RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 PRAMEF12O95522 483 aa14.04□□□□□ -0.16
TNFRSF1A-215ENST00000543359 C4BPAP04003 597 aaKnown RBP14.04□□□□□ -0.16
TNFRSF1A-215ENST00000543359 FAM163BP0C2L3 166 aa14.04□□□□□ -0.16
TNFRSF1A-215ENST00000543359 PCSK1P29120 753 aa14.04□□□□□ -0.16
TNFRSF1A-215ENST00000543359 MLLT6P55198 1093 aaPredicted RBP14.04□□□□□ -0.16
TNFRSF1A-215ENST00000543359 NLRP12P59046 1061 aa14.04□□□□□ -0.16
TNFRSF1A-215ENST00000543359 CYP4F8P98187 520 aa14.04□□□□□ -0.16
TNFRSF1A-215ENST00000543359 VEPH1Q14D04 833 aa14.04□□□□□ -0.16
TNFRSF1A-215ENST00000543359 DDR2Q16832 855 aa14.04□□□□□ -0.16
TNFRSF1A-215ENST00000543359 C1orf220Q5T0J3 134 aa14.04□□□□□ -0.16
TNFRSF1A-215ENST00000543359 TDRD10Q5VZ19 366 aaKnown RBP14.04□□□□□ -0.16
TNFRSF1A-215ENST00000543359 TPRG1Q6ZUI0 275 aa14.04□□□□□ -0.16
TNFRSF1A-215ENST00000543359 FRMD5Q7Z6J6 570 aa14.04□□□□□ -0.16
TNFRSF1A-215ENST00000543359 C1orf210Q8IVY1 113 aa14.04□□□□□ -0.16
TNFRSF1A-215ENST00000543359 FUBP3Q96I24 572 aaKnown RBP eCLIP14.04□□□□□ -0.16
TNFRSF1A-215ENST00000543359 SYT15Q9BQS2 421 aa14.04□□□□□ -0.16
TNFRSF1A-215ENST00000543359 SLITRK6Q9H5Y7 841 aa14.04□□□□□ -0.16
TNFRSF1A-215ENST00000543359 VRTNQ9H8Y1 702 aa14.04□□□□□ -0.16
TNFRSF1A-215ENST00000543359 CDH9Q9ULB4 789 aa14.04□□□□□ -0.16
TNFRSF1A-215ENST00000543359 KIF26AQ9ULI4 1882 aaPredicted RBP14.04□□□□□ -0.16
TNFRSF1A-215ENST00000543359 FANCMQ8IYD8 2048 aa14.03□□□□□ -0.16
TNFRSF1A-215ENST00000543359 DNAH14Q0VDD8 3507 aa14.03□□□□□ -0.16
TNFRSF1A-215ENST00000543359 DCHS1Q96JQ0 3298 aa14.03□□□□□ -0.16
TNFRSF1A-215ENST00000543359 LRRIQ3A6PVS8 624 aaPredicted RBP14.03□□□□□ -0.16
TNFRSF1A-215ENST00000543359 CHADO15335 359 aa14.03□□□□□ -0.16
TNFRSF1A-215ENST00000543359 VNN1O95497 513 aa14.03□□□□□ -0.16
TNFRSF1A-215ENST00000543359 NR3C1P04150 777 aa14.03□□□□□ -0.16
TNFRSF1A-215ENST00000543359 PDGFRBP09619 1106 aa14.03□□□□□ -0.16
TNFRSF1A-215ENST00000543359 RFX1P22670 979 aa14.03□□□□□ -0.16
TNFRSF1A-215ENST00000543359 CDC25CP30307 473 aa14.03□□□□□ -0.16
TNFRSF1A-215ENST00000543359 MAGEA11P43364 429 aa14.03□□□□□ -0.16
TNFRSF1A-215ENST00000543359 MCCD1P59942 119 aaPredicted RBP14.03□□□□□ -0.16
TNFRSF1A-215ENST00000543359 MYL6P60660 151 aa14.03□□□□□ -0.16
TNFRSF1A-215ENST00000543359 PSMC1P62191 440 aaKnown RBP14.03□□□□□ -0.16
TNFRSF1A-215ENST00000543359 DLG4P78352 724 aa14.03□□□□□ -0.16
TNFRSF1A-215ENST00000543359 UBXN2BQ14CS0 331 aa14.03□□□□□ -0.16
TNFRSF1A-215ENST00000543359 ZNF852Q6ZMS4 543 aa14.03□□□□□ -0.16
TNFRSF1A-215ENST00000543359 MYCBPAPQ8TBZ2 947 aa14.03□□□□□ -0.16
TNFRSF1A-215ENST00000543359 TRMT2BQ96GJ1 504 aaKnown RBP14.03□□□□□ -0.16
TNFRSF1A-215ENST00000543359 NELL2Q99435 816 aa14.03□□□□□ -0.16
TNFRSF1A-215ENST00000543359 OBP2AQ9NY56 170 aa14.03□□□□□ -0.16
TNFRSF1A-215ENST00000543359 TRAF3IP3Q9Y228 551 aa14.03□□□□□ -0.16
TNFRSF1A-215ENST00000543359 PATJQ8NI35 1801 aa14.03□□□□□ -0.16
TNFRSF1A-215ENST00000543359 ANAPC1Q9H1A4 1944 aa14.02□□□□□ -0.16
TNFRSF1A-215ENST00000543359 SLC38A8A6NNN8 435 aa14.02□□□□□ -0.17
TNFRSF1A-215ENST00000543359 SOBPA7XYQ1 873 aa14.02□□□□□ -0.17
TNFRSF1A-215ENST00000543359 ZNF263O14978 683 aa14.02□□□□□ -0.17
TNFRSF1A-215ENST00000543359 CSH1P0DML2 217 aa14.02□□□□□ -0.17
TNFRSF1A-215ENST00000543359 CSH2P0DML3 217 aa14.02□□□□□ -0.17
TNFRSF1A-215ENST00000543359 ATICP31939 592 aa14.02□□□□□ -0.17
TNFRSF1A-215ENST00000543359 GNL1P36915 607 aaPredicted RBP14.02□□□□□ -0.17
TNFRSF1A-215ENST00000543359 RPL10AP62906 217 aaKnown RBP14.02□□□□□ -0.17
TNFRSF1A-215ENST00000543359 KCNB1Q14721 858 aa14.02□□□□□ -0.17
TNFRSF1A-215ENST00000543359 NFIL3Q16649 462 aa14.02□□□□□ -0.17
TNFRSF1A-215ENST00000543359 WDR72Q3MJ13 1102 aa14.02□□□□□ -0.17
TNFRSF1A-215ENST00000543359 ARHGAP15Q53QZ3 475 aa14.02□□□□□ -0.17
TNFRSF1A-215ENST00000543359 WDR44Q5JSH3 913 aa14.02□□□□□ -0.17
TNFRSF1A-215ENST00000543359 ASCL5Q7RTU5 278 aa14.02□□□□□ -0.17
TNFRSF1A-215ENST00000543359 CMTM8Q8IZV2 173 aa14.02□□□□□ -0.17
TNFRSF1A-215ENST00000543359 FMR1NBQ8N0W7 255 aaPredicted RBP14.02□□□□□ -0.17
TNFRSF1A-215ENST00000543359 ENGASEQ8NFI3 743 aa14.02□□□□□ -0.17
TNFRSF1A-215ENST00000543359 RIN3Q8TB24 985 aa14.02□□□□□ -0.17
TNFRSF1A-215ENST00000543359 MYLPFQ96A32 169 aa14.02□□□□□ -0.17
TNFRSF1A-215ENST00000543359 ZFYVE19Q96K21 471 aa14.02□□□□□ -0.17
TNFRSF1A-215ENST00000543359 MMS19Q96T76 1030 aa14.02□□□□□ -0.17
TNFRSF1A-215ENST00000543359 SMG9Q9H0W8 520 aaKnown RBP14.02□□□□□ -0.17
TNFRSF1A-215ENST00000543359 TMEM30AQ9NV96 361 aa14.02□□□□□ -0.17
TNFRSF1A-215ENST00000543359 CCL26Q9Y258 94 aa14.02□□□□□ -0.17
TNFRSF1A-215ENST00000543359 R3HCC1Q9Y3T6 440 aaKnown RBP14.02□□□□□ -0.17
TNFRSF1A-215ENST00000543359 PRR23AA6NEV1 266 aa14.01□□□□□ -0.17
TNFRSF1A-215ENST00000543359 MAN2B1O00754 1011 aa14.01□□□□□ -0.17
TNFRSF1A-215ENST00000543359 BDNFP23560 247 aa14.01□□□□□ -0.17
TNFRSF1A-215ENST00000543359 RPS9P46781 194 aaKnown RBP14.01□□□□□ -0.17
TNFRSF1A-215ENST00000543359 AP3M2P53677 418 aa14.01□□□□□ -0.17
TNFRSF1A-215ENST00000543359 CDH8P55286 799 aa14.01□□□□□ -0.17
TNFRSF1A-215ENST00000543359 BECN1Q14457 450 aa14.01□□□□□ -0.17
TNFRSF1A-215ENST00000543359 TAF12Q16514 161 aa14.01□□□□□ -0.17
TNFRSF1A-215ENST00000543359 ZACNQ401N2 412 aa14.01□□□□□ -0.17
TNFRSF1A-215ENST00000543359 ZCWPW2Q504Y3 356 aa14.01□□□□□ -0.17
TNFRSF1A-215ENST00000543359 TXNDC8Q6A555 127 aa14.01□□□□□ -0.17
TNFRSF1A-215ENST00000543359 VSTM1Q6UX27 236 aa14.01□□□□□ -0.17
TNFRSF1A-215ENST00000543359 MON1AQ86VX9 555 aa14.01□□□□□ -0.17
TNFRSF1A-215ENST00000543359 SPATA2LQ8IUW3 424 aaPredicted RBP14.01□□□□□ -0.17
TNFRSF1A-215ENST00000543359 GUF1Q8N442 669 aaKnown RBP14.01□□□□□ -0.17
TNFRSF1A-215ENST00000543359 USP13Q92995 863 aaPredicted RBP14.01□□□□□ -0.17
TNFRSF1A-215ENST00000543359 ELMO3Q96BJ8 720 aa14.01□□□□□ -0.17
TNFRSF1A-215ENST00000543359 PCED1BQ96HM7 432 aa14.01□□□□□ -0.17
TNFRSF1A-215ENST00000543359 SPATA17Q96L03 361 aa14.01□□□□□ -0.17
TNFRSF1A-215ENST00000543359 FAM83CQ9BQN1 747 aa14.01□□□□□ -0.17
TNFRSF1A-215ENST00000543359 BCO2Q9BYV7 579 aa14.01□□□□□ -0.17
TNFRSF1A-215ENST00000543359 DPEP3Q9H4B8 488 aa14.01□□□□□ -0.17
TNFRSF1A-215ENST00000543359 ZMYM5Q9UJ78 669 aa14.01□□□□□ -0.17
TNFRSF1A-215ENST00000543359 MAPK8IP1Q9UQF2 711 aa14.01□□□□□ -0.17
TNFRSF1A-215ENST00000543359 PIAS3Q9Y6X2 628 aa14.01□□□□□ -0.17
TNFRSF1A-215ENST00000543359 ZNF638Q14966 1978 aaKnown RBP14□□□□□ -0.17
TNFRSF1A-215ENST00000543359 IKBKBO14920 756 aa14□□□□□ -0.17
TNFRSF1A-215ENST00000543359 MAPK13O15264 365 aa14□□□□□ -0.17
TNFRSF1A-215ENST00000543359 GFRA3O60609 400 aa14□□□□□ -0.17
TNFRSF1A-215ENST00000543359 SP9P0CG40 484 aa14□□□□□ -0.17
TNFRSF1A-215ENST00000543359 PTPN1P18031 435 aaKnown RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms