RNA–Protein interactions for RNA: ENST00000543768.1

SCNN1A-221, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCNN1A, Length 2,361 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-221ENST00000543768 FOXO6A8MYZ6 492 aa16.94■□□□□ 0.3
SCNN1A-221ENST00000543768 MICAL2O94851 1124 aa16.94■□□□□ 0.3
SCNN1A-221ENST00000543768 ITGAVP06756 1048 aa16.94■□□□□ 0.3
SCNN1A-221ENST00000543768 MAGEA4P43358 317 aa16.94■□□□□ 0.3
SCNN1A-221ENST00000543768 ZNF268Q14587 947 aaPredicted RBP16.94■□□□□ 0.3
SCNN1A-221ENST00000543768 SMTNL2Q2TAL5 461 aa16.94■□□□□ 0.3
SCNN1A-221ENST00000543768 VSTM1Q6UX27 236 aa16.94■□□□□ 0.3
SCNN1A-221ENST00000543768 CYP4X1Q8N118 509 aa16.94■□□□□ 0.3
SCNN1A-221ENST00000543768 SLC35B2Q8TB61 432 aa16.94■□□□□ 0.3
SCNN1A-221ENST00000543768 EMID1Q96A84 441 aaPredicted RBP16.94■□□□□ 0.3
SCNN1A-221ENST00000543768 CABS1Q96KC9 395 aa16.94■□□□□ 0.3
SCNN1A-221ENST00000543768 ZWILCHQ9H900 591 aa16.94■□□□□ 0.3
SCNN1A-221ENST00000543768 CYP3A43Q9HB55 503 aa16.94■□□□□ 0.3
SCNN1A-221ENST00000543768 VTA1Q9NP79 307 aa16.94■□□□□ 0.3
SCNN1A-221ENST00000543768 METTL5Q9NRN9 209 aaKnown RBP16.94■□□□□ 0.3
SCNN1A-221ENST00000543768 WDR35Q9P2L0 1181 aa16.94■□□□□ 0.3
SCNN1A-221ENST00000543768 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.94■□□□□ 0.3
SCNN1A-221ENST00000543768 EFR3BQ9Y2G0 817 aa16.94■□□□□ 0.3
SCNN1A-221ENST00000543768 CITO14578 2027 aa16.93■□□□□ 0.3
SCNN1A-221ENST00000543768 YBX3P16989 372 aaKnown RBP eCLIP16.93■□□□□ 0.3
SCNN1A-221ENST00000543768 HNRNPH1P31943 449 aaKnown RBP16.93■□□□□ 0.3
SCNN1A-221ENST00000543768 ADCYAP1R1P41586 468 aa16.93■□□□□ 0.3
SCNN1A-221ENST00000543768 GABRB2P47870 512 aa16.93■□□□□ 0.3
SCNN1A-221ENST00000543768 GPS1Q13098 491 aa16.93■□□□□ 0.3
SCNN1A-221ENST00000543768 TAZQ16635 292 aa16.93■□□□□ 0.3
SCNN1A-221ENST00000543768 CCDC142Q17RM4 750 aa16.93■□□□□ 0.3
SCNN1A-221ENST00000543768 KCNT1Q5JUK3 1230 aa16.93■□□□□ 0.3
SCNN1A-221ENST00000543768 RNF187Q5TA31 235 aaPredicted RBP16.93■□□□□ 0.3
SCNN1A-221ENST00000543768 MTHFD1LQ6UB35 978 aa16.93■□□□□ 0.3
SCNN1A-221ENST00000543768 TMEM121Q9BTD3 319 aa16.93■□□□□ 0.3
SCNN1A-221ENST00000543768 CXorf56Q9H5V9 222 aa16.93■□□□□ 0.3
SCNN1A-221ENST00000543768 EURLQ9NYK6 297 aa16.93■□□□□ 0.3
SCNN1A-221ENST00000543768 LGALS13Q9UHV8 139 aa16.93■□□□□ 0.3
SCNN1A-221ENST00000543768 PNMA3Q9UL41 463 aa16.93■□□□□ 0.3
SCNN1A-221ENST00000543768 TPX2Q9ULW0 747 aaKnown RBP16.93■□□□□ 0.3
SCNN1A-221ENST00000543768 COL1A2P08123 1366 aa16.93■□□□□ 0.3
SCNN1A-221ENST00000543768 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.93■□□□□ 0.3
SCNN1A-221ENST00000543768 FSBPO95073 299 aa16.93■□□□□ 0.3
SCNN1A-221ENST00000543768 ATP5DP30049 168 aa16.93■□□□□ 0.3
SCNN1A-221ENST00000543768 GPD2P43304 727 aa16.93■□□□□ 0.3
SCNN1A-221ENST00000543768 PSMC4P43686 418 aa16.93■□□□□ 0.3
SCNN1A-221ENST00000543768 LRRC34Q8IZ02 419 aa16.93■□□□□ 0.3
SCNN1A-221ENST00000543768 MCRS1Q96EZ8 462 aa16.93■□□□□ 0.3
SCNN1A-221ENST00000543768 HPDLQ96IR7 371 aa16.93■□□□□ 0.3
SCNN1A-221ENST00000543768 OSBPL7Q9BZF2 842 aa16.93■□□□□ 0.3
SCNN1A-221ENST00000543768 SPON1Q9HCB6 807 aa16.93■□□□□ 0.3
SCNN1A-221ENST00000543768 SAE1Q9UBE0 346 aaPredicted RBP16.93■□□□□ 0.3
SCNN1A-221ENST00000543768 AGAP1Q9UPQ3 857 aa16.93■□□□□ 0.3
SCNN1A-221ENST00000543768 NAALADL1Q9UQQ1 740 aa16.93■□□□□ 0.3
SCNN1A-221ENST00000543768 TRIP11Q15643 1979 aa16.93■□□□□ 0.3
SCNN1A-221ENST00000543768 TMEM120BA0PK00 339 aa16.92■□□□□ 0.3
SCNN1A-221ENST00000543768 KRT7P08729 469 aa16.92■□□□□ 0.3
SCNN1A-221ENST00000543768 KDELR1P24390 212 aa16.92■□□□□ 0.3
SCNN1A-221ENST00000543768 MNAT1P51948 309 aa16.92■□□□□ 0.3
SCNN1A-221ENST00000543768 STAT4Q14765 748 aa16.92■□□□□ 0.3
SCNN1A-221ENST00000543768 TMEM132DQ14C87 1099 aa16.92■□□□□ 0.3
SCNN1A-221ENST00000543768 MAP1SQ66K74 1059 aaPredicted RBP16.92■□□□□ 0.3
SCNN1A-221ENST00000543768 DPY19L2Q6NUT2 758 aa16.92■□□□□ 0.3
SCNN1A-221ENST00000543768 PIGWQ7Z7B1 504 aa16.92■□□□□ 0.3
SCNN1A-221ENST00000543768 GTF3C2Q8WUA4 911 aaPredicted RBP16.92■□□□□ 0.3
SCNN1A-221ENST00000543768 SLC10A4Q96EP9 437 aa16.92■□□□□ 0.3
SCNN1A-221ENST00000543768 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.92■□□□□ 0.3
SCNN1A-221ENST00000543768 TSPAN1O60635 241 aa16.92■□□□□ 0.3
SCNN1A-221ENST00000543768 SNAI1O95863 264 aaPredicted RBP16.92■□□□□ 0.3
SCNN1A-221ENST00000543768 ABHD2P08910 425 aa16.92■□□□□ 0.3
SCNN1A-221ENST00000543768 PECAM1P16284 738 aaPredicted RBP16.92■□□□□ 0.3
SCNN1A-221ENST00000543768 IFNAR2P48551 515 aa16.92■□□□□ 0.3
SCNN1A-221ENST00000543768 CCNA1P78396 465 aa16.92■□□□□ 0.3
SCNN1A-221ENST00000543768 HADHQ16836 314 aaKnown RBP16.92■□□□□ 0.3
SCNN1A-221ENST00000543768 RNASEH2BQ5TBB1 312 aaKnown RBP16.92■□□□□ 0.3
SCNN1A-221ENST00000543768 CEP128Q6ZU80 1094 aa16.92■□□□□ 0.3
SCNN1A-221ENST00000543768 SYNCQ9H7C4 482 aa16.92■□□□□ 0.3
SCNN1A-221ENST00000543768 PCDH9Q9HC56 1237 aa16.92■□□□□ 0.3
SCNN1A-221ENST00000543768 SAYSD1Q9NPB0 183 aa16.92■□□□□ 0.3
SCNN1A-221ENST00000543768 KAT6AQ92794 2004 aa16.91■□□□□ 0.3
SCNN1A-221ENST00000543768 H3BRB1 525 aa16.91■□□□□ 0.3
SCNN1A-221ENST00000543768 M0QYV0 167 aa16.91■□□□□ 0.3
SCNN1A-221ENST00000543768 CDH16O75309 829 aa16.91■□□□□ 0.3
SCNN1A-221ENST00000543768 HMGCRP04035 888 aa16.91■□□□□ 0.3
SCNN1A-221ENST00000543768 CD48P09326 243 aa16.91■□□□□ 0.3
SCNN1A-221ENST00000543768 VDRP11473 427 aa16.91■□□□□ 0.3
SCNN1A-221ENST00000543768 MAP2K2P36507 400 aa16.91■□□□□ 0.3
SCNN1A-221ENST00000543768 OTUD4Q01804 1114 aaKnown RBP16.91■□□□□ 0.3
SCNN1A-221ENST00000543768 PLCB3Q01970 1234 aa16.91■□□□□ 0.3
SCNN1A-221ENST00000543768 INCA1Q0VD86 236 aa16.91■□□□□ 0.3
SCNN1A-221ENST00000543768 MPP2Q14168 576 aa16.91■□□□□ 0.3
SCNN1A-221ENST00000543768 MORF4L2Q15014 288 aa16.91■□□□□ 0.3
SCNN1A-221ENST00000543768 KYAT1Q16773 422 aa16.91■□□□□ 0.3
SCNN1A-221ENST00000543768 MARCH8Q5T0T0 291 aa16.91■□□□□ 0.3
SCNN1A-221ENST00000543768 CYP4F22Q6NT55 531 aa16.91■□□□□ 0.3
SCNN1A-221ENST00000543768 ACTL9Q8TC94 416 aa16.91■□□□□ 0.3
SCNN1A-221ENST00000543768 NLRP7Q8WX94 980 aa16.91■□□□□ 0.3
SCNN1A-221ENST00000543768 HEXIM2Q96MH2 286 aaKnown RBP16.91■□□□□ 0.3
SCNN1A-221ENST00000543768 TUT1Q9H6E5 874 aaKnown RBP16.91■□□□□ 0.3
SCNN1A-221ENST00000543768 TBK1Q9UHD2 729 aa16.91■□□□□ 0.3
SCNN1A-221ENST00000543768 C2CD2Q9Y426 696 aa16.91■□□□□ 0.3
SCNN1A-221ENST00000543768 A0A1B0GUA9 196 aa16.91■□□□□ 0.3
SCNN1A-221ENST00000543768 SGK1O00141 431 aa16.91■□□□□ 0.3
SCNN1A-221ENST00000543768 CST8O60676 142 aa16.91■□□□□ 0.3
SCNN1A-221ENST00000543768 P4HA1P13674 534 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms