RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 PDGFRBP09619 1106 aa24.84■■□□□ 1.57
CHFR-222ENST00000544093 PPP1R2P41236 205 aa24.84■■□□□ 1.57
CHFR-222ENST00000544093 DLG4P78352 724 aa24.84■■□□□ 1.57
CHFR-222ENST00000544093 SLC44A4Q53GD3 710 aa24.84■■□□□ 1.57
CHFR-222ENST00000544093 GPR158Q5T848 1215 aa24.84■■□□□ 1.57
CHFR-222ENST00000544093 SV2AQ7L0J3 742 aa24.84■■□□□ 1.57
CHFR-222ENST00000544093 MFSD6LQ8IWD5 586 aa24.84■■□□□ 1.57
CHFR-222ENST00000544093 PRSS33Q8NF86 280 aa24.84■■□□□ 1.57
CHFR-222ENST00000544093 MYRFLQ96LU7 910 aa24.84■■□□□ 1.57
CHFR-222ENST00000544093 TSG101Q99816 390 aa24.84■■□□□ 1.57
CHFR-222ENST00000544093 MRPL45Q9BRJ2 306 aaKnown RBP24.84■■□□□ 1.57
CHFR-222ENST00000544093 PLA2G2FQ9BZM2 168 aa24.84■■□□□ 1.57
CHFR-222ENST00000544093 IMPG2Q9BZV3 1241 aa24.84■■□□□ 1.57
CHFR-222ENST00000544093 BRD9Q9H8M2 597 aa24.84■■□□□ 1.57
CHFR-222ENST00000544093 IL21Q9HBE4 155 aa24.84■■□□□ 1.57
CHFR-222ENST00000544093 OBP2AQ9NY56 170 aa24.84■■□□□ 1.57
CHFR-222ENST00000544093 EHD2Q9NZN4 543 aa24.84■■□□□ 1.57
CHFR-222ENST00000544093 PTPRDP23468 1912 aa24.84■■□□□ 1.57
CHFR-222ENST00000544093 CETN3O15182 167 aa24.83■■□□□ 1.57
CHFR-222ENST00000544093 NOL4O94818 638 aa24.83■■□□□ 1.57
CHFR-222ENST00000544093 HMGA1P17096 107 aaKnown RBP24.83■■□□□ 1.57
CHFR-222ENST00000544093 CDR1P51861 262 aa24.83■■□□□ 1.57
CHFR-222ENST00000544093 PSMC1P62191 440 aaKnown RBP24.83■■□□□ 1.57
CHFR-222ENST00000544093 STIM1Q13586 685 aa24.83■■□□□ 1.57
CHFR-222ENST00000544093 VITQ6UXI7 678 aa24.83■■□□□ 1.57
CHFR-222ENST00000544093 SMYD4Q8IYR2 804 aaPredicted RBP24.83■■□□□ 1.57
CHFR-222ENST00000544093 MYLPFQ96A32 169 aa24.83■■□□□ 1.57
CHFR-222ENST00000544093 CRTAC1Q9NQ79 661 aa24.83■■□□□ 1.57
CHFR-222ENST00000544093 CHMP5Q9NZZ3 219 aa24.83■■□□□ 1.57
CHFR-222ENST00000544093 A8MXQ7 604 aa24.82■■□□□ 1.56
CHFR-222ENST00000544093 DPYSL4O14531 572 aa24.82■■□□□ 1.56
CHFR-222ENST00000544093 TRIM66O15016 1216 aa24.82■■□□□ 1.56
CHFR-222ENST00000544093 HCRTO43612 131 aa24.82■■□□□ 1.56
CHFR-222ENST00000544093 ATP2C2O75185 946 aa24.82■■□□□ 1.56
CHFR-222ENST00000544093 VNN1O95497 513 aa24.82■■□□□ 1.56
CHFR-222ENST00000544093 EPB41P11171 864 aaKnown RBP24.82■■□□□ 1.56
CHFR-222ENST00000544093 GTF2H1P32780 548 aa24.82■■□□□ 1.56
CHFR-222ENST00000544093 ANP32AP39687 249 aaKnown RBP24.82■■□□□ 1.56
CHFR-222ENST00000544093 PRCPP42785 496 aa24.82■■□□□ 1.56
CHFR-222ENST00000544093 NLRP12P59046 1061 aa24.82■■□□□ 1.56
CHFR-222ENST00000544093 MCCD1P59942 119 aaPredicted RBP24.82■■□□□ 1.56
CHFR-222ENST00000544093 CYP27A1Q02318 531 aa24.82■■□□□ 1.56
CHFR-222ENST00000544093 DDR2Q16832 855 aa24.82■■□□□ 1.56
CHFR-222ENST00000544093 ARID3BQ8IVW6 561 aaPredicted RBP24.82■■□□□ 1.56
CHFR-222ENST00000544093 YAF2Q8IY57 180 aa24.82■■□□□ 1.56
CHFR-222ENST00000544093 PCED1BQ96HM7 432 aa24.82■■□□□ 1.56
CHFR-222ENST00000544093 TNIP3Q96KP6 325 aa24.82■■□□□ 1.56
CHFR-222ENST00000544093 SPATA17Q96L03 361 aa24.82■■□□□ 1.56
CHFR-222ENST00000544093 DDX23Q9BUQ8 820 aaKnown RBP24.82■■□□□ 1.56
CHFR-222ENST00000544093 SIT1Q9Y3P8 196 aa24.82■■□□□ 1.56
CHFR-222ENST00000544093 CACNA1HO95180 2353 aa24.81■■□□□ 1.56
CHFR-222ENST00000544093 HEPACAM2A8MVW5 462 aa24.81■■□□□ 1.56
CHFR-222ENST00000544093 ZNF263O14978 683 aa24.81■■□□□ 1.56
CHFR-222ENST00000544093 STX10O60499 249 aa24.81■■□□□ 1.56
CHFR-222ENST00000544093 ASS1P00966 412 aaKnown RBP24.81■■□□□ 1.56
CHFR-222ENST00000544093 PTPN1P18031 435 aaKnown RBP24.81■■□□□ 1.56
CHFR-222ENST00000544093 TRIM21P19474 475 aaKnown RBP24.81■■□□□ 1.56
CHFR-222ENST00000544093 ANXA13P27216 316 aa24.81■■□□□ 1.56
CHFR-222ENST00000544093 VIPR2P41587 438 aa24.81■■□□□ 1.56
CHFR-222ENST00000544093 PIK3CAP42336 1068 aa24.81■■□□□ 1.56
CHFR-222ENST00000544093 NHLH1Q02575 133 aa24.81■■□□□ 1.56
CHFR-222ENST00000544093 LRRC63Q05C16 580 aa24.81■■□□□ 1.56
CHFR-222ENST00000544093 STXBP5Q5T5C0 1151 aa24.81■■□□□ 1.56
CHFR-222ENST00000544093 SCN4BQ8IWT1 228 aa24.81■■□□□ 1.56
CHFR-222ENST00000544093 CCDC150Q8NCX0 1101 aa24.81■■□□□ 1.56
CHFR-222ENST00000544093 MRPS31Q92665 395 aaKnown RBP24.81■■□□□ 1.56
CHFR-222ENST00000544093 NELL2Q99435 816 aa24.81■■□□□ 1.56
CHFR-222ENST00000544093 OSBPL6Q9BZF3 934 aa24.81■■□□□ 1.56
CHFR-222ENST00000544093 ELOVL4Q9GZR5 314 aa24.81■■□□□ 1.56
CHFR-222ENST00000544093 MAGED2Q9UNF1 606 aaPredicted RBP24.81■■□□□ 1.56
CHFR-222ENST00000544093 OBSL1O75147 1896 aa24.81■■□□□ 1.56
CHFR-222ENST00000544093 KANSL1LA0AUZ9 987 aa24.8■■□□□ 1.56
CHFR-222ENST00000544093 SLC38A8A6NNN8 435 aa24.8■■□□□ 1.56
CHFR-222ENST00000544093 F11P03951 625 aa24.8■■□□□ 1.56
CHFR-222ENST00000544093 GDI1P31150 447 aa24.8■■□□□ 1.56
CHFR-222ENST00000544093 GRIK1P39086 918 aa24.8■■□□□ 1.56
CHFR-222ENST00000544093 GPR15P49685 360 aa24.8■■□□□ 1.56
CHFR-222ENST00000544093 FKBP3Q00688 224 aaKnown RBP24.8■■□□□ 1.56
CHFR-222ENST00000544093 FCHO2Q0JRZ9 810 aa24.8■■□□□ 1.56
CHFR-222ENST00000544093 TCF15Q12870 199 aa24.8■■□□□ 1.56
CHFR-222ENST00000544093 GRM2Q14416 872 aa24.8■■□□□ 1.56
CHFR-222ENST00000544093 MDH1BQ5I0G3 518 aa24.8■■□□□ 1.56
CHFR-222ENST00000544093 C1orf220Q5T0J3 134 aa24.8■■□□□ 1.56
CHFR-222ENST00000544093 CCDC105Q8IYK2 499 aa24.8■■□□□ 1.56
CHFR-222ENST00000544093 B3GALNT2Q8NCR0 500 aa24.8■■□□□ 1.56
CHFR-222ENST00000544093 PJA1Q8NG27 643 aa24.8■■□□□ 1.56
CHFR-222ENST00000544093 SMYD3Q9H7B4 428 aa24.8■■□□□ 1.56
CHFR-222ENST00000544093 TMEM8AQ9HCN3 771 aa24.8■■□□□ 1.56
CHFR-222ENST00000544093 MRPS17Q9Y2R5 130 aaKnown RBP24.8■■□□□ 1.56
CHFR-222ENST00000544093 GREB1Q4ZG55 1949 aa24.79■■□□□ 1.56
CHFR-222ENST00000544093 MIA3Q5JRA6 1907 aa24.79■■□□□ 1.56
CHFR-222ENST00000544093 PSMA7O14818 248 aa24.79■■□□□ 1.56
CHFR-222ENST00000544093 CHADO15335 359 aa24.79■■□□□ 1.56
CHFR-222ENST00000544093 SLC16A3O15427 465 aaKnown RBP24.79■■□□□ 1.56
CHFR-222ENST00000544093 PI15O43692 258 aa24.79■■□□□ 1.56
CHFR-222ENST00000544093 HLA-DRAP01903 254 aa24.79■■□□□ 1.56
CHFR-222ENST00000544093 GLULP15104 373 aa24.79■■□□□ 1.56
CHFR-222ENST00000544093 BDNFP23560 247 aa24.79■■□□□ 1.56
CHFR-222ENST00000544093 AVPR1AP37288 418 aa24.79■■□□□ 1.56
CHFR-222ENST00000544093 MLLT6P55198 1093 aaPredicted RBP24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms