RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 CSH1P0DML2 217 aa13.84□□□□□ -0.19
USP28-212ENST00000544750 CSH2P0DML3 217 aa13.84□□□□□ -0.19
USP28-212ENST00000544750 BCKDHBP21953 392 aa13.84□□□□□ -0.19
USP28-212ENST00000544750 TAF6P49848 677 aa13.84□□□□□ -0.19
USP28-212ENST00000544750 DGKEP52429 567 aa13.84□□□□□ -0.19
USP28-212ENST00000544750 ZNF131P52739 623 aa13.84□□□□□ -0.19
USP28-212ENST00000544750 FAM160A1Q05DH4 1040 aa13.84□□□□□ -0.19
USP28-212ENST00000544750 TMEM119Q4V9L6 283 aa13.84□□□□□ -0.19
USP28-212ENST00000544750 CC2D1AQ6P1N0 951 aaPredicted RBP13.84□□□□□ -0.19
USP28-212ENST00000544750 C11orf74Q86VG3 221 aa13.84□□□□□ -0.19
USP28-212ENST00000544750 THEM5Q8N1Q8 247 aa13.84□□□□□ -0.19
USP28-212ENST00000544750 PIAS4Q8N2W9 510 aaPredicted RBP13.84□□□□□ -0.19
USP28-212ENST00000544750 CPA6Q8N4T0 437 aa13.84□□□□□ -0.19
USP28-212ENST00000544750 USP33Q8TEY7 942 aa13.84□□□□□ -0.19
USP28-212ENST00000544750 LRRC15Q8TF66 581 aa13.84□□□□□ -0.19
USP28-212ENST00000544750 MRPS31Q92665 395 aaKnown RBP13.84□□□□□ -0.19
USP28-212ENST00000544750 MYRFLQ96LU7 910 aa13.84□□□□□ -0.19
USP28-212ENST00000544750 ZSCAN31Q96LW9 406 aaPredicted RBP13.84□□□□□ -0.19
USP28-212ENST00000544750 FIZ1Q96SL8 496 aa13.84□□□□□ -0.19
USP28-212ENST00000544750 PYM1Q9BRP8 204 aaKnown RBP13.84□□□□□ -0.19
USP28-212ENST00000544750 MSTO1Q9BUK6 570 aa13.84□□□□□ -0.19
USP28-212ENST00000544750 ASB7Q9H672 318 aa13.84□□□□□ -0.19
USP28-212ENST00000544750 UPF2Q9HAU5 1272 aaKnown RBP13.84□□□□□ -0.19
USP28-212ENST00000544750 ODF2LQ9ULJ1 636 aa13.84□□□□□ -0.19
USP28-212ENST00000544750 INVSQ9Y283 1065 aa13.84□□□□□ -0.19
USP28-212ENST00000544750 PCDHB5Q9Y5E4 795 aa13.84□□□□□ -0.19
USP28-212ENST00000544750 PCDH15Q96QU1 1955 aa13.83□□□□□ -0.19
USP28-212ENST00000544750 KHNYNO15037 678 aaKnown RBP13.83□□□□□ -0.2
USP28-212ENST00000544750 NOL4O94818 638 aa13.83□□□□□ -0.2
USP28-212ENST00000544750 CHRM1P11229 460 aaPredicted RBP13.83□□□□□ -0.2
USP28-212ENST00000544750 TCF3P15923 654 aa13.83□□□□□ -0.2
USP28-212ENST00000544750 SCP2P22307 547 aa13.83□□□□□ -0.2
USP28-212ENST00000544750 GBP1P32455 592 aa13.83□□□□□ -0.2
USP28-212ENST00000544750 IRX4P78413 519 aa13.83□□□□□ -0.2
USP28-212ENST00000544750 HMGN5P82970 282 aaKnown RBP13.83□□□□□ -0.2
USP28-212ENST00000544750 GNL2Q13823 731 aaKnown RBP13.83□□□□□ -0.2
USP28-212ENST00000544750 GAB4Q2WGN9 574 aa13.83□□□□□ -0.2
USP28-212ENST00000544750 METTL23Q86XA0 190 aa13.83□□□□□ -0.2
USP28-212ENST00000544750 DCP1BQ8IZD4 617 aaKnown RBP13.83□□□□□ -0.2
USP28-212ENST00000544750 OLIG1Q8TAK6 271 aa13.83□□□□□ -0.2
USP28-212ENST00000544750 LEO1Q8WVC0 666 aaPredicted RBP13.83□□□□□ -0.2
USP28-212ENST00000544750 EXOC4Q96A65 974 aa13.83□□□□□ -0.2
USP28-212ENST00000544750 FAM212AQ96EL1 285 aa13.83□□□□□ -0.2
USP28-212ENST00000544750 TRMT2BQ96GJ1 504 aaKnown RBP13.83□□□□□ -0.2
USP28-212ENST00000544750 CNOT6LQ96LI5 555 aaKnown RBP13.83□□□□□ -0.2
USP28-212ENST00000544750 CYP2S1Q96SQ9 504 aa13.83□□□□□ -0.2
USP28-212ENST00000544750 REEP2Q9BRK0 252 aa13.83□□□□□ -0.2
USP28-212ENST00000544750 TPSD1Q9BZJ3 242 aa13.83□□□□□ -0.2
USP28-212ENST00000544750 DUS2Q9NX74 493 aaKnown RBP13.83□□□□□ -0.2
USP28-212ENST00000544750 EVLQ9UI08 416 aaPredicted RBP13.83□□□□□ -0.2
USP28-212ENST00000544750 ANKRD63C9JTQ0 380 aa13.82□□□□□ -0.2
USP28-212ENST00000544750 K7EQS6 105 aa13.82□□□□□ -0.2
USP28-212ENST00000544750 OPRD1P41143 372 aa13.82□□□□□ -0.2
USP28-212ENST00000544750 ACOT2P49753 483 aa13.82□□□□□ -0.2
USP28-212ENST00000544750 ATP2C1P98194 919 aaPredicted RBP13.82□□□□□ -0.2
USP28-212ENST00000544750 GTF2BQ00403 316 aa13.82□□□□□ -0.2
USP28-212ENST00000544750 ACAP1Q15027 740 aa13.82□□□□□ -0.2
USP28-212ENST00000544750 ZRSR1Q15695 479 aaKnown RBP13.82□□□□□ -0.2
USP28-212ENST00000544750 USP39Q53GS9 565 aaKnown RBP13.82□□□□□ -0.2
USP28-212ENST00000544750 SDHAF4Q5VUM1 108 aa13.82□□□□□ -0.2
USP28-212ENST00000544750 EFCAB13Q8IY85 973 aa13.82□□□□□ -0.2
USP28-212ENST00000544750 TSTD1Q8NFU3 115 aa13.82□□□□□ -0.2
USP28-212ENST00000544750 ATP2A3Q93084 1043 aa13.82□□□□□ -0.2
USP28-212ENST00000544750 PLIN2Q99541 437 aa13.82□□□□□ -0.2
USP28-212ENST00000544750 PKMYT1Q99640 499 aa13.82□□□□□ -0.2
USP28-212ENST00000544750 PI4K2AQ9BTU6 479 aa13.82□□□□□ -0.2
USP28-212ENST00000544750 TMEM206Q9H813 350 aa13.82□□□□□ -0.2
USP28-212ENST00000544750 DPP3Q9NY33 737 aa13.82□□□□□ -0.2
USP28-212ENST00000544750 GCNT4Q9P109 453 aa13.82□□□□□ -0.2
USP28-212ENST00000544750 MAGED2Q9UNF1 606 aaPredicted RBP13.82□□□□□ -0.2
USP28-212ENST00000544750 WNT6Q9Y6F9 365 aa13.82□□□□□ -0.2
USP28-212ENST00000544750 STYXL1Q9Y6J8 313 aa13.82□□□□□ -0.2
USP28-212ENST00000544750 FREM2Q5SZK8 3169 aa13.82□□□□□ -0.2
USP28-212ENST00000544750 PLXNB3Q9ULL4 1909 aa13.82□□□□□ -0.2
USP28-212ENST00000544750 ITPR1Q14643 2758 aa13.82□□□□□ -0.2
USP28-212ENST00000544750 KPNA7A9QM74 516 aa13.81□□□□□ -0.2
USP28-212ENST00000544750 TISP43B9A030 160 aa13.81□□□□□ -0.2
USP28-212ENST00000544750 K7ENM7 598 aa13.81□□□□□ -0.2
USP28-212ENST00000544750 PRPF40AO75400 957 aaKnown RBP13.81□□□□□ -0.2
USP28-212ENST00000544750 HNRNPLP14866 589 aaKnown RBP eCLIP13.81□□□□□ -0.2
USP28-212ENST00000544750 POU5F1Q01860 360 aaKnown RBP13.81□□□□□ -0.2
USP28-212ENST00000544750 PSMD2Q13200 908 aa13.81□□□□□ -0.2
USP28-212ENST00000544750 NFE2Q16621 373 aaPredicted RBP13.81□□□□□ -0.2
USP28-212ENST00000544750 LRSAM1Q6UWE0 723 aa13.81□□□□□ -0.2
USP28-212ENST00000544750 CRELD2Q6UXH1 353 aaPredicted RBP13.81□□□□□ -0.2
USP28-212ENST00000544750 CYP2U1Q7Z449 544 aa13.81□□□□□ -0.2
USP28-212ENST00000544750 DEFB124Q8NES8 71 aa13.81□□□□□ -0.2
USP28-212ENST00000544750 MDGA1Q8NFP4 955 aa13.81□□□□□ -0.2
USP28-212ENST00000544750 LINC00597Q9H2U6 94 aa13.81□□□□□ -0.2
USP28-212ENST00000544750 ABCB6Q9NP58 842 aa13.81□□□□□ -0.2
USP28-212ENST00000544750 UXTQ9UBK9 157 aaPredicted RBP13.81□□□□□ -0.2
USP28-212ENST00000544750 MMP17Q9ULZ9 603 aa13.81□□□□□ -0.2
USP28-212ENST00000544750 NEUROG3Q9Y4Z2 214 aa13.81□□□□□ -0.2
USP28-212ENST00000544750 TRAK2O60296 914 aa13.8□□□□□ -0.2
USP28-212ENST00000544750 CAPNS1P04632 268 aa13.8□□□□□ -0.2
USP28-212ENST00000544750 USP17L7P0C7H9 530 aa13.8□□□□□ -0.2
USP28-212ENST00000544750 CYP2F1P24903 491 aa13.8□□□□□ -0.2
USP28-212ENST00000544750 IFNAR2P48551 515 aa13.8□□□□□ -0.2
USP28-212ENST00000544750 ZXDBP98169 803 aa13.8□□□□□ -0.2
USP28-212ENST00000544750 RING1Q06587 406 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms