RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, human

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDB1-222	ENST00000543627	CBWD6	Q4V339	395 aa		11.78	□□□□□ -0.52
DDB1-222	ENST00000543627	ARHGAP15	Q53QZ3	475 aa		11.78	□□□□□ -0.52
DDB1-222	ENST00000543627	CBWD3	Q5JTY5	395 aa		11.78	□□□□□ -0.52
DDB1-222	ENST00000543627	PRSS36	Q5K4E3	855 aa		11.78	□□□□□ -0.52
DDB1-222	ENST00000543627	CBWD5	Q5RIA9	395 aa		11.78	□□□□□ -0.52
DDB1-222	ENST00000543627	STXBP5	Q5T5C0	1151 aa		11.78	□□□□□ -0.52
DDB1-222	ENST00000543627	TTI2	Q6NXR4	508 aa		11.78	□□□□□ -0.52
DDB1-222	ENST00000543627	FAM171B	Q6P995	826 aa		11.78	□□□□□ -0.52
DDB1-222	ENST00000543627	MTSS1L	Q765P7	747 aa		11.78	□□□□□ -0.52
DDB1-222	ENST00000543627	UBALD2	Q8IYN6	164 aa		11.78	□□□□□ -0.52
DDB1-222	ENST00000543627	LEMD2	Q8NC56	503 aa		11.78	□□□□□ -0.52
DDB1-222	ENST00000543627	B3GALNT2	Q8NCR0	500 aa		11.78	□□□□□ -0.52
DDB1-222	ENST00000543627	FBXL13	Q8NEE6	735 aa		11.78	□□□□□ -0.52
DDB1-222	ENST00000543627	SHKBP1	Q8TBC3	707 aa		11.78	□□□□□ -0.52
DDB1-222	ENST00000543627	MYCBPAP	Q8TBZ2	947 aa		11.78	□□□□□ -0.52
DDB1-222	ENST00000543627	SPATA18	Q8TC71	538 aa		11.78	□□□□□ -0.52
DDB1-222	ENST00000543627	GPT2	Q8TD30	523 aa		11.78	□□□□□ -0.52
DDB1-222	ENST00000543627	TAF4B	Q92750	862 aa		11.78	□□□□□ -0.52
DDB1-222	ENST00000543627	SEMA4D	Q92854	862 aa		11.78	□□□□□ -0.52
DDB1-222	ENST00000543627	PCED1B	Q96HM7	432 aa		11.78	□□□□□ -0.52
DDB1-222	ENST00000543627	TNIP3	Q96KP6	325 aa		11.78	□□□□□ -0.52
DDB1-222	ENST00000543627	CEP63	Q96MT8	703 aa		11.78	□□□□□ -0.52
DDB1-222	ENST00000543627	APOBEC3G	Q9HC16	384 aa	Known RBP	11.78	□□□□□ -0.52
DDB1-222	ENST00000543627	METTL14	Q9HCE5	456 aa	Known RBP	11.78	□□□□□ -0.52
DDB1-222	ENST00000543627	TRPC7	Q9HCX4	862 aa		11.78	□□□□□ -0.52
DDB1-222	ENST00000543627	CA14	Q9ULX7	337 aa		11.78	□□□□□ -0.52
DDB1-222	ENST00000543627	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	11.78	□□□□□ -0.52
DDB1-222	ENST00000543627	TSC2	P49815	1807 aa		11.77	□□□□□ -0.52
DDB1-222	ENST00000543627	SLC38A8	A6NNN8	435 aa		11.77	□□□□□ -0.53
DDB1-222	ENST00000543627	DPYSL4	O14531	572 aa		11.77	□□□□□ -0.53
DDB1-222	ENST00000543627	GPR37L1	O60883	481 aa		11.77	□□□□□ -0.53
DDB1-222	ENST00000543627	PAPLN	O95428	1278 aa		11.77	□□□□□ -0.53
DDB1-222	ENST00000543627	CSH1	P0DML2	217 aa		11.77	□□□□□ -0.53
DDB1-222	ENST00000543627	CSH2	P0DML3	217 aa		11.77	□□□□□ -0.53
DDB1-222	ENST00000543627	TRIM21	P19474	475 aa	Known RBP	11.77	□□□□□ -0.53
DDB1-222	ENST00000543627	ADORA2B	P29275	332 aa		11.77	□□□□□ -0.53
DDB1-222	ENST00000543627	VIPR2	P41587	438 aa		11.77	□□□□□ -0.53
DDB1-222	ENST00000543627	GRM2	Q14416	872 aa		11.77	□□□□□ -0.53
DDB1-222	ENST00000543627	HSP90AA4P	Q58FG1	418 aa		11.77	□□□□□ -0.53
DDB1-222	ENST00000543627	FAM78A	Q5JUQ0	283 aa		11.77	□□□□□ -0.53
DDB1-222	ENST00000543627	TANGO2	Q6ICL3	276 aa		11.77	□□□□□ -0.53
DDB1-222	ENST00000543627	CLEC17A	Q6ZS10	378 aa		11.77	□□□□□ -0.53
DDB1-222	ENST00000543627	HFE2	Q6ZVN8	426 aa		11.77	□□□□□ -0.53
DDB1-222	ENST00000543627	LIMS2	Q7Z4I7	341 aa		11.77	□□□□□ -0.53
DDB1-222	ENST00000543627	FRMD5	Q7Z6J6	570 aa		11.77	□□□□□ -0.53
DDB1-222	ENST00000543627	TMC8	Q8IU68	726 aa		11.77	□□□□□ -0.53
DDB1-222	ENST00000543627	FLCN	Q8NFG4	579 aa		11.77	□□□□□ -0.53
DDB1-222	ENST00000543627	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	11.77	□□□□□ -0.53
DDB1-222	ENST00000543627	TATDN2	Q93075	761 aa		11.77	□□□□□ -0.53
DDB1-222	ENST00000543627	JAKMIP2	Q96AA8	810 aa		11.77	□□□□□ -0.53
DDB1-222	ENST00000543627	B3GNT5	Q9BYG0	378 aa		11.77	□□□□□ -0.53
DDB1-222	ENST00000543627	PLA2G2F	Q9BZM2	168 aa		11.77	□□□□□ -0.53
DDB1-222	ENST00000543627	ZNF518B	Q9C0D4	1074 aa		11.77	□□□□□ -0.53
DDB1-222	ENST00000543627	VRTN	Q9H8Y1	702 aa		11.77	□□□□□ -0.53
DDB1-222	ENST00000543627	ZFP14	Q9HCL3	533 aa		11.77	□□□□□ -0.53
DDB1-222	ENST00000543627	FAM49B	Q9NUQ9	324 aa		11.77	□□□□□ -0.53
DDB1-222	ENST00000543627	GDE1	Q9NZC3	331 aa		11.77	□□□□□ -0.53
DDB1-222	ENST00000543627	HSFX1	Q9UBD0	423 aa		11.77	□□□□□ -0.53
DDB1-222	ENST00000543627		F8VP50	259 aa		11.76	□□□□□ -0.53
DDB1-222	ENST00000543627	MOSPD3	O75425	235 aa		11.76	□□□□□ -0.53
DDB1-222	ENST00000543627	FGF19	O95750	216 aa		11.76	□□□□□ -0.53
DDB1-222	ENST00000543627	PDGFB	P01127	241 aa	Predicted RBP	11.76	□□□□□ -0.53
DDB1-222	ENST00000543627	FAM163B	P0C2L3	166 aa		11.76	□□□□□ -0.53
DDB1-222	ENST00000543627	CCDC192	P0DO97	292 aa		11.76	□□□□□ -0.53
DDB1-222	ENST00000543627	CCDC130	P13994	396 aa		11.76	□□□□□ -0.53
DDB1-222	ENST00000543627	CDC25C	P30307	473 aa		11.76	□□□□□ -0.53
DDB1-222	ENST00000543627	ASPA	P45381	313 aa		11.76	□□□□□ -0.53
DDB1-222	ENST00000543627	MTIF2	P46199	727 aa	Known RBP	11.76	□□□□□ -0.53
DDB1-222	ENST00000543627	NLRP12	P59046	1061 aa		11.76	□□□□□ -0.53
DDB1-222	ENST00000543627	GPC5	P78333	572 aa		11.76	□□□□□ -0.53
DDB1-222	ENST00000543627	CETN1	Q12798	172 aa		11.76	□□□□□ -0.53
DDB1-222	ENST00000543627	HTR4	Q13639	388 aa		11.76	□□□□□ -0.53
DDB1-222	ENST00000543627	POTEH	Q6S545	545 aa		11.76	□□□□□ -0.53
DDB1-222	ENST00000543627	GAREM2	Q75VX8	874 aa		11.76	□□□□□ -0.53
DDB1-222	ENST00000543627	SUGP1	Q8IWZ8	645 aa	Known RBP	11.76	□□□□□ -0.53
DDB1-222	ENST00000543627	YAF2	Q8IY57	180 aa		11.76	□□□□□ -0.53
DDB1-222	ENST00000543627	SIX5	Q8N196	739 aa		11.76	□□□□□ -0.53
DDB1-222	ENST00000543627	MAB21L3	Q8N8X9	362 aa		11.76	□□□□□ -0.53
DDB1-222	ENST00000543627	C12orf29	Q8N999	325 aa		11.76	□□□□□ -0.53
DDB1-222	ENST00000543627	MLKL	Q8NB16	471 aa		11.76	□□□□□ -0.53
DDB1-222	ENST00000543627	MRPS31	Q92665	395 aa	Known RBP	11.76	□□□□□ -0.53
DDB1-222	ENST00000543627	NXPE3	Q969Y0	559 aa		11.76	□□□□□ -0.53
DDB1-222	ENST00000543627	FUBP3	Q96I24	572 aa	Known RBP eCLIP	11.76	□□□□□ -0.53
DDB1-222	ENST00000543627	HEXIM2	Q96MH2	286 aa	Known RBP	11.76	□□□□□ -0.53
DDB1-222	ENST00000543627	PKMYT1	Q99640	499 aa		11.76	□□□□□ -0.53
DDB1-222	ENST00000543627	LRRC3	Q9BY71	257 aa		11.76	□□□□□ -0.53
DDB1-222	ENST00000543627	DNAI2	Q9GZS0	605 aa		11.76	□□□□□ -0.53
DDB1-222	ENST00000543627	NIF3L1	Q9GZT8	377 aa		11.76	□□□□□ -0.53
DDB1-222	ENST00000543627	SMG9	Q9H0W8	520 aa	Known RBP	11.76	□□□□□ -0.53
DDB1-222	ENST00000543627	ABCB6	Q9NP58	842 aa		11.76	□□□□□ -0.53
DDB1-222	ENST00000543627	C11orf16	Q9NQ32	467 aa		11.76	□□□□□ -0.53
DDB1-222	ENST00000543627	AVEN	Q9NQS1	362 aa	Predicted RBP	11.76	□□□□□ -0.53
DDB1-222	ENST00000543627	HMGXB4	Q9UGU5	601 aa		11.76	□□□□□ -0.53
DDB1-222	ENST00000543627	RAPGEFL1	Q9UHV5	662 aa		11.76	□□□□□ -0.53
DDB1-222	ENST00000543627	RWDD2A	Q9UIY3	292 aa		11.76	□□□□□ -0.53
DDB1-222	ENST00000543627	DUSP12	Q9UNI6	340 aa		11.76	□□□□□ -0.53
DDB1-222	ENST00000543627	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	11.76	□□□□□ -0.53
DDB1-222	ENST00000543627	DENND4A	Q7Z401	1863 aa		11.75	□□□□□ -0.53
DDB1-222	ENST00000543627	PRR33	A8MZF0	331 aa		11.75	□□□□□ -0.53
DDB1-222	ENST00000543627	ANHX	E9PGG2	379 aa		11.75	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms