31
PAAF1-215ENST00000544909 XYLT1Q86Y38 959 aa13.09□□□□□ -0.31
PAAF1-215ENST00000544909 NAT8LQ8N9F0 302 aa13.09□□□□□ -0.31
PAAF1-215ENST00000544909 EMID1Q96A84 441 aaPredicted RBP13.09□□□□□ -0.31
PAAF1-215ENST00000544909 ACSS3Q9H6R3 686 aa13.09□□□□□ -0.31
PAAF1-215ENST00000544909 ITGA11Q9UKX5 1188 aa13.09□□□□□ -0.31
PAAF1-215ENST00000544909 ZMYND8Q9ULU4 1186 aaPredicted RBP13.09□□□□□ -0.31
PAAF1-215ENST00000544909 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.09□□□□□ -0.31
PAAF1-215ENST00000544909 SPDYE5A6NIY4 337 aa13.08□□□□□ -0.32
PAAF1-215ENST00000544909 SGK1O00141 431 aa13.08□□□□□ -0.32
PAAF1-215ENST00000544909 SOCS7O14512 581 aa13.08□□□□□ -0.32
PAAF1-215ENST00000544909 MCF2LO15068 1137 aa13.08□□□□□ -0.32
PAAF1-215ENST00000544909 TM9SF1O15321 606 aa13.08□□□□□ -0.32
PAAF1-215ENST00000544909 SRGAP2CP0DJJ0 459 aa13.08□□□□□ -0.32
PAAF1-215ENST00000544909 SETSIPP0DME0 302 aa13.08□□□□□ -0.32
PAAF1-215ENST00000544909 CCNB1P14635 433 aa13.08□□□□□ -0.32
PAAF1-215ENST00000544909 DESP17661 470 aa13.08□□□□□ -0.32
PAAF1-215ENST00000544909 TAC1P20366 129 aa13.08□□□□□ -0.32
PAAF1-215ENST00000544909 RFC1P35251 1148 aaPredicted RBP13.08□□□□□ -0.32
PAAF1-215ENST00000544909 GJC1P36383 396 aa13.08□□□□□ -0.32
PAAF1-215ENST00000544909 ZNF143P52747 638 aaPredicted RBP13.08□□□□□ -0.32
PAAF1-215ENST00000544909 PSMC1P62191 440 aaKnown RBP13.08□□□□□ -0.32
PAAF1-215ENST00000544909 SPRED3Q2MJR0 410 aa13.08□□□□□ -0.32
PAAF1-215ENST00000544909 HSDL1Q3SXM5 330 aa13.08□□□□□ -0.32
PAAF1-215ENST00000544909 DAB2IPQ5VWQ8 1189 aa13.08□□□□□ -0.32
PAAF1-215ENST00000544909 KAZNQ674X7 775 aa13.08□□□□□ -0.32
PAAF1-215ENST00000544909 CCDC91Q7Z6B0 441 aa13.08□□□□□ -0.32
PAAF1-215ENST00000544909 DEFB132Q7Z7B7 95 aa13.08□□□□□ -0.32
PAAF1-215ENST00000544909 ZBTB33Q86T24 672 aa13.08□□□□□ -0.32
PAAF1-215ENST00000544909 DHX37Q8IY37 1157 aaKnown RBP13.08□□□□□ -0.32
PAAF1-215ENST00000544909 PDIK1LQ8N165 341 aa13.08□□□□□ -0.32
PAAF1-215ENST00000544909 ACTL9Q8TC94 416 aa13.08□□□□□ -0.32
PAAF1-215ENST00000544909 FBF1Q8TES7 1133 aa13.08□□□□□ -0.32
PAAF1-215ENST00000544909 FGD4Q96M96 766 aa13.08□□□□□ -0.32
PAAF1-215ENST00000544909 SPATA33Q96N06 139 aa13.08□□□□□ -0.32
PAAF1-215ENST00000544909 TBCBQ99426 244 aa13.08□□□□□ -0.32
PAAF1-215ENST00000544909 SGIP1Q9BQI5 828 aa13.08□□□□□ -0.32
PAAF1-215ENST00000544909 ASCC2Q9H1I8 757 aaPredicted RBP13.08□□□□□ -0.32
PAAF1-215ENST00000544909 TRABDQ9H4I3 376 aa13.08□□□□□ -0.32
PAAF1-215ENST00000544909 CTNNAL1Q9UBT7 734 aa13.08□□□□□ -0.32
PAAF1-215ENST00000544909 SIX4Q9UIU6 781 aa13.08□□□□□ -0.32
PAAF1-215ENST00000544909 TTLL13PA6NNM8 815 aa13.07□□□□□ -0.32
PAAF1-215ENST00000544909 PI4K2BG5E9Z4 385 aa13.07□□□□□ -0.32
PAAF1-215ENST00000544909 INO80B-WBP1J3KQ70 363 aa13.07□□□□□ -0.32
PAAF1-215ENST00000544909 HNRNPCL1O60812 293 aaKnown RBP13.07□□□□□ -0.32
PAAF1-215ENST00000544909 CNMDO75829 334 aa13.07□□□□□ -0.32
PAAF1-215ENST00000544909 C22orf31O95567 290 aa13.07□□□□□ -0.32
PAAF1-215ENST00000544909 CETPP11597 493 aa13.07□□□□□ -0.32
PAAF1-215ENST00000544909 GCAP28676 217 aa13.07□□□□□ -0.32
PAAF1-215ENST00000544909 HIRAP54198 1017 aaPredicted RBP13.07□□□□□ -0.32
PAAF1-215ENST00000544909 OTUD4Q01804 1114 aaKnown RBP13.07□□□□□ -0.32
PAAF1-215ENST00000544909 PPIL2Q13356 520 aa13.07□□□□□ -0.32
PAAF1-215ENST00000544909 MPP2Q14168 576 aa13.07□□□□□ -0.32
PAAF1-215ENST00000544909 LLGL1Q15334 1064 aa13.07□□□□□ -0.32
PAAF1-215ENST00000544909 PCBP1Q15365 356 aaKnown RBP eCLIP13.07□□□□□ -0.32
PAAF1-215ENST00000544909 LY6KQ17RY6 165 aa13.07□□□□□ -0.32
PAAF1-215ENST00000544909 ATP13A4Q4VNC1 1196 aa13.07□□□□□ -0.32
PAAF1-215ENST00000544909 WLSQ5T9L3 541 aa13.07□□□□□ -0.32
PAAF1-215ENST00000544909 CYP4F22Q6NT55 531 aa13.07□□□□□ -0.32
PAAF1-215ENST00000544909 ADGRD1Q6QNK2 874 aa13.07□□□□□ -0.32
PAAF1-215ENST00000544909 ILDR2Q71H61 639 aa13.07□□□□□ -0.32
PAAF1-215ENST00000544909 FASTKD5Q7L8L6 764 aaKnown RBP13.07□□□□□ -0.32
PAAF1-215ENST00000544909 APBB1IPQ7Z5R6 666 aaPredicted RBP13.07□□□□□ -0.32
PAAF1-215ENST00000544909 PHLDB2Q86SQ0 1253 aa13.07□□□□□ -0.32
PAAF1-215ENST00000544909 RHPN2Q8IUC4 686 aa13.07□□□□□ -0.32
PAAF1-215ENST00000544909 ANKRD13AQ8IZ07 590 aa13.07□□□□□ -0.32
PAAF1-215ENST00000544909 CYP4X1Q8N118 509 aa13.07□□□□□ -0.32
PAAF1-215ENST00000544909 LINC01465Q8N7H1 131 aa13.07□□□□□ -0.32
PAAF1-215ENST00000544909 C1orf127Q8N9H9 656 aa13.07□□□□□ -0.32
PAAF1-215ENST00000544909 CXorf38Q8TB03 319 aa13.07□□□□□ -0.32
PAAF1-215ENST00000544909 TEKT4Q8WW24 435 aa13.07□□□□□ -0.32
PAAF1-215ENST00000544909 RSAD2Q8WXG1 361 aa13.07□□□□□ -0.32
PAAF1-215ENST00000544909 RTP4Q96DX8 246 aa13.07□□□□□ -0.32
PAAF1-215ENST00000544909 TMEM176AQ96HP8 235 aa13.07□□□□□ -0.32
PAAF1-215ENST00000544909 CNPY3Q9BT09 278 aa13.07□□□□□ -0.32
PAAF1-215ENST00000544909 INO80BQ9C086 356 aaPredicted RBP13.07□□□□□ -0.32
PAAF1-215ENST00000544909 ADARB2Q9NS39 739 aaKnown RBP13.07□□□□□ -0.32
PAAF1-215ENST00000544909 BARX2Q9UMQ3 279 aaPredicted RBP13.07□□□□□ -0.32
PAAF1-215ENST00000544909 DERAQ9Y315 318 aa13.07□□□□□ -0.32
PAAF1-215ENST00000544909 TYROBPO43914 113 aa13.06□□□□□ -0.32
PAAF1-215ENST00000544909 CST8O60676 142 aa13.06□□□□□ -0.32
PAAF1-215ENST00000544909 DCTN3O75935 186 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms