RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 SOX4Q06945 474 aaPredicted RBP5.21□□□□□ -1.58
LIMS1-214ENST00000542845 SRSF1Q07955 248 aaKnown RBP eCLIP5.21□□□□□ -1.58
LIMS1-214ENST00000542845 PLD1Q13393 1074 aa5.21□□□□□ -1.58
LIMS1-214ENST00000542845 LY6DQ14210 128 aa5.21□□□□□ -1.58
LIMS1-214ENST00000542845 TSGA10IPQ3SY00 556 aa5.21□□□□□ -1.58
LIMS1-214ENST00000542845 EEF1DP3Q658K8 133 aa5.21□□□□□ -1.58
LIMS1-214ENST00000542845 ZNF787Q6DD87 383 aa5.21□□□□□ -1.58
LIMS1-214ENST00000542845 TMPRSS7Q7RTY8 843 aa5.21□□□□□ -1.58
LIMS1-214ENST00000542845 GPR155Q7Z3F1 870 aa5.21□□□□□ -1.58
LIMS1-214ENST00000542845 CHD1LQ86WJ1 897 aa5.21□□□□□ -1.58
LIMS1-214ENST00000542845 ZBTB8OSQ8IWT0 167 aa5.21□□□□□ -1.58
LIMS1-214ENST00000542845 CMTM8Q8IZV2 173 aa5.21□□□□□ -1.58
LIMS1-214ENST00000542845 CPA6Q8N4T0 437 aa5.21□□□□□ -1.58
LIMS1-214ENST00000542845 ALLCQ8N6M5 410 aa5.21□□□□□ -1.58
LIMS1-214ENST00000542845 TTC9BQ8N6N2 239 aa5.21□□□□□ -1.58
LIMS1-214ENST00000542845 LSM14AQ8ND56 463 aaKnown RBP5.21□□□□□ -1.58
LIMS1-214ENST00000542845 RHBDD1Q8TEB9 315 aa5.21□□□□□ -1.58
LIMS1-214ENST00000542845 USP33Q8TEY7 942 aa5.21□□□□□ -1.58
LIMS1-214ENST00000542845 BAP1Q92560 729 aa5.21□□□□□ -1.58
LIMS1-214ENST00000542845 FOXJ1Q92949 421 aa5.21□□□□□ -1.58
LIMS1-214ENST00000542845 ZNF775Q96BV0 537 aaPredicted RBP5.21□□□□□ -1.58
LIMS1-214ENST00000542845 CNOT6LQ96LI5 555 aaKnown RBP5.21□□□□□ -1.58
LIMS1-214ENST00000542845 TBC1D32Q96NH3 1257 aa5.21□□□□□ -1.58
LIMS1-214ENST00000542845 SEPT5Q99719 369 aaPredicted RBP5.21□□□□□ -1.58
LIMS1-214ENST00000542845 LPIN3Q9BQK8 851 aa5.21□□□□□ -1.58
LIMS1-214ENST00000542845 FAM83CQ9BQN1 747 aa5.21□□□□□ -1.58
LIMS1-214ENST00000542845 MTA3Q9BTC8 594 aa5.21□□□□□ -1.58
LIMS1-214ENST00000542845 DNAJC25Q9H1X3 360 aa5.21□□□□□ -1.58
LIMS1-214ENST00000542845 CRISPLD1Q9H336 500 aa5.21□□□□□ -1.58
LIMS1-214ENST00000542845 ECT2Q9H8V3 914 aa5.21□□□□□ -1.58
LIMS1-214ENST00000542845 GPRC5CQ9NQ84 441 aa5.21□□□□□ -1.58
LIMS1-214ENST00000542845 IGSF5Q9NSI5 407 aa5.21□□□□□ -1.58
LIMS1-214ENST00000542845 TDP1Q9NUW8 608 aa5.21□□□□□ -1.58
LIMS1-214ENST00000542845 DUS2Q9NX74 493 aaKnown RBP5.21□□□□□ -1.58
LIMS1-214ENST00000542845 VPS54Q9P1Q0 977 aa5.21□□□□□ -1.58
LIMS1-214ENST00000542845 DDX25Q9UHL0 483 aaKnown RBP5.21□□□□□ -1.58
LIMS1-214ENST00000542845 MAGED2Q9UNF1 606 aaPredicted RBP5.21□□□□□ -1.58
LIMS1-214ENST00000542845 CACNA1EQ15878 2313 aa5.21□□□□□ -1.58
LIMS1-214ENST00000542845 MUC22E2RYF6 1773 aaPredicted RBP5.21□□□□□ -1.58
LIMS1-214ENST00000542845 FREM2Q5SZK8 3169 aa5.2□□□□□ -1.58
LIMS1-214ENST00000542845 TCRBV21S2A2A0A5A6 115 aa5.2□□□□□ -1.58
LIMS1-214ENST00000542845 ESYT2A0FGR8 921 aa5.2□□□□□ -1.58
LIMS1-214ENST00000542845 ANKRD33BA6NCL7 494 aa5.2□□□□□ -1.58
LIMS1-214ENST00000542845 CAPN8A6NHC0 703 aa5.2□□□□□ -1.58
LIMS1-214ENST00000542845 K7EQS6 105 aa5.2□□□□□ -1.58
LIMS1-214ENST00000542845 SYN3O14994 580 aa5.2□□□□□ -1.58
LIMS1-214ENST00000542845 USO1O60763 962 aaKnown RBP5.2□□□□□ -1.58
LIMS1-214ENST00000542845 VNN2O95498 520 aa5.2□□□□□ -1.58
LIMS1-214ENST00000542845 FGF19O95750 216 aa5.2□□□□□ -1.58
LIMS1-214ENST00000542845 HLA-EP13747 358 aa5.2□□□□□ -1.58
LIMS1-214ENST00000542845 HNRNPLP14866 589 aaKnown RBP eCLIP5.2□□□□□ -1.58
LIMS1-214ENST00000542845 CHMLP26374 656 aa5.2□□□□□ -1.58
LIMS1-214ENST00000542845 MAOBP27338 520 aa5.2□□□□□ -1.58
LIMS1-214ENST00000542845 CDC25CP30307 473 aa5.2□□□□□ -1.58
LIMS1-214ENST00000542845 NMT1P30419 496 aaKnown RBP5.2□□□□□ -1.58
LIMS1-214ENST00000542845 HSPA4P34932 840 aa5.2□□□□□ -1.58
LIMS1-214ENST00000542845 ARL2P36404 184 aa5.2□□□□□ -1.58
LIMS1-214ENST00000542845 IFNAR2P48551 515 aa5.2□□□□□ -1.58
LIMS1-214ENST00000542845 YWHAHQ04917 246 aaPredicted RBP5.2□□□□□ -1.58
LIMS1-214ENST00000542845 CCDC173Q0VFZ6 552 aa5.2□□□□□ -1.58
LIMS1-214ENST00000542845 USP4Q13107 963 aa5.2□□□□□ -1.58
LIMS1-214ENST00000542845 SLC14A1Q13336 389 aa5.2□□□□□ -1.58
LIMS1-214ENST00000542845 BYSLQ13895 437 aaKnown RBP5.2□□□□□ -1.58
LIMS1-214ENST00000542845 MRPL58Q14197 206 aaKnown RBP5.2□□□□□ -1.58
LIMS1-214ENST00000542845 EPHA7Q15375 998 aa5.2□□□□□ -1.58
LIMS1-214ENST00000542845 CRY1Q16526 586 aa5.2□□□□□ -1.58
LIMS1-214ENST00000542845 EMC10Q5UCC4 262 aa5.2□□□□□ -1.58
LIMS1-214ENST00000542845 TXNDC8Q6A555 127 aa5.2□□□□□ -1.58
LIMS1-214ENST00000542845 B3GNT9Q6UX72 402 aa5.2□□□□□ -1.58
LIMS1-214ENST00000542845 PRICKLE2Q7Z3G6 844 aa5.2□□□□□ -1.58
LIMS1-214ENST00000542845 KRT25Q7Z3Z0 450 aa5.2□□□□□ -1.58
LIMS1-214ENST00000542845 USP37Q86T82 979 aa5.2□□□□□ -1.58
LIMS1-214ENST00000542845 ITIH5Q86UX2 942 aa5.2□□□□□ -1.58
LIMS1-214ENST00000542845 SGMS1Q86VZ5 419 aa5.2□□□□□ -1.58
LIMS1-214ENST00000542845 RASSF3Q86WH2 238 aa5.2□□□□□ -1.58
LIMS1-214ENST00000542845 C4orf19Q8IY42 314 aa5.2□□□□□ -1.58
LIMS1-214ENST00000542845 TMEM130Q8N3G9 435 aa5.2□□□□□ -1.58
LIMS1-214ENST00000542845 GALNT15Q8N3T1 639 aa5.2□□□□□ -1.58
LIMS1-214ENST00000542845 ZNF511Q8NB15 262 aa5.2□□□□□ -1.58
LIMS1-214ENST00000542845 TXNDC5Q8NBS9 432 aaKnown RBP5.2□□□□□ -1.58
LIMS1-214ENST00000542845 ATAD1Q8NBU5 361 aa5.2□□□□□ -1.58
LIMS1-214ENST00000542845 APPL2Q8NEU8 664 aa5.2□□□□□ -1.58
LIMS1-214ENST00000542845 OLIG1Q8TAK6 271 aa5.2□□□□□ -1.58
LIMS1-214ENST00000542845 ETNPPLQ8TBG4 499 aa5.2□□□□□ -1.58
LIMS1-214ENST00000542845 PIGOQ8TEQ8 1089 aa5.2□□□□□ -1.58
LIMS1-214ENST00000542845 WHAMMQ8TF30 809 aa5.2□□□□□ -1.58
LIMS1-214ENST00000542845 USP13Q92995 863 aaPredicted RBP5.2□□□□□ -1.58
LIMS1-214ENST00000542845 PSMG2Q969U7 264 aa5.2□□□□□ -1.58
LIMS1-214ENST00000542845 C18orf25Q96B23 403 aaPredicted RBP5.2□□□□□ -1.58
LIMS1-214ENST00000542845 TRIM4Q9C037 500 aa5.2□□□□□ -1.58
LIMS1-214ENST00000542845 OSBPL3Q9H4L5 887 aa5.2□□□□□ -1.58
LIMS1-214ENST00000542845 ZSWIM4Q9H7M6 989 aa5.2□□□□□ -1.58
LIMS1-214ENST00000542845 IL21RQ9HBE5 538 aa5.2□□□□□ -1.58
LIMS1-214ENST00000542845 CAPN10Q9HC96 672 aa5.2□□□□□ -1.58
LIMS1-214ENST00000542845 POLD4Q9HCU8 107 aa5.2□□□□□ -1.58
LIMS1-214ENST00000542845 TRPC7Q9HCX4 862 aa5.2□□□□□ -1.58
LIMS1-214ENST00000542845 DKK4Q9UBT3 224 aa5.2□□□□□ -1.58
LIMS1-214ENST00000542845 PCOLCE2Q9UKZ9 415 aa5.2□□□□□ -1.58
LIMS1-214ENST00000542845 MMP17Q9ULZ9 603 aa5.2□□□□□ -1.58
LIMS1-214ENST00000542845 TBX20Q9UMR3 447 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms