RNA–Protein interactions for RNA: ENST00000544891.6

NECAP1-207, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 4,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-207ENST00000544891 FAM83EQ2M2I3 478 aa9.38□□□□□ -0.91
NECAP1-207ENST00000544891 SYTL3Q4VX76 610 aa9.38□□□□□ -0.91
NECAP1-207ENST00000544891 MRNIPQ6NTE8 343 aa9.38□□□□□ -0.91
NECAP1-207ENST00000544891 MPZL3Q6UWV2 235 aa9.38□□□□□ -0.91
NECAP1-207ENST00000544891 RGS9BPQ6ZS82 235 aa9.38□□□□□ -0.91
NECAP1-207ENST00000544891 CDK5RAP1Q96SZ6 601 aaKnown RBP9.38□□□□□ -0.91
NECAP1-207ENST00000544891 CGRRF1Q99675 332 aa9.38□□□□□ -0.91
NECAP1-207ENST00000544891 TARS2Q9BW92 718 aaKnown RBP9.38□□□□□ -0.91
NECAP1-207ENST00000544891 DRG1Q9Y295 367 aaKnown RBP9.38□□□□□ -0.91
NECAP1-207ENST00000544891 FAM95CA0A1B0GW59 222 aa9.38□□□□□ -0.91
NECAP1-207ENST00000544891 KANSL1LA0AUZ9 987 aa9.38□□□□□ -0.91
NECAP1-207ENST00000544891 FAM205CA6NFA0 338 aa9.38□□□□□ -0.91
NECAP1-207ENST00000544891 TCP11X1B4DZS4 312 aa9.38□□□□□ -0.91
NECAP1-207ENST00000544891 CTDNEP1O95476 244 aa9.38□□□□□ -0.91
NECAP1-207ENST00000544891 WEE2P0C1S8 567 aa9.38□□□□□ -0.91
NECAP1-207ENST00000544891 PAX3P23760 479 aa9.38□□□□□ -0.91
NECAP1-207ENST00000544891 ALDH1A3P47895 512 aa9.38□□□□□ -0.91
NECAP1-207ENST00000544891 STX5Q13190 355 aa9.38□□□□□ -0.91
NECAP1-207ENST00000544891 PTK7Q13308 1070 aa9.38□□□□□ -0.91
NECAP1-207ENST00000544891 SLC15A2Q16348 729 aa9.38□□□□□ -0.91
NECAP1-207ENST00000544891 RBBP7Q16576 425 aa9.38□□□□□ -0.91
NECAP1-207ENST00000544891 SUGP1Q8IWZ8 645 aaKnown RBP9.38□□□□□ -0.91
NECAP1-207ENST00000544891 PCSK9Q8NBP7 692 aaKnown RBP9.38□□□□□ -0.91
NECAP1-207ENST00000544891 CPA5Q8WXQ8 436 aa9.38□□□□□ -0.91
NECAP1-207ENST00000544891 FAM163AQ96GL9 167 aaPredicted RBP9.38□□□□□ -0.91
NECAP1-207ENST00000544891 VCPIP1Q96JH7 1222 aa9.38□□□□□ -0.91
NECAP1-207ENST00000544891 CCT8L2Q96SF2 557 aa9.38□□□□□ -0.91
NECAP1-207ENST00000544891 BRD8Q9H0E9 1235 aa9.38□□□□□ -0.91
NECAP1-207ENST00000544891 WHRNQ9P202 907 aa9.38□□□□□ -0.91
NECAP1-207ENST00000544891 TCRBV5S4A2TA0A5A2 114 aa9.38□□□□□ -0.91
NECAP1-207ENST00000544891 USP27XA6NNY8 438 aa9.38□□□□□ -0.91
NECAP1-207ENST00000544891 POLRMTO00411 1230 aaKnown RBP9.38□□□□□ -0.91
NECAP1-207ENST00000544891 CLASP2O75122 1294 aaKnown RBP9.38□□□□□ -0.91
NECAP1-207ENST00000544891 BACE1P56817 501 aa9.38□□□□□ -0.91
NECAP1-207ENST00000544891 CUL3Q13618 768 aa9.38□□□□□ -0.91
NECAP1-207ENST00000544891 PCNX4Q63HM2 1172 aa9.38□□□□□ -0.91
NECAP1-207ENST00000544891 TRIM65Q6PJ69 517 aa9.38□□□□□ -0.91
NECAP1-207ENST00000544891 RINLQ6ZS11 566 aa9.38□□□□□ -0.91
NECAP1-207ENST00000544891 LRRC6Q86X45 466 aa9.38□□□□□ -0.91
NECAP1-207ENST00000544891 TBCBQ99426 244 aa9.38□□□□□ -0.91
NECAP1-207ENST00000544891 NDEL1Q9GZM8 345 aa9.38□□□□□ -0.91
NECAP1-207ENST00000544891 MPP6Q9NZW5 540 aa9.38□□□□□ -0.91
NECAP1-207ENST00000544891 C17orf102A2RUQ5 167 aa9.38□□□□□ -0.91
NECAP1-207ENST00000544891 APOA1P02647 267 aa9.38□□□□□ -0.91
NECAP1-207ENST00000544891 HSPA13P48723 471 aa9.38□□□□□ -0.91
NECAP1-207ENST00000544891 ZNF157P51786 506 aaPredicted RBP9.38□□□□□ -0.91
NECAP1-207ENST00000544891 MAPK7Q13164 816 aa9.38□□□□□ -0.91
NECAP1-207ENST00000544891 TDRD10Q5VZ19 366 aaKnown RBP9.38□□□□□ -0.91
NECAP1-207ENST00000544891 LRRC43Q8N309 656 aa9.38□□□□□ -0.91
NECAP1-207ENST00000544891 HIPK4Q8NE63 616 aa9.38□□□□□ -0.91
NECAP1-207ENST00000544891 TPCN2Q8NHX9 752 aa9.38□□□□□ -0.91
NECAP1-207ENST00000544891 SPIRE2Q8WWL2 714 aa9.38□□□□□ -0.91
NECAP1-207ENST00000544891 PABPC3Q9H361 631 aaKnown RBP9.38□□□□□ -0.91
NECAP1-207ENST00000544891 COG4Q9H9E3 785 aa9.38□□□□□ -0.91
NECAP1-207ENST00000544891 L2HGDHQ9H9P8 463 aa9.38□□□□□ -0.91
NECAP1-207ENST00000544891 CDV3Q9UKY7 258 aaKnown RBP9.38□□□□□ -0.91
NECAP1-207ENST00000544891 NPHP3-ACAD11A0A0J9YXS1 232 aa9.37□□□□□ -0.91
NECAP1-207ENST00000544891 C5orf58C9J3I9 102 aa9.37□□□□□ -0.91
NECAP1-207ENST00000544891 CXCL11O14625 94 aa9.37□□□□□ -0.91
NECAP1-207ENST00000544891 PRRG1O14668 218 aa9.37□□□□□ -0.91
NECAP1-207ENST00000544891 BCAT1P54687 386 aa9.37□□□□□ -0.91
NECAP1-207ENST00000544891 GEMIN4P57678 1058 aaKnown RBP9.37□□□□□ -0.91
NECAP1-207ENST00000544891 LRRC8EQ6NSJ5 796 aa9.37□□□□□ -0.91
NECAP1-207ENST00000544891 WDR49Q8IV35 697 aa9.37□□□□□ -0.91
NECAP1-207ENST00000544891 UCMAQ8WVF2 138 aa9.37□□□□□ -0.91
NECAP1-207ENST00000544891 TUBGCP4Q9UGJ1 667 aa9.37□□□□□ -0.91
NECAP1-207ENST00000544891 AKAP11Q9UKA4 1901 aa9.37□□□□□ -0.91
NECAP1-207ENST00000544891 MYH13Q9UKX3 1938 aa9.37□□□□□ -0.91
NECAP1-207ENST00000544891 A0A0G2JLW4 131 aa9.37□□□□□ -0.91
NECAP1-207ENST00000544891 GLRA3O75311 464 aa9.37□□□□□ -0.91
NECAP1-207ENST00000544891 IL1R1P14778 569 aa9.37□□□□□ -0.91
NECAP1-207ENST00000544891 HOXB8P17481 243 aaPredicted RBP9.37□□□□□ -0.91
NECAP1-207ENST00000544891 FGFR4P22455 802 aa9.37□□□□□ -0.91
NECAP1-207ENST00000544891 KLRC1P26715 233 aa9.37□□□□□ -0.91
NECAP1-207ENST00000544891 LHX1P48742 406 aa9.37□□□□□ -0.91
NECAP1-207ENST00000544891 GRIN1Q05586 938 aa9.37□□□□□ -0.91
NECAP1-207ENST00000544891 GRB10Q13322 594 aa9.37□□□□□ -0.91
NECAP1-207ENST00000544891 BFSP2Q13515 415 aa9.37□□□□□ -0.91
NECAP1-207ENST00000544891 LMBRD2Q68DH5 695 aaPredicted RBP9.37□□□□□ -0.91
NECAP1-207ENST00000544891 C3orf62Q6ZUJ4 267 aa9.37□□□□□ -0.91
NECAP1-207ENST00000544891 CHSY1Q86X52 802 aa9.37□□□□□ -0.91
NECAP1-207ENST00000544891 ZDHHC17Q8IUH5 632 aa9.37□□□□□ -0.91
NECAP1-207ENST00000544891 TAGAPQ8N103 731 aa9.37□□□□□ -0.91
NECAP1-207ENST00000544891 SLC30A5Q8TAD4 765 aa9.37□□□□□ -0.91
NECAP1-207ENST00000544891 ACTRT1Q8TDG2 376 aa9.37□□□□□ -0.91
NECAP1-207ENST00000544891 TFB1MQ8WVM0 346 aaKnown RBP9.37□□□□□ -0.91
NECAP1-207ENST00000544891 CLMNQ96JQ2 1002 aa9.37□□□□□ -0.91
NECAP1-207ENST00000544891 LBHD1Q9BQE6 289 aaPredicted RBP9.37□□□□□ -0.91
NECAP1-207ENST00000544891 POLD4Q9HCU8 107 aa9.37□□□□□ -0.91
NECAP1-207ENST00000544891 ABCF3Q9NUQ8 709 aa9.37□□□□□ -0.91
NECAP1-207ENST00000544891 SMARCAL1Q9NZC9 954 aa9.37□□□□□ -0.91
NECAP1-207ENST00000544891 SELENONQ9NZV5 590 aa9.37□□□□□ -0.91
NECAP1-207ENST00000544891 PKP3Q9Y446 797 aa9.37□□□□□ -0.91
NECAP1-207ENST00000544891 RSPH10B2B2RC85 870 aa9.37□□□□□ -0.91
NECAP1-207ENST00000544891 CES2O00748 559 aa9.37□□□□□ -0.91
NECAP1-207ENST00000544891 RSPH10BP0C881 870 aa9.37□□□□□ -0.91
NECAP1-207ENST00000544891 PSMA3P25788 255 aa9.37□□□□□ -0.91
NECAP1-207ENST00000544891 RAB27AP51159 221 aa9.37□□□□□ -0.91
NECAP1-207ENST00000544891 SEC23AQ15436 765 aa9.37□□□□□ -0.91
NECAP1-207ENST00000544891 GNASQ5JWF2 1037 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms