RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 CLCNKBP51801 687 aa9.85□□□□□ -0.83
GNE-206ENST00000543356 UPP1Q16831 310 aa9.85□□□□□ -0.83
GNE-206ENST00000543356 GLE1Q53GS7 698 aaKnown RBP9.85□□□□□ -0.83
GNE-206ENST00000543356 PPP1R26Q5T8A7 1209 aaPredicted RBP9.85□□□□□ -0.83
GNE-206ENST00000543356 CYP4A22Q5TCH4 519 aa9.85□□□□□ -0.83
GNE-206ENST00000543356 WDR93Q6P2C0 686 aa9.85□□□□□ -0.83
GNE-206ENST00000543356 SLC24A5Q71RS6 500 aa9.85□□□□□ -0.83
GNE-206ENST00000543356 XYLT1Q86Y38 959 aa9.85□□□□□ -0.83
GNE-206ENST00000543356 TMEM86AQ8N2M4 240 aa9.85□□□□□ -0.83
GNE-206ENST00000543356 NIPA2Q8N8Q9 360 aa9.85□□□□□ -0.83
GNE-206ENST00000543356 C12orf29Q8N999 325 aa9.85□□□□□ -0.83
GNE-206ENST00000543356 SPATA18Q8TC71 538 aa9.85□□□□□ -0.83
GNE-206ENST00000543356 TNIP3Q96KP6 325 aa9.85□□□□□ -0.83
GNE-206ENST00000543356 PNKPQ96T60 521 aa9.85□□□□□ -0.83
GNE-206ENST00000543356 RHOXF2Q9BQY4 288 aa9.85□□□□□ -0.83
GNE-206ENST00000543356 RNF208Q9H0X6 261 aa9.85□□□□□ -0.83
GNE-206ENST00000543356 DPEP3Q9H4B8 488 aa9.85□□□□□ -0.83
GNE-206ENST00000543356 SIGLEC16A6NMB1 481 aa9.85□□□□□ -0.83
GNE-206ENST00000543356 GABRDO14764 452 aa9.85□□□□□ -0.83
GNE-206ENST00000543356 MCM3P25205 808 aa9.85□□□□□ -0.83
GNE-206ENST00000543356 RWDD2BP57060 319 aa9.85□□□□□ -0.83
GNE-206ENST00000543356 PSMC1P62191 440 aaKnown RBP9.85□□□□□ -0.83
GNE-206ENST00000543356 SATB1Q01826 763 aa9.85□□□□□ -0.83
GNE-206ENST00000543356 TUSC3Q13454 348 aa9.85□□□□□ -0.83
GNE-206ENST00000543356 BRD3Q15059 726 aa9.85□□□□□ -0.83
GNE-206ENST00000543356 SEL1L2Q5TEA6 688 aa9.85□□□□□ -0.83
GNE-206ENST00000543356 RTN4RL1Q86UN2 441 aaPredicted RBP9.85□□□□□ -0.83
GNE-206ENST00000543356 OSTM1Q86WC4 334 aa9.85□□□□□ -0.83
GNE-206ENST00000543356 CPNE8Q86YQ8 564 aa9.85□□□□□ -0.83
GNE-206ENST00000543356 RNF169Q8NCN4 708 aa9.85□□□□□ -0.83
GNE-206ENST00000543356 FNIP1Q8TF40 1166 aa9.85□□□□□ -0.83
GNE-206ENST00000543356 STK32AQ8WU08 396 aa9.85□□□□□ -0.83
GNE-206ENST00000543356 MCRS1Q96EZ8 462 aa9.85□□□□□ -0.83
GNE-206ENST00000543356 MCEEQ96PE7 176 aa9.85□□□□□ -0.83
GNE-206ENST00000543356 CRISPLD2Q9H0B8 497 aa9.85□□□□□ -0.83
GNE-206ENST00000543356 SYNCQ9H7C4 482 aa9.85□□□□□ -0.83
GNE-206ENST00000543356 FAM53CQ9NYF3 392 aa9.85□□□□□ -0.83
GNE-206ENST00000543356 HESX1Q9UBX0 185 aa9.85□□□□□ -0.83
GNE-206ENST00000543356 COL6A1P12109 1028 aa9.84□□□□□ -0.83
GNE-206ENST00000543356 RPL7AP62424 266 aaKnown RBP9.84□□□□□ -0.83
GNE-206ENST00000543356 ZNF252P-AS1Q0IIN9 211 aa9.84□□□□□ -0.83
GNE-206ENST00000543356 DCUN1D2Q6PH85 259 aa9.84□□□□□ -0.83
GNE-206ENST00000543356 TTC30AQ86WT1 665 aa9.84□□□□□ -0.83
GNE-206ENST00000543356 UBA3Q8TBC4 463 aa9.84□□□□□ -0.83
GNE-206ENST00000543356 RNF217Q8TC41 542 aa9.84□□□□□ -0.83
GNE-206ENST00000543356 SENP8Q96LD8 212 aa9.84□□□□□ -0.83
GNE-206ENST00000543356 CYLDQ9NQC7 956 aa9.84□□□□□ -0.83
GNE-206ENST00000543356 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.84□□□□□ -0.83
GNE-206ENST00000543356 CCDC151A5D8V7 595 aa9.84□□□□□ -0.83
GNE-206ENST00000543356 CASTOR2A6NHX0 329 aa9.84□□□□□ -0.83
GNE-206ENST00000543356 GJB6O95452 261 aa9.84□□□□□ -0.83
GNE-206ENST00000543356 POMCP01189 267 aa9.84□□□□□ -0.83
GNE-206ENST00000543356 FGGP02679 453 aa9.84□□□□□ -0.83
GNE-206ENST00000543356 LMO2P25791 158 aa9.84□□□□□ -0.83
GNE-206ENST00000543356 CLCN6P51797 869 aa9.84□□□□□ -0.83
GNE-206ENST00000543356 BCAT1P54687 386 aa9.84□□□□□ -0.83
GNE-206ENST00000543356 SNX16P57768 344 aa9.84□□□□□ -0.83
GNE-206ENST00000543356 PIGHQ14442 188 aaPredicted RBP9.84□□□□□ -0.83
GNE-206ENST00000543356 PLEKHG4Q58EX7 1191 aa9.84□□□□□ -0.83
GNE-206ENST00000543356 C8orf74Q6P047 294 aa9.84□□□□□ -0.83
GNE-206ENST00000543356 ANKRD33Q7Z3H0 272 aa9.84□□□□□ -0.83
GNE-206ENST00000543356 RHOT1Q8IXI2 618 aa9.84□□□□□ -0.83
GNE-206ENST00000543356 ANKRD52Q8NB46 1076 aa9.84□□□□□ -0.83
GNE-206ENST00000543356 B3GALNT2Q8NCR0 500 aa9.84□□□□□ -0.83
GNE-206ENST00000543356 C3orf58Q8NDZ4 430 aa9.84□□□□□ -0.83
GNE-206ENST00000543356 APBB2Q92870 758 aa9.84□□□□□ -0.83
GNE-206ENST00000543356 PLVAPQ9BX97 442 aa9.84□□□□□ -0.83
GNE-206ENST00000543356 SLC4A5Q9BY07 1137 aa9.84□□□□□ -0.83
GNE-206ENST00000543356 ELAC1Q9H777 363 aaKnown RBP9.84□□□□□ -0.83
GNE-206ENST00000543356 FAM49BQ9NUQ9 324 aa9.84□□□□□ -0.83
GNE-206ENST00000543356 TJP2Q9UDY2 1190 aa9.84□□□□□ -0.83
GNE-206ENST00000543356 SH3BP1Q9Y3L3 701 aa9.84□□□□□ -0.83
GNE-206ENST00000543356 KRIT1O00522 736 aa9.83□□□□□ -0.84
GNE-206ENST00000543356 HCRTO43612 131 aa9.83□□□□□ -0.84
GNE-206ENST00000543356 NBNO60934 754 aa9.83□□□□□ -0.84
GNE-206ENST00000543356 PDGFRBP09619 1106 aa9.83□□□□□ -0.84
GNE-206ENST00000543356 KRT3P12035 628 aa9.83□□□□□ -0.84
GNE-206ENST00000543356 LHX1P48742 406 aa9.83□□□□□ -0.84
GNE-206ENST00000543356 RPL34P49207 117 aaKnown RBP9.83□□□□□ -0.84
GNE-206ENST00000543356 RNASE9P60153 205 aaKnown RBP9.83□□□□□ -0.84
GNE-206ENST00000543356 OGDHQ02218 1023 aa9.83□□□□□ -0.84
GNE-206ENST00000543356 BST2Q10589 180 aaKnown RBP9.83□□□□□ -0.84
GNE-206ENST00000543356 ZNF211Q13398 564 aaPredicted RBP9.83□□□□□ -0.84
GNE-206ENST00000543356 PPP2R5EQ16537 467 aa9.83□□□□□ -0.84
GNE-206ENST00000543356 LONRF2Q1L5Z9 754 aa9.83□□□□□ -0.84
GNE-206ENST00000543356 LRRC38Q5VT99 294 aa9.83□□□□□ -0.84
GNE-206ENST00000543356 WSCD1Q658N2 575 aa9.83□□□□□ -0.84
GNE-206ENST00000543356 GLB1LQ6UWU2 654 aa9.83□□□□□ -0.84
GNE-206ENST00000543356 DSTYKQ6XUX3 929 aa9.83□□□□□ -0.84
GNE-206ENST00000543356 KATNAL2Q8IYT4 538 aa9.83□□□□□ -0.84
GNE-206ENST00000543356 SLC35F5Q8WV83 523 aa9.83□□□□□ -0.84
GNE-206ENST00000543356 HNRNPLLQ8WVV9 542 aaKnown RBP9.83□□□□□ -0.84
GNE-206ENST00000543356 LRRC1Q9BTT6 524 aa9.83□□□□□ -0.84
GNE-206ENST00000543356 CACNG4Q9UBN1 327 aa9.83□□□□□ -0.84
GNE-206ENST00000543356 GOLGA8SH3BPF8 625 aa9.83□□□□□ -0.84
GNE-206ENST00000543356 PARNO95453 639 aaKnown RBP9.83□□□□□ -0.84
GNE-206ENST00000543356 PYGMP11217 842 aa9.83□□□□□ -0.84
GNE-206ENST00000543356 ODC1P11926 461 aa9.83□□□□□ -0.84
GNE-206ENST00000543356 CCDC130P13994 396 aa9.83□□□□□ -0.84
GNE-206ENST00000543356 MNX1P50219 401 aaPredicted RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms