RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 CPA6Q8N4T0 437 aa24.3■■□□□ 1.48
CDKN3-207ENST00000543789 LRRC52Q8N7C0 313 aa24.3■■□□□ 1.48
CDKN3-207ENST00000543789 ZSWIM2Q8NEG5 633 aa24.3■■□□□ 1.48
CDKN3-207ENST00000543789 SAAL1Q96ER3 474 aa24.3■■□□□ 1.48
CDKN3-207ENST00000543789 TRMT2BQ96GJ1 504 aaKnown RBP24.3■■□□□ 1.48
CDKN3-207ENST00000543789 ECT2Q9H8V3 914 aa24.3■■□□□ 1.48
CDKN3-207ENST00000543789 POLR3BQ9NW08 1133 aaPredicted RBP24.3■■□□□ 1.48
CDKN3-207ENST00000543789 GTF3C4Q9UKN8 822 aa24.3■■□□□ 1.48
CDKN3-207ENST00000543789 GCNT3O95395 438 aa24.29■■□□□ 1.48
CDKN3-207ENST00000543789 MTF1Q14872 753 aa24.29■■□□□ 1.48
CDKN3-207ENST00000543789 SYCP3Q8IZU3 236 aa24.29■■□□□ 1.48
CDKN3-207ENST00000543789 OSCP1Q8WVF1 389 aa24.29■■□□□ 1.48
CDKN3-207ENST00000543789 DNAJC19Q96DA6 116 aa24.29■■□□□ 1.48
CDKN3-207ENST00000543789 CHAMP1Q96JM3 812 aa24.29■■□□□ 1.48
CDKN3-207ENST00000543789 ZC3H10Q96K80 434 aaKnown RBP24.29■■□□□ 1.48
CDKN3-207ENST00000543789 PKMYT1Q99640 499 aa24.29■■□□□ 1.48
CDKN3-207ENST00000543789 TRPC7Q9HCX4 862 aa24.29■■□□□ 1.48
CDKN3-207ENST00000543789 DUS2Q9NX74 493 aaKnown RBP24.29■■□□□ 1.48
CDKN3-207ENST00000543789 GDAP2Q9NXN4 497 aa24.29■■□□□ 1.48
CDKN3-207ENST00000543789 RBAKQ9NYW8 714 aaPredicted RBP24.29■■□□□ 1.48
CDKN3-207ENST00000543789 ITGA11Q9UKX5 1188 aa24.29■■□□□ 1.48
CDKN3-207ENST00000543789 PCDHGA5Q9Y5G8 931 aa24.29■■□□□ 1.48
CDKN3-207ENST00000543789 SNX9Q9Y5X1 595 aa24.29■■□□□ 1.48
CDKN3-207ENST00000543789 CLIC4Q9Y696 253 aa24.29■■□□□ 1.48
CDKN3-207ENST00000543789 TRAV19A0A0A6YYK7 116 aa24.28■■□□□ 1.48
CDKN3-207ENST00000543789 TM4SF5O14894 197 aa24.28■■□□□ 1.48
CDKN3-207ENST00000543789 TADA3O75528 432 aa24.28■■□□□ 1.48
CDKN3-207ENST00000543789 KRT19P08727 400 aa24.28■■□□□ 1.48
CDKN3-207ENST00000543789 USP17L7P0C7H9 530 aa24.28■■□□□ 1.48
CDKN3-207ENST00000543789 GARTP22102 1010 aa24.28■■□□□ 1.48
CDKN3-207ENST00000543789 LHX1P48742 406 aa24.28■■□□□ 1.48
CDKN3-207ENST00000543789 RBP5P82980 135 aa24.28■■□□□ 1.48
CDKN3-207ENST00000543789 PLA2G2CQ5R387 149 aa24.28■■□□□ 1.48
CDKN3-207ENST00000543789 SPATA2LQ8IUW3 424 aaPredicted RBP24.28■■□□□ 1.48
CDKN3-207ENST00000543789 CXorf38Q8TB03 319 aa24.28■■□□□ 1.48
CDKN3-207ENST00000543789 SPATA18Q8TC71 538 aa24.28■■□□□ 1.48
CDKN3-207ENST00000543789 HHIPQ96QV1 700 aa24.28■■□□□ 1.48
CDKN3-207ENST00000543789 CYP2S1Q96SQ9 504 aa24.28■■□□□ 1.48
CDKN3-207ENST00000543789 RXFP3Q9NSD7 469 aa24.28■■□□□ 1.48
CDKN3-207ENST00000543789 SRPRBQ9Y5M8 271 aaKnown RBP24.28■■□□□ 1.48
CDKN3-207ENST00000543789 NUP210Q8TEM1 1887 aaPredicted RBP24.28■■□□□ 1.48
CDKN3-207ENST00000543789 SCN1AP35498 2009 aa24.27■■□□□ 1.48
CDKN3-207ENST00000543789 ZNF77Q15935 545 aa24.27■■□□□ 1.48
CDKN3-207ENST00000543789 ST3GAL2Q16842 350 aa24.27■■□□□ 1.48
CDKN3-207ENST00000543789 CFAP221Q4G0U5 840 aa24.27■■□□□ 1.48
CDKN3-207ENST00000543789 NAIF1Q69YI7 327 aaPredicted RBP24.27■■□□□ 1.48
CDKN3-207ENST00000543789 SCARA3Q6AZY7 606 aa24.27■■□□□ 1.48
CDKN3-207ENST00000543789 SYT13Q7L8C5 426 aa24.27■■□□□ 1.48
CDKN3-207ENST00000543789 OSTM1Q86WC4 334 aa24.27■■□□□ 1.48
CDKN3-207ENST00000543789 TOP6BLQ8N6T0 577 aa24.27■■□□□ 1.48
CDKN3-207ENST00000543789 FSIP1Q8NA03 581 aa24.27■■□□□ 1.48
CDKN3-207ENST00000543789 TTC16Q8NEE8 873 aa24.27■■□□□ 1.48
CDKN3-207ENST00000543789 CD101Q93033 1021 aa24.27■■□□□ 1.48
CDKN3-207ENST00000543789 SLC22A12Q96S37 553 aa24.27■■□□□ 1.48
CDKN3-207ENST00000543789 TMEM206Q9H813 350 aa24.27■■□□□ 1.48
CDKN3-207ENST00000543789 FBXO2Q9UK22 296 aaPredicted RBP24.27■■□□□ 1.48
CDKN3-207ENST00000543789 GOLGA8IPA6NC78 632 aa24.26■■□□□ 1.47
CDKN3-207ENST00000543789 GOLGA8JA6NMD2 632 aa24.26■■□□□ 1.47
CDKN3-207ENST00000543789 GABRDO14764 452 aa24.26■■□□□ 1.47
CDKN3-207ENST00000543789 CKMP06732 381 aa24.26■■□□□ 1.47
CDKN3-207ENST00000543789 PCSK1P29120 753 aa24.26■■□□□ 1.47
CDKN3-207ENST00000543789 TXLNAP40222 546 aa24.26■■□□□ 1.47
CDKN3-207ENST00000543789 IFNAR2P48551 515 aa24.26■■□□□ 1.47
CDKN3-207ENST00000543789 PLK5Q496M5 336 aa24.26■■□□□ 1.47
CDKN3-207ENST00000543789 STPG1Q5TH74 334 aa24.26■■□□□ 1.47
CDKN3-207ENST00000543789 SCN4BQ8IWT1 228 aa24.26■■□□□ 1.47
CDKN3-207ENST00000543789 ADGRF2Q8IZF7 708 aa24.26■■□□□ 1.47
CDKN3-207ENST00000543789 RPLP0P6Q8NHW5 317 aa24.26■■□□□ 1.47
CDKN3-207ENST00000543789 ATP2A3Q93084 1043 aa24.26■■□□□ 1.47
CDKN3-207ENST00000543789 FUBP3Q96I24 572 aaKnown RBP eCLIP24.26■■□□□ 1.47
CDKN3-207ENST00000543789 OLFML3Q9NRN5 406 aa24.26■■□□□ 1.47
CDKN3-207ENST00000543789 TSC2P49815 1807 aa24.26■■□□□ 1.47
CDKN3-207ENST00000543789 VPS37CA5D8V6 355 aaPredicted RBP24.25■■□□□ 1.47
CDKN3-207ENST00000543789 IDEP14735 1019 aa24.25■■□□□ 1.47
CDKN3-207ENST00000543789 MPLP40238 635 aa24.25■■□□□ 1.47
CDKN3-207ENST00000543789 CASP5P51878 434 aa24.25■■□□□ 1.47
CDKN3-207ENST00000543789 NR1H3Q13133 447 aa24.25■■□□□ 1.47
CDKN3-207ENST00000543789 ALCAMQ13740 583 aa24.25■■□□□ 1.47
CDKN3-207ENST00000543789 ARL14EPQ8N8R7 260 aaPredicted RBP24.25■■□□□ 1.47
CDKN3-207ENST00000543789 NOC3LQ8WTT2 800 aaKnown RBP24.25■■□□□ 1.47
CDKN3-207ENST00000543789 FAM84AQ96KN4 292 aa24.25■■□□□ 1.47
CDKN3-207ENST00000543789 CLIC6Q96NY7 704 aa24.25■■□□□ 1.47
CDKN3-207ENST00000543789 CBWD1Q9BRT8 395 aa24.25■■□□□ 1.47
CDKN3-207ENST00000543789 PCIF1Q9H4Z3 704 aa24.25■■□□□ 1.47
CDKN3-207ENST00000543789 UPF2Q9HAU5 1272 aaKnown RBP24.25■■□□□ 1.47
CDKN3-207ENST00000543789 PDE11AQ9HCR9 933 aa24.25■■□□□ 1.47
CDKN3-207ENST00000543789 VPS45Q9NRW7 570 aa24.25■■□□□ 1.47
CDKN3-207ENST00000543789 GCNT4Q9P109 453 aa24.25■■□□□ 1.47
CDKN3-207ENST00000543789 EBF1Q9UH73 591 aa24.25■■□□□ 1.47
CDKN3-207ENST00000543789 SIX4Q9UIU6 781 aa24.25■■□□□ 1.47
CDKN3-207ENST00000543789 R3HCC1Q9Y3T6 440 aaKnown RBP24.25■■□□□ 1.47
CDKN3-207ENST00000543789 WNT6Q9Y6F9 365 aa24.25■■□□□ 1.47
CDKN3-207ENST00000543789 APBB3O95704 486 aa24.24■■□□□ 1.47
CDKN3-207ENST00000543789 PSMD2Q13200 908 aa24.24■■□□□ 1.47
CDKN3-207ENST00000543789 CCDC142Q17RM4 750 aa24.24■■□□□ 1.47
CDKN3-207ENST00000543789 SOWAHAQ2M3V2 549 aa24.24■■□□□ 1.47
CDKN3-207ENST00000543789 EML3Q32P44 896 aa24.24■■□□□ 1.47
CDKN3-207ENST00000543789 N4BP2L1Q5TBK1 243 aaPredicted RBP24.24■■□□□ 1.47
CDKN3-207ENST00000543789 FAM171BQ6P995 826 aa24.24■■□□□ 1.47
CDKN3-207ENST00000543789 DPH6Q7L8W6 267 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms