RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 NTHL1P78549 312 aa16.07■□□□□ 0.16
CD9-210ENST00000543916 KCNMA1Q12791 1236 aa16.07■□□□□ 0.16
CD9-210ENST00000543916 ZNF394Q53GI3 561 aa16.07■□□□□ 0.16
CD9-210ENST00000543916 ATAT1Q5SQI0 421 aa16.07■□□□□ 0.16
CD9-210ENST00000543916 GJB7Q6PEY0 223 aa16.07■□□□□ 0.16
CD9-210ENST00000543916 LRSAM1Q6UWE0 723 aa16.07■□□□□ 0.16
CD9-210ENST00000543916 C4orf50Q6ZRC1 276 aa16.07■□□□□ 0.16
CD9-210ENST00000543916 GRASPQ7Z6J2 395 aaPredicted RBP16.07■□□□□ 0.16
CD9-210ENST00000543916 C12orf29Q8N999 325 aa16.07■□□□□ 0.16
CD9-210ENST00000543916 FUBP3Q96I24 572 aaKnown RBP eCLIP16.07■□□□□ 0.16
CD9-210ENST00000543916 KREMEN1Q96MU8 473 aa16.07■□□□□ 0.16
CD9-210ENST00000543916 NT5C1AQ9BXI3 368 aa16.07■□□□□ 0.16
CD9-210ENST00000543916 PIDD1Q9HB75 910 aa16.07■□□□□ 0.16
CD9-210ENST00000543916 DNMT3BQ9UBC3 853 aaKnown RBP16.07■□□□□ 0.16
CD9-210ENST00000543916 PATJQ8NI35 1801 aa16.07■□□□□ 0.16
CD9-210ENST00000543916 GREB1Q4ZG55 1949 aa16.07■□□□□ 0.16
CD9-210ENST00000543916 DOCK6Q96HP0 2047 aa16.07■□□□□ 0.16
CD9-210ENST00000543916 CLUHO75153 1309 aa16.06■□□□□ 0.16
CD9-210ENST00000543916 LRRC10BA6NIK2 292 aa16.06■□□□□ 0.16
CD9-210ENST00000543916 CCDC130P13994 396 aa16.06■□□□□ 0.16
CD9-210ENST00000543916 CDK11BP21127 795 aaKnown RBP16.06■□□□□ 0.16
CD9-210ENST00000543916 ACO1P21399 889 aaKnown RBP16.06■□□□□ 0.16
CD9-210ENST00000543916 BDNFP23560 247 aa16.06■□□□□ 0.16
CD9-210ENST00000543916 ALDH1A3P47895 512 aa16.06■□□□□ 0.16
CD9-210ENST00000543916 TUFMP49411 452 aaKnown RBP16.06■□□□□ 0.16
CD9-210ENST00000543916 CACNA2D1P54289 1103 aa16.06■□□□□ 0.16
CD9-210ENST00000543916 RAD23BP54727 409 aa16.06■□□□□ 0.16
CD9-210ENST00000543916 GCNT1Q02742 428 aa16.06■□□□□ 0.16
CD9-210ENST00000543916 DPY19L2P1Q6NXN4 242 aa16.06■□□□□ 0.16
CD9-210ENST00000543916 PAQR9Q6ZVX9 377 aa16.06■□□□□ 0.16
CD9-210ENST00000543916 TTC39CQ8N584 583 aa16.06■□□□□ 0.16
CD9-210ENST00000543916 SLC4A11Q8NBS3 891 aa16.06■□□□□ 0.16
CD9-210ENST00000543916 STKLD1Q8NE28 680 aa16.06■□□□□ 0.16
CD9-210ENST00000543916 ANKRD20A12PQ8NF67 263 aa16.06■□□□□ 0.16
CD9-210ENST00000543916 GPR152Q8TDT2 470 aa16.06■□□□□ 0.16
CD9-210ENST00000543916 NECTIN4Q96NY8 510 aa16.06■□□□□ 0.16
CD9-210ENST00000543916 ZNF518BQ9C0D4 1074 aa16.06■□□□□ 0.16
CD9-210ENST00000543916 FAM124BQ9H5Z6 455 aaPredicted RBP16.06■□□□□ 0.16
CD9-210ENST00000543916 FAM49BQ9NUQ9 324 aa16.06■□□□□ 0.16
CD9-210ENST00000543916 TMEM30AQ9NV96 361 aa16.06■□□□□ 0.16
CD9-210ENST00000543916 AJAP1Q9UKB5 411 aaPredicted RBP16.06■□□□□ 0.16
CD9-210ENST00000543916 FAM50BQ9Y247 325 aa16.06■□□□□ 0.16
CD9-210ENST00000543916 OBSL1O75147 1896 aa16.05■□□□□ 0.16
CD9-210ENST00000543916 LGALS16A8MUM7 142 aa16.05■□□□□ 0.16
CD9-210ENST00000543916 CAVIN2O95810 425 aa16.05■□□□□ 0.16
CD9-210ENST00000543916 TPM2P07951 284 aa16.05■□□□□ 0.16
CD9-210ENST00000543916 MAGEA11P43364 429 aa16.05■□□□□ 0.16
CD9-210ENST00000543916 EPHB3P54753 998 aa16.05■□□□□ 0.16
CD9-210ENST00000543916 YWHAEP62258 255 aaKnown RBP16.05■□□□□ 0.16
CD9-210ENST00000543916 PLD1Q13393 1074 aa16.05■□□□□ 0.16
CD9-210ENST00000543916 DDR2Q16832 855 aa16.05■□□□□ 0.16
CD9-210ENST00000543916 TJAP1Q5JTD0 557 aa16.05■□□□□ 0.16
CD9-210ENST00000543916 SDHAF4Q5VUM1 108 aa16.05■□□□□ 0.16
CD9-210ENST00000543916 FAM35AQ86V20 835 aa16.05■□□□□ 0.16
CD9-210ENST00000543916 HS6ST3Q8IZP7 471 aa16.05■□□□□ 0.16
CD9-210ENST00000543916 FUKQ8N0W3 1084 aa16.05■□□□□ 0.16
CD9-210ENST00000543916 FAM200AQ8TCP9 573 aa16.05■□□□□ 0.16
CD9-210ENST00000543916 GIPC2Q8TF65 315 aa16.05■□□□□ 0.16
CD9-210ENST00000543916 TMEM176AQ96HP8 235 aa16.05■□□□□ 0.16
CD9-210ENST00000543916 CORO1BQ9BR76 489 aa16.05■□□□□ 0.16
CD9-210ENST00000543916 TSPY26PQ9H489 355 aa16.05■□□□□ 0.16
CD9-210ENST00000543916 WDR6Q9NNW5 1121 aaKnown RBP16.05■□□□□ 0.16
CD9-210ENST00000543916 UBE2TQ9NPD8 197 aaPredicted RBP16.05■□□□□ 0.16
CD9-210ENST00000543916 APEX2Q9UBZ4 518 aa16.05■□□□□ 0.16
CD9-210ENST00000543916 RNF225M0QZC1 329 aaPredicted RBP16.04■□□□□ 0.16
CD9-210ENST00000543916 RHOP08100 348 aa16.04■□□□□ 0.16
CD9-210ENST00000543916 PTPN2P17706 415 aa16.04■□□□□ 0.16
CD9-210ENST00000543916 VSTM1Q6UX27 236 aa16.04■□□□□ 0.16
CD9-210ENST00000543916 SCN4BQ8IWT1 228 aa16.04■□□□□ 0.16
CD9-210ENST00000543916 ELMOD1Q8N336 334 aa16.04■□□□□ 0.16
CD9-210ENST00000543916 SLC2A14Q8TDB8 520 aa16.04■□□□□ 0.16
CD9-210ENST00000543916 ZNF512Q96ME7 567 aaPredicted RBP16.04■□□□□ 0.16
CD9-210ENST00000543916 MED10Q9BTT4 135 aa16.04■□□□□ 0.16
CD9-210ENST00000543916 PHF7Q9BWX1 381 aaPredicted RBP16.04■□□□□ 0.16
CD9-210ENST00000543916 LSM14BQ9BX40 385 aaKnown RBP16.04■□□□□ 0.16
CD9-210ENST00000543916 LRRC3Q9BY71 257 aa16.04■□□□□ 0.16
CD9-210ENST00000543916 PCDHB4Q9Y5E5 795 aa16.04■□□□□ 0.16
CD9-210ENST00000543916 ATP8B3O60423 1300 aa16.03■□□□□ 0.16
CD9-210ENST00000543916 NRG2O14511 850 aaPredicted RBP16.03■□□□□ 0.16
CD9-210ENST00000543916 SP100P23497 879 aaPredicted RBP16.03■□□□□ 0.16
CD9-210ENST00000543916 ADORA2BP29275 332 aa16.03■□□□□ 0.16
CD9-210ENST00000543916 KLK7P49862 253 aa16.03■□□□□ 0.16
CD9-210ENST00000543916 MFAP3P55082 362 aa16.03■□□□□ 0.16
CD9-210ENST00000543916 ZNF445P59923 1031 aa16.03■□□□□ 0.16
CD9-210ENST00000543916 RPL10AP62906 217 aaKnown RBP16.03■□□□□ 0.16
CD9-210ENST00000543916 SLC5A9Q2M3M2 681 aa16.03■□□□□ 0.16
CD9-210ENST00000543916 PABPC1LQ4VXU2 614 aaKnown RBP16.03■□□□□ 0.16
CD9-210ENST00000543916 PPP1R26Q5T8A7 1209 aaPredicted RBP16.03■□□□□ 0.16
CD9-210ENST00000543916 TMEM270Q6UE05 265 aa16.03■□□□□ 0.16
CD9-210ENST00000543916 TMC8Q8IU68 726 aa16.03■□□□□ 0.16
CD9-210ENST00000543916 RBBP8NLQ8NC74 664 aaPredicted RBP16.03■□□□□ 0.16
CD9-210ENST00000543916 PSMG2Q969U7 264 aa16.03■□□□□ 0.16
CD9-210ENST00000543916 CYFIP2Q96F07 1278 aa16.03■□□□□ 0.16
CD9-210ENST00000543916 HEXIM2Q96MH2 286 aaKnown RBP16.03■□□□□ 0.16
CD9-210ENST00000543916 ZNF334Q9HCZ1 680 aaPredicted RBP16.03■□□□□ 0.16
CD9-210ENST00000543916 ASB3Q9Y575 518 aa16.03■□□□□ 0.16
CD9-210ENST00000543916 MYH10P35580 1976 aa16.03■□□□□ 0.16
CD9-210ENST00000543916 DENND4CQ5VZ89 1909 aa16.02■□□□□ 0.16
CD9-210ENST00000543916 F8VP50 259 aa16.02■□□□□ 0.16
CD9-210ENST00000543916 AP1G2O75843 785 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms