RNA–Protein interactions for RNA: ENST00000543115.5

PTPN6-220, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 4

Gene PTPN6, Length 650 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-220ENST00000543115 FAM171BQ6P995 826 aa12.93□□□□□ -0.34
PTPN6-220ENST00000543115 UNC13DQ70J99 1090 aa12.93□□□□□ -0.34
PTPN6-220ENST00000543115 TRAPPC11Q7Z392 1133 aa12.93□□□□□ -0.34
PTPN6-220ENST00000543115 WDR49Q8IV35 697 aa12.93□□□□□ -0.34
PTPN6-220ENST00000543115 SPATA18Q8TC71 538 aa12.93□□□□□ -0.34
PTPN6-220ENST00000543115 HPDLQ96IR7 371 aa12.93□□□□□ -0.34
PTPN6-220ENST00000543115 FAM83CQ9BQN1 747 aa12.93□□□□□ -0.34
PTPN6-220ENST00000543115 GZF1Q9H116 711 aaPredicted RBP12.93□□□□□ -0.34
PTPN6-220ENST00000543115 CRTAC1Q9NQ79 661 aa12.93□□□□□ -0.34
PTPN6-220ENST00000543115 HPS4Q9NQG7 708 aa12.93□□□□□ -0.34
PTPN6-220ENST00000543115 NCDNQ9UBB6 729 aa12.93□□□□□ -0.34
PTPN6-220ENST00000543115 PCDHA7Q9UN72 937 aa12.93□□□□□ -0.34
PTPN6-220ENST00000543115 TNNC2P02585 160 aa12.92□□□□□ -0.34
PTPN6-220ENST00000543115 DLATP10515 647 aaKnown RBP12.92□□□□□ -0.34
PTPN6-220ENST00000543115 DDX6P26196 483 aaKnown RBP eCLIP12.92□□□□□ -0.34
PTPN6-220ENST00000543115 PCSK1P29120 753 aa12.92□□□□□ -0.34
PTPN6-220ENST00000543115 AVPR1AP37288 418 aa12.92□□□□□ -0.34
PTPN6-220ENST00000543115 CXCL12P48061 93 aa12.92□□□□□ -0.34
PTPN6-220ENST00000543115 CYP2J2P51589 502 aa12.92□□□□□ -0.34
PTPN6-220ENST00000543115 PLCB2Q00722 1185 aa12.92□□□□□ -0.34
PTPN6-220ENST00000543115 MYO1EQ12965 1108 aa12.92□□□□□ -0.34
PTPN6-220ENST00000543115 CUL4BQ13620 913 aa12.92□□□□□ -0.34
PTPN6-220ENST00000543115 CCINQ13939 588 aa12.92□□□□□ -0.34
PTPN6-220ENST00000543115 LRRC32Q14392 662 aa12.92□□□□□ -0.34
PTPN6-220ENST00000543115 SURF1Q15526 300 aa12.92□□□□□ -0.34
PTPN6-220ENST00000543115 SNRNP35Q16560 246 aaKnown RBP12.92□□□□□ -0.34
PTPN6-220ENST00000543115 C1orf228Q6PIY5 440 aa12.92□□□□□ -0.34
PTPN6-220ENST00000543115 DPH6Q7L8W6 267 aa12.92□□□□□ -0.34
PTPN6-220ENST00000543115 MON1AQ86VX9 555 aa12.92□□□□□ -0.34
PTPN6-220ENST00000543115 SPATA2LQ8IUW3 424 aaPredicted RBP12.92□□□□□ -0.34
PTPN6-220ENST00000543115 SCN4BQ8IWT1 228 aa12.92□□□□□ -0.34
PTPN6-220ENST00000543115 GRAMD1CQ8IYS0 662 aa12.92□□□□□ -0.34
PTPN6-220ENST00000543115 SPEM1Q8N4L4 309 aa12.92□□□□□ -0.34
PTPN6-220ENST00000543115 ZNF516Q92618 1163 aa12.92□□□□□ -0.34
PTPN6-220ENST00000543115 MRPS31Q92665 395 aaKnown RBP12.92□□□□□ -0.34
PTPN6-220ENST00000543115 MYLPFQ96A32 169 aa12.92□□□□□ -0.34
PTPN6-220ENST00000543115 TRMT2BQ96GJ1 504 aaKnown RBP12.92□□□□□ -0.34
PTPN6-220ENST00000543115 MYRFLQ96LU7 910 aa12.92□□□□□ -0.34
PTPN6-220ENST00000543115 SLC22A12Q96S37 553 aa12.92□□□□□ -0.34
PTPN6-220ENST00000543115 SYT15Q9BQS2 421 aa12.92□□□□□ -0.34
PTPN6-220ENST00000543115 FAM126AQ9BYI3 521 aaPredicted RBP12.92□□□□□ -0.34
PTPN6-220ENST00000543115 EBF3Q9H4W6 596 aa12.92□□□□□ -0.34
PTPN6-220ENST00000543115 KIAA1586Q9HCI6 787 aa12.92□□□□□ -0.34
PTPN6-220ENST00000543115 SLC39A2Q9NP94 309 aa12.92□□□□□ -0.34
PTPN6-220ENST00000543115 TDP1Q9NUW8 608 aa12.92□□□□□ -0.34
PTPN6-220ENST00000543115 ZMYM5Q9UJ78 669 aa12.92□□□□□ -0.34
PTPN6-220ENST00000543115 DCHS1Q96JQ0 3298 aa12.92□□□□□ -0.34
PTPN6-220ENST00000543115 KIF26AQ9ULI4 1882 aaPredicted RBP12.91□□□□□ -0.34
PTPN6-220ENST00000543115 K7ESF4 209 aa12.91□□□□□ -0.34
PTPN6-220ENST00000543115 PDGFRBP09619 1106 aa12.91□□□□□ -0.34
PTPN6-220ENST00000543115 ARSAP15289 507 aa12.91□□□□□ -0.34
PTPN6-220ENST00000543115 AFMP43652 599 aa12.91□□□□□ -0.34
PTPN6-220ENST00000543115 ME1P48163 572 aa12.91□□□□□ -0.34
PTPN6-220ENST00000543115 DNM1Q05193 864 aaKnown RBP12.91□□□□□ -0.34
PTPN6-220ENST00000543115 CYP24A1Q07973 514 aa12.91□□□□□ -0.34
PTPN6-220ENST00000543115 RUNX3Q13761 415 aa12.91□□□□□ -0.34
PTPN6-220ENST00000543115 PSMD6Q15008 389 aa12.91□□□□□ -0.34
PTPN6-220ENST00000543115 LPAL2Q16609 132 aa12.91□□□□□ -0.34
PTPN6-220ENST00000543115 ITPRIPL2Q3MIP1 535 aa12.91□□□□□ -0.34
PTPN6-220ENST00000543115 DGKKQ5KSL6 1271 aa12.91□□□□□ -0.34
PTPN6-220ENST00000543115 RESP18Q5W5W9 173 aa12.91□□□□□ -0.34
PTPN6-220ENST00000543115 PKN3Q6P5Z2 889 aa12.91□□□□□ -0.34
PTPN6-220ENST00000543115 HSCBQ8IWL3 235 aa12.91□□□□□ -0.34
PTPN6-220ENST00000543115 SPRYD3Q8NCJ5 442 aa12.91□□□□□ -0.34
PTPN6-220ENST00000543115 CCDC127Q96BQ5 260 aa12.91□□□□□ -0.34
PTPN6-220ENST00000543115 FUBP3Q96I24 572 aaKnown RBP eCLIP12.91□□□□□ -0.34
PTPN6-220ENST00000543115 CYP2S1Q96SQ9 504 aa12.91□□□□□ -0.34
PTPN6-220ENST00000543115 CGRRF1Q99675 332 aa12.91□□□□□ -0.34
PTPN6-220ENST00000543115 MRPL45Q9BRJ2 306 aaKnown RBP12.91□□□□□ -0.34
PTPN6-220ENST00000543115 KIF9Q9HAQ2 790 aa12.91□□□□□ -0.34
PTPN6-220ENST00000543115 MAGEF1Q9HAY2 307 aa12.91□□□□□ -0.34
PTPN6-220ENST00000543115 THG1LQ9NWX6 298 aaKnown RBP12.91□□□□□ -0.34
PTPN6-220ENST00000543115 CDH9Q9ULB4 789 aa12.91□□□□□ -0.34
PTPN6-220ENST00000543115 R3HCC1Q9Y3T6 440 aaKnown RBP12.91□□□□□ -0.34
PTPN6-220ENST00000543115 GVINP1Q7Z2Y8 2422 aa12.91□□□□□ -0.34
PTPN6-220ENST00000543115 UBE4BO95155 1302 aa12.9□□□□□ -0.34
PTPN6-220ENST00000543115 C2orf78A6NCI8 922 aa12.9□□□□□ -0.34
PTPN6-220ENST00000543115 CHURC1-FNTBB4DL54 471 aa12.9□□□□□ -0.34
PTPN6-220ENST00000543115 HSP90AA1P07900 732 aaKnown RBP12.9□□□□□ -0.34
PTPN6-220ENST00000543115 TNNI1P19237 187 aa12.9□□□□□ -0.34
PTPN6-220ENST00000543115 TGM1P22735 817 aa12.9□□□□□ -0.34
PTPN6-220ENST00000543115 WARSP23381 471 aaKnown RBP12.9□□□□□ -0.34
PTPN6-220ENST00000543115 BDNFP23560 247 aa12.9□□□□□ -0.34
PTPN6-220ENST00000543115 MAGEA11P43364 429 aa12.9□□□□□ -0.34
PTPN6-220ENST00000543115 FNTBP49356 437 aa12.9□□□□□ -0.34
PTPN6-220ENST00000543115 NRLP54845 237 aa12.9□□□□□ -0.34
PTPN6-220ENST00000543115 SRSF5Q13243 272 aaKnown RBP12.9□□□□□ -0.34
PTPN6-220ENST00000543115 PPP2R5DQ14738 602 aa12.9□□□□□ -0.34
PTPN6-220ENST00000543115 BMT2Q1RMZ1 405 aa12.9□□□□□ -0.34
PTPN6-220ENST00000543115 NAIF1Q69YI7 327 aaPredicted RBP12.9□□□□□ -0.34
PTPN6-220ENST00000543115 FSTL4Q6MZW2 842 aa12.9□□□□□ -0.34
PTPN6-220ENST00000543115 ERMP1Q7Z2K6 904 aa12.9□□□□□ -0.34
PTPN6-220ENST00000543115 XXYLT1Q8NBI6 393 aa12.9□□□□□ -0.34
PTPN6-220ENST00000543115 PLEKHO2Q8TD55 490 aa12.9□□□□□ -0.34
PTPN6-220ENST00000543115 PCED1BQ96HM7 432 aa12.9□□□□□ -0.34
PTPN6-220ENST00000543115 CHAMP1Q96JM3 812 aa12.9□□□□□ -0.34
PTPN6-220ENST00000543115 MMS19Q96T76 1030 aa12.9□□□□□ -0.34
PTPN6-220ENST00000543115 FBRSL1Q9HCM7 1045 aaKnown RBP12.9□□□□□ -0.34
PTPN6-220ENST00000543115 TRPC7Q9HCX4 862 aa12.9□□□□□ -0.34
PTPN6-220ENST00000543115 FAM13BQ9NYF5 915 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms