RNA–Protein interactions for RNA: ENST00000542848.5

PTPN6-219, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-219ENST00000542848 SAAL1Q96ER3 474 aa12.74□□□□□ -0.37
PTPN6-219ENST00000542848 TRMT2BQ96GJ1 504 aaKnown RBP12.74□□□□□ -0.37
PTPN6-219ENST00000542848 EBF3Q9H4W6 596 aa12.74□□□□□ -0.37
PTPN6-219ENST00000542848 TMEM206Q9H813 350 aa12.74□□□□□ -0.37
PTPN6-219ENST00000542848 MAGED2Q9UNF1 606 aaPredicted RBP12.74□□□□□ -0.37
PTPN6-219ENST00000542848 CCL26Q9Y258 94 aa12.74□□□□□ -0.37
PTPN6-219ENST00000542848 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.74□□□□□ -0.37
PTPN6-219ENST00000542848 ABCA7Q8IZY2 2146 aa12.74□□□□□ -0.37
PTPN6-219ENST00000542848 KMT2BQ9UMN6 2715 aaPredicted RBP12.73□□□□□ -0.37
PTPN6-219ENST00000542848 CEP192Q8TEP8 1941 aa12.73□□□□□ -0.37
PTPN6-219ENST00000542848 OTOL1A6NHN0 477 aaPredicted RBP12.73□□□□□ -0.37
PTPN6-219ENST00000542848 TULP1O00294 542 aaPredicted RBP12.73□□□□□ -0.37
PTPN6-219ENST00000542848 GABRDO14764 452 aa12.73□□□□□ -0.37
PTPN6-219ENST00000542848 KIAA0391O15091 583 aaKnown RBP12.73□□□□□ -0.37
PTPN6-219ENST00000542848 NOL4O94818 638 aa12.73□□□□□ -0.37
PTPN6-219ENST00000542848 IDEP14735 1019 aa12.73□□□□□ -0.37
PTPN6-219ENST00000542848 DRD1P21728 446 aa12.73□□□□□ -0.37
PTPN6-219ENST00000542848 CYP2F1P24903 491 aa12.73□□□□□ -0.37
PTPN6-219ENST00000542848 GPR15P49685 360 aa12.73□□□□□ -0.37
PTPN6-219ENST00000542848 RESTQ13127 1097 aa12.73□□□□□ -0.37
PTPN6-219ENST00000542848 SLC39A14Q15043 492 aa12.73□□□□□ -0.37
PTPN6-219ENST00000542848 PDGFRLQ15198 375 aa12.73□□□□□ -0.37
PTPN6-219ENST00000542848 DDR2Q16832 855 aa12.73□□□□□ -0.37
PTPN6-219ENST00000542848 CFAP221Q4G0U5 840 aa12.73□□□□□ -0.37
PTPN6-219ENST00000542848 FSTL4Q6MZW2 842 aa12.73□□□□□ -0.37
PTPN6-219ENST00000542848 DPH6Q7L8W6 267 aa12.73□□□□□ -0.37
PTPN6-219ENST00000542848 FAM160A2Q8N612 972 aaPredicted RBP12.73□□□□□ -0.37
PTPN6-219ENST00000542848 EXOC4Q96A65 974 aa12.73□□□□□ -0.37
PTPN6-219ENST00000542848 FUBP3Q96I24 572 aaKnown RBP eCLIP12.73□□□□□ -0.37
PTPN6-219ENST00000542848 LOXL4Q96JB6 756 aa12.73□□□□□ -0.37
PTPN6-219ENST00000542848 PKMYT1Q99640 499 aa12.73□□□□□ -0.37
PTPN6-219ENST00000542848 PANK4Q9NVE7 773 aa12.73□□□□□ -0.37
PTPN6-219ENST00000542848 GTF3C4Q9UKN8 822 aa12.73□□□□□ -0.37
PTPN6-219ENST00000542848 SNX9Q9Y5X1 595 aa12.73□□□□□ -0.37
PTPN6-219ENST00000542848 PI4KAP42356 2102 aa12.73□□□□□ -0.37
PTPN6-219ENST00000542848 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.72□□□□□ -0.37
PTPN6-219ENST00000542848 GOLGA8IPA6NC78 632 aa12.72□□□□□ -0.37
PTPN6-219ENST00000542848 GOLGA8JA6NMD2 632 aa12.72□□□□□ -0.37
PTPN6-219ENST00000542848 KRT19P08727 400 aa12.72□□□□□ -0.37
PTPN6-219ENST00000542848 USP17L7P0C7H9 530 aa12.72□□□□□ -0.37
PTPN6-219ENST00000542848 TMEM191BP0C7N4 346 aa12.72□□□□□ -0.37
PTPN6-219ENST00000542848 SYT1P21579 422 aa12.72□□□□□ -0.37
PTPN6-219ENST00000542848 ACAT1P24752 427 aaKnown RBP12.72□□□□□ -0.37
PTPN6-219ENST00000542848 PCSK1P29120 753 aa12.72□□□□□ -0.37
PTPN6-219ENST00000542848 STAT6P42226 847 aa12.72□□□□□ -0.37
PTPN6-219ENST00000542848 MAGEA11P43364 429 aa12.72□□□□□ -0.37
PTPN6-219ENST00000542848 GALK1P51570 392 aa12.72□□□□□ -0.37
PTPN6-219ENST00000542848 CEBPZQ03701 1054 aaKnown RBP12.72□□□□□ -0.37
PTPN6-219ENST00000542848 FAM160A1Q05DH4 1040 aa12.72□□□□□ -0.37
PTPN6-219ENST00000542848 MYO1EQ12965 1108 aa12.72□□□□□ -0.37
PTPN6-219ENST00000542848 SURF1Q15526 300 aa12.72□□□□□ -0.37
PTPN6-219ENST00000542848 SDHAF4Q5VUM1 108 aa12.72□□□□□ -0.37
PTPN6-219ENST00000542848 TRIM68Q6AZZ1 485 aa12.72□□□□□ -0.37
PTPN6-219ENST00000542848 FAM171BQ6P995 826 aa12.72□□□□□ -0.37
PTPN6-219ENST00000542848 CACNA2D4Q7Z3S7 1137 aa12.72□□□□□ -0.37
PTPN6-219ENST00000542848 OSTM1Q86WC4 334 aa12.72□□□□□ -0.37
PTPN6-219ENST00000542848 SPATA2LQ8IUW3 424 aaPredicted RBP12.72□□□□□ -0.37
PTPN6-219ENST00000542848 GPD1LQ8N335 351 aa12.72□□□□□ -0.37
PTPN6-219ENST00000542848 CAMKK1Q8N5S9 505 aa12.72□□□□□ -0.37
PTPN6-219ENST00000542848 FSIP1Q8NA03 581 aa12.72□□□□□ -0.37
PTPN6-219ENST00000542848 GAB3Q8WWW8 586 aa12.72□□□□□ -0.37
PTPN6-219ENST00000542848 CHFRQ96EP1 664 aa12.72□□□□□ -0.37
PTPN6-219ENST00000542848 CBWD1Q9BRT8 395 aa12.72□□□□□ -0.37
PTPN6-219ENST00000542848 PANK2Q9BZ23 570 aa12.72□□□□□ -0.37
PTPN6-219ENST00000542848 PCIF1Q9H4Z3 704 aa12.72□□□□□ -0.37
PTPN6-219ENST00000542848 PDE11AQ9HCR9 933 aa12.72□□□□□ -0.37
PTPN6-219ENST00000542848 SIX4Q9UIU6 781 aa12.72□□□□□ -0.37
PTPN6-219ENST00000542848 SLC8A2Q9UPR5 921 aa12.72□□□□□ -0.37
PTPN6-219ENST00000542848 R3HCC1Q9Y3T6 440 aaKnown RBP12.72□□□□□ -0.37
PTPN6-219ENST00000542848 CHD8Q9HCK8 2581 aa12.72□□□□□ -0.37
PTPN6-219ENST00000542848 MAP1BP46821 2468 aaKnown RBP12.71□□□□□ -0.37
PTPN6-219ENST00000542848 TRAV19A0A0A6YYK7 116 aa12.71□□□□□ -0.37
PTPN6-219ENST00000542848 TADA3O75528 432 aa12.71□□□□□ -0.37
PTPN6-219ENST00000542848 RPP40O75818 363 aaKnown RBP12.71□□□□□ -0.37
PTPN6-219ENST00000542848 AKAP3O75969 853 aa12.71□□□□□ -0.37
PTPN6-219ENST00000542848 PRPF6O94906 941 aaKnown RBP12.71□□□□□ -0.37
PTPN6-219ENST00000542848 ARSAP15289 507 aa12.71□□□□□ -0.37
PTPN6-219ENST00000542848 HOXC13P31276 330 aa12.71□□□□□ -0.37
PTPN6-219ENST00000542848 RAP1GAPP47736 663 aa12.71□□□□□ -0.37
PTPN6-219ENST00000542848 MTF1Q14872 753 aa12.71□□□□□ -0.37
PTPN6-219ENST00000542848 SOWAHAQ2M3V2 549 aa12.71□□□□□ -0.37
PTPN6-219ENST00000542848 FBXO43Q4G163 708 aa12.71□□□□□ -0.37
PTPN6-219ENST00000542848 SCARA3Q6AZY7 606 aa12.71□□□□□ -0.37
PTPN6-219ENST00000542848 FAM173BQ6P4H8 233 aa12.71□□□□□ -0.37
PTPN6-219ENST00000542848 PKN3Q6P5Z2 889 aa12.71□□□□□ -0.37
PTPN6-219ENST00000542848 C4orf50Q6ZRC1 276 aa12.71□□□□□ -0.37
PTPN6-219ENST00000542848 STXBP4Q6ZWJ1 553 aa12.71□□□□□ -0.37
PTPN6-219ENST00000542848 LIMS2Q7Z4I7 341 aa12.71□□□□□ -0.37
PTPN6-219ENST00000542848 HSCBQ8IWL3 235 aa12.71□□□□□ -0.37
PTPN6-219ENST00000542848 CCDC65Q8IXS2 484 aa12.71□□□□□ -0.37
PTPN6-219ENST00000542848 ADGRF2Q8IZF7 708 aa12.71□□□□□ -0.37
PTPN6-219ENST00000542848 CPA6Q8N4T0 437 aa12.71□□□□□ -0.37
PTPN6-219ENST00000542848 STKLD1Q8NE28 680 aa12.71□□□□□ -0.37
PTPN6-219ENST00000542848 RIN3Q8TB24 985 aa12.71□□□□□ -0.37
PTPN6-219ENST00000542848 NOC3LQ8WTT2 800 aaKnown RBP12.71□□□□□ -0.37
PTPN6-219ENST00000542848 OSCP1Q8WVF1 389 aa12.71□□□□□ -0.37
PTPN6-219ENST00000542848 ANKRD36BP1Q96IX9 119 aa12.71□□□□□ -0.37
PTPN6-219ENST00000542848 CEP295NLQ96MC4 621 aa12.71□□□□□ -0.37
PTPN6-219ENST00000542848 P2RY13Q9BPV8 354 aa12.71□□□□□ -0.37
PTPN6-219ENST00000542848 FGFBP2Q9BYJ0 223 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms