RNA–Protein interactions for RNA: ENST00000544551.5

RDX-218, Transcript of radixin, humanhuman

TSL 2 BASIC

Gene RDX, Length 4,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-218ENST00000544551 C12orf29Q8N999 325 aa15.58■□□□□ 0.08
RDX-218ENST00000544551 TSNARE1Q96NA8 513 aa15.58■□□□□ 0.08
RDX-218ENST00000544551 CYP4F11Q9HBI6 524 aa15.58■□□□□ 0.08
RDX-218ENST00000544551 CCDC160A6NGH7 325 aa15.58■□□□□ 0.08
RDX-218ENST00000544551 CD48P09326 243 aa15.58■□□□□ 0.08
RDX-218ENST00000544551 KCNA2P16389 499 aa15.58■□□□□ 0.08
RDX-218ENST00000544551 EPHB1P54762 984 aa15.58■□□□□ 0.08
RDX-218ENST00000544551 SNRPFP62306 86 aaKnown RBP15.58■□□□□ 0.08
RDX-218ENST00000544551 AP1B1Q10567 949 aa15.58■□□□□ 0.08
RDX-218ENST00000544551 TAF5Q15542 800 aa15.58■□□□□ 0.08
RDX-218ENST00000544551 SDCCAG8Q86SQ7 713 aaPredicted RBP15.58■□□□□ 0.08
RDX-218ENST00000544551 EIF1ADQ8N9N8 165 aaKnown RBP15.58■□□□□ 0.08
RDX-218ENST00000544551 ARMC2Q8NEN0 867 aa15.58■□□□□ 0.08
RDX-218ENST00000544551 PAFAH2Q99487 392 aa15.58■□□□□ 0.08
RDX-218ENST00000544551 SNX25Q9H3E2 840 aa15.58■□□□□ 0.08
RDX-218ENST00000544551 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.58■□□□□ 0.08
RDX-218ENST00000544551 TRIM49D1C9J1S8 452 aa15.58■□□□□ 0.08
RDX-218ENST00000544551 ADM5C9JUS6 153 aa15.58■□□□□ 0.08
RDX-218ENST00000544551 ZNF286BP0CG31 522 aa15.58■□□□□ 0.08
RDX-218ENST00000544551 ARL1P40616 181 aaPredicted RBP15.58■□□□□ 0.08
RDX-218ENST00000544551 GAD2Q05329 585 aa15.58■□□□□ 0.08
RDX-218ENST00000544551 TFDP2Q14188 446 aa15.58■□□□□ 0.08
RDX-218ENST00000544551 KCNV1Q6PIU1 500 aa15.58■□□□□ 0.08
RDX-218ENST00000544551 SYDE1Q6ZW31 735 aaPredicted RBP15.58■□□□□ 0.08
RDX-218ENST00000544551 CNPY4Q8N129 248 aa15.58■□□□□ 0.08
RDX-218ENST00000544551 SAMD3Q8N6K7 520 aa15.58■□□□□ 0.08
RDX-218ENST00000544551 TTC13Q8NBP0 860 aa15.58■□□□□ 0.08
RDX-218ENST00000544551 RXFP2Q8WXD0 754 aa15.58■□□□□ 0.08
RDX-218ENST00000544551 TTC1Q99614 292 aa15.58■□□□□ 0.08
RDX-218ENST00000544551 A0A1B0GUL6 1792 aa15.57■□□□□ 0.08
RDX-218ENST00000544551 GOLGA4Q13439 2230 aaKnown RBP15.57■□□□□ 0.08
RDX-218ENST00000544551 CIB2O75838 187 aa15.57■□□□□ 0.08
RDX-218ENST00000544551 HAUS5O94927 633 aa15.57■□□□□ 0.08
RDX-218ENST00000544551 ZNF541Q9H0D2 1346 aa15.57■□□□□ 0.08
RDX-218ENST00000544551 KRT37O76014 449 aa15.57■□□□□ 0.08
RDX-218ENST00000544551 ENO1P06733 434 aaKnown RBP15.57■□□□□ 0.08
RDX-218ENST00000544551 STAG3L1P0CL83 205 aa15.57■□□□□ 0.08
RDX-218ENST00000544551 ELK3P41970 407 aa15.57■□□□□ 0.08
RDX-218ENST00000544551 VCPP55072 806 aaKnown RBP15.57■□□□□ 0.08
RDX-218ENST00000544551 MXD4Q14582 209 aaPredicted RBP15.57■□□□□ 0.08
RDX-218ENST00000544551 SURF1Q15526 300 aa15.57■□□□□ 0.08
RDX-218ENST00000544551 TREML2Q5T2D2 321 aa15.57■□□□□ 0.08
RDX-218ENST00000544551 APOBEC3FQ8IUX4 373 aaKnown RBP15.57■□□□□ 0.08
RDX-218ENST00000544551 TCP10LQ8TDR4 215 aa15.57■□□□□ 0.08
RDX-218ENST00000544551 FAM167AQ96KS9 214 aa15.57■□□□□ 0.08
RDX-218ENST00000544551 KLC2Q9H0B6 622 aa15.57■□□□□ 0.08
RDX-218ENST00000544551 CXorf56Q9H5V9 222 aa15.57■□□□□ 0.08
RDX-218ENST00000544551 DDX56Q9NY93 547 aaKnown RBP15.57■□□□□ 0.08
RDX-218ENST00000544551 ANKRD36CQ5JPF3 1778 aa15.57■□□□□ 0.08
RDX-218ENST00000544551 MIPP30301 263 aa15.57■□□□□ 0.08
RDX-218ENST00000544551 ARL4AP40617 200 aa15.57■□□□□ 0.08
RDX-218ENST00000544551 ELF3P78545 371 aaPredicted RBP15.57■□□□□ 0.08
RDX-218ENST00000544551 PTK6Q13882 451 aa15.57■□□□□ 0.08
RDX-218ENST00000544551 IER5Q5VY09 327 aa15.57■□□□□ 0.08
RDX-218ENST00000544551 RDM1Q8NG50 284 aa15.57■□□□□ 0.08
RDX-218ENST00000544551 TFAP2BQ92481 460 aa15.57■□□□□ 0.08
RDX-218ENST00000544551 DDX27Q96GQ7 796 aaKnown RBP15.57■□□□□ 0.08
RDX-218ENST00000544551 TSSK1BQ9BXA7 367 aa15.57■□□□□ 0.08
RDX-218ENST00000544551 ARMCX1Q9P291 453 aa15.57■□□□□ 0.08
RDX-218ENST00000544551 HEY2Q9UBP5 337 aa15.57■□□□□ 0.08
RDX-218ENST00000544551 DNALI1O14645 258 aaPredicted RBP15.56■□□□□ 0.08
RDX-218ENST00000544551 DCTN3O75935 186 aa15.56■□□□□ 0.08
RDX-218ENST00000544551 UPP2O95045 317 aa15.56■□□□□ 0.08
RDX-218ENST00000544551 PYGBP11216 843 aa15.56■□□□□ 0.08
RDX-218ENST00000544551 IREB2P48200 963 aaKnown RBP15.56■□□□□ 0.08
RDX-218ENST00000544551 ALDH18A1P54886 795 aaKnown RBP15.56■□□□□ 0.08
RDX-218ENST00000544551 TMEM132DQ14C87 1099 aa15.56■□□□□ 0.08
RDX-218ENST00000544551 TSNAXIP1Q2TAA8 658 aa15.56■□□□□ 0.08
RDX-218ENST00000544551 NUDCD3Q8IVD9 361 aa15.56■□□□□ 0.08
RDX-218ENST00000544551 FAM161BQ96MY7 647 aa15.56■□□□□ 0.08
RDX-218ENST00000544551 ACAP3Q96P50 834 aa15.56■□□□□ 0.08
RDX-218ENST00000544551 LRRC4Q9HBW1 653 aa15.56■□□□□ 0.08
RDX-218ENST00000544551 USP18Q9UMW8 372 aa15.56■□□□□ 0.08
RDX-218ENST00000544551 USH1CQ9Y6N9 552 aa15.56■□□□□ 0.08
RDX-218ENST00000544551 STK10O94804 968 aaKnown RBP15.56■□□□□ 0.08
RDX-218ENST00000544551 ATP6V1G2O95670 118 aa15.56■□□□□ 0.08
RDX-218ENST00000544551 NFICP08651 508 aa15.56■□□□□ 0.08
RDX-218ENST00000544551 TTLL4Q14679 1199 aa15.56■□□□□ 0.08
RDX-218ENST00000544551 ABHD15Q6UXT9 468 aa15.56■□□□□ 0.08
RDX-218ENST00000544551 LMNTD2Q8IXW0 634 aa15.56■□□□□ 0.08
RDX-218ENST00000544551 RMDN2Q96LZ7 410 aa15.56■□□□□ 0.08
RDX-218ENST00000544551 SPATC1LQ9H0A9 340 aa15.56■□□□□ 0.08
RDX-218ENST00000544551 KDM4CQ9H3R0 1056 aa15.56■□□□□ 0.08
RDX-218ENST00000544551 RNF181Q9P0P0 153 aa15.56■□□□□ 0.08
RDX-218ENST00000544551 C2orf71A6NGG8 1288 aa15.56■□□□□ 0.08
RDX-218ENST00000544551 ZC3H11AO75152 810 aaKnown RBP eCLIP15.56■□□□□ 0.08
RDX-218ENST00000544551 RARBP10826 455 aa15.56■□□□□ 0.08
RDX-218ENST00000544551 CRADDP78560 199 aa15.56■□□□□ 0.08
RDX-218ENST00000544551 ZNF200P98182 395 aaPredicted RBP15.56■□□□□ 0.08
RDX-218ENST00000544551 C1QBPQ07021 282 aaKnown RBP15.56■□□□□ 0.08
RDX-218ENST00000544551 SCARA3Q6AZY7 606 aa15.56■□□□□ 0.08
RDX-218ENST00000544551 RAPH1Q70E73 1250 aa15.56■□□□□ 0.08
RDX-218ENST00000544551 LRRC6Q86X45 466 aa15.56■□□□□ 0.08
RDX-218ENST00000544551 ARID3BQ8IVW6 561 aaPredicted RBP15.56■□□□□ 0.08
RDX-218ENST00000544551 ATP2A3Q93084 1043 aa15.56■□□□□ 0.08
RDX-218ENST00000544551 TLCD1Q96CP7 247 aa15.56■□□□□ 0.08
RDX-218ENST00000544551 SLITRK1Q96PX8 696 aa15.56■□□□□ 0.08
RDX-218ENST00000544551 AVENQ9NQS1 362 aaPredicted RBP15.56■□□□□ 0.08
RDX-218ENST00000544551 PDGFCQ9NRA1 345 aa15.56■□□□□ 0.08
RDX-218ENST00000544551 NR2E3Q9Y5X4 410 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms