RNA–Protein interactions for RNA: ENST00000542452.1

C2CD3-217, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 956 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-217ENST00000542452 LEMD2Q8NC56 503 aa12.31□□□□□ -0.44
C2CD3-217ENST00000542452 OR6B3Q8NGW1 331 aa12.31□□□□□ -0.44
C2CD3-217ENST00000542452 PCED1BQ96HM7 432 aa12.31□□□□□ -0.44
C2CD3-217ENST00000542452 ASB16Q96NS5 453 aa12.31□□□□□ -0.44
C2CD3-217ENST00000542452 TWNKQ96RR1 684 aa12.31□□□□□ -0.44
C2CD3-217ENST00000542452 TMEM8AQ9HCN3 771 aa12.31□□□□□ -0.44
C2CD3-217ENST00000542452 ABCB6Q9NP58 842 aa12.31□□□□□ -0.44
C2CD3-217ENST00000542452 GDE1Q9NZC3 331 aa12.31□□□□□ -0.44
C2CD3-217ENST00000542452 HOOK1Q9UJC3 728 aaKnown RBP12.31□□□□□ -0.44
C2CD3-217ENST00000542452 ASB3Q9Y575 518 aa12.31□□□□□ -0.44
C2CD3-217ENST00000542452 MUC6Q6W4X9 2439 aa12.31□□□□□ -0.44
C2CD3-217ENST00000542452 ZNF197O14709 1029 aa12.3□□□□□ -0.44
C2CD3-217ENST00000542452 PSMA7O14818 248 aa12.3□□□□□ -0.44
C2CD3-217ENST00000542452 ECI2O75521 394 aa12.3□□□□□ -0.44
C2CD3-217ENST00000542452 NOL4O94818 638 aa12.3□□□□□ -0.44
C2CD3-217ENST00000542452 EPB41P11171 864 aaKnown RBP12.3□□□□□ -0.44
C2CD3-217ENST00000542452 KRT13P13646 458 aa12.3□□□□□ -0.44
C2CD3-217ENST00000542452 NPR3P17342 541 aa12.3□□□□□ -0.44
C2CD3-217ENST00000542452 GNL1P36915 607 aaPredicted RBP12.3□□□□□ -0.44
C2CD3-217ENST00000542452 MXI1P50539 228 aa12.3□□□□□ -0.44
C2CD3-217ENST00000542452 STX17P56962 302 aa12.3□□□□□ -0.44
C2CD3-217ENST00000542452 NOP14P78316 857 aaKnown RBP12.3□□□□□ -0.44
C2CD3-217ENST00000542452 GPC5P78333 572 aa12.3□□□□□ -0.44
C2CD3-217ENST00000542452 LRRC63Q05C16 580 aa12.3□□□□□ -0.44
C2CD3-217ENST00000542452 MTSS1LQ765P7 747 aa12.3□□□□□ -0.44
C2CD3-217ENST00000542452 ITIH5Q86UX2 942 aa12.3□□□□□ -0.44
C2CD3-217ENST00000542452 SPATA2LQ8IUW3 424 aaPredicted RBP12.3□□□□□ -0.44
C2CD3-217ENST00000542452 ZSCAN18Q8TBC5 510 aaPredicted RBP12.3□□□□□ -0.44
C2CD3-217ENST00000542452 MYCBPAPQ8TBZ2 947 aa12.3□□□□□ -0.44
C2CD3-217ENST00000542452 FAM200AQ8TCP9 573 aa12.3□□□□□ -0.44
C2CD3-217ENST00000542452 NELFBQ8WX92 580 aa12.3□□□□□ -0.44
C2CD3-217ENST00000542452 NXPE3Q969Y0 559 aa12.3□□□□□ -0.44
C2CD3-217ENST00000542452 PBXIP1Q96AQ6 731 aa12.3□□□□□ -0.44
C2CD3-217ENST00000542452 DHTKD1Q96HY7 919 aaPredicted RBP12.3□□□□□ -0.44
C2CD3-217ENST00000542452 FUBP3Q96I24 572 aaKnown RBP eCLIP12.3□□□□□ -0.44
C2CD3-217ENST00000542452 MED15Q96RN5 788 aa12.3□□□□□ -0.44
C2CD3-217ENST00000542452 TSG101Q99816 390 aa12.3□□□□□ -0.44
C2CD3-217ENST00000542452 BCO2Q9BYV7 579 aa12.3□□□□□ -0.44
C2CD3-217ENST00000542452 ZNF518BQ9C0D4 1074 aa12.3□□□□□ -0.44
C2CD3-217ENST00000542452 SNX25Q9H3E2 840 aa12.3□□□□□ -0.44
C2CD3-217ENST00000542452 CLSTN2Q9H4D0 955 aa12.3□□□□□ -0.44
C2CD3-217ENST00000542452 SLC2A4RGQ9NR83 387 aa12.3□□□□□ -0.44
C2CD3-217ENST00000542452 LMBRD1Q9NUN5 540 aa12.3□□□□□ -0.44
C2CD3-217ENST00000542452 CA14Q9ULX7 337 aa12.3□□□□□ -0.44
C2CD3-217ENST00000542452 MIA3Q5JRA6 1907 aa12.29□□□□□ -0.44
C2CD3-217ENST00000542452 MYH10P35580 1976 aa12.29□□□□□ -0.44
C2CD3-217ENST00000542452 SLC38A8A6NNN8 435 aa12.29□□□□□ -0.44
C2CD3-217ENST00000542452 A8MXQ7 604 aa12.29□□□□□ -0.44
C2CD3-217ENST00000542452 CLDN5O00501 218 aa12.29□□□□□ -0.44
C2CD3-217ENST00000542452 CLSTN1O94985 981 aa12.29□□□□□ -0.44
C2CD3-217ENST00000542452 PRAMEF12O95522 483 aa12.29□□□□□ -0.44
C2CD3-217ENST00000542452 F11P03951 625 aa12.29□□□□□ -0.44
C2CD3-217ENST00000542452 FAM163BP0C2L3 166 aa12.29□□□□□ -0.44
C2CD3-217ENST00000542452 PTPN1P18031 435 aaKnown RBP12.29□□□□□ -0.44
C2CD3-217ENST00000542452 BDNFP23560 247 aa12.29□□□□□ -0.44
C2CD3-217ENST00000542452 VIPR2P41587 438 aa12.29□□□□□ -0.44
C2CD3-217ENST00000542452 MAGEA11P43364 429 aa12.29□□□□□ -0.44
C2CD3-217ENST00000542452 USP46P62068 366 aa12.29□□□□□ -0.44
C2CD3-217ENST00000542452 FKBP3Q00688 224 aaKnown RBP12.29□□□□□ -0.44
C2CD3-217ENST00000542452 CYP27A1Q02318 531 aa12.29□□□□□ -0.44
C2CD3-217ENST00000542452 GRM2Q14416 872 aa12.29□□□□□ -0.44
C2CD3-217ENST00000542452 VEPH1Q14D04 833 aa12.29□□□□□ -0.44
C2CD3-217ENST00000542452 SGSM1Q2NKQ1 1148 aa12.29□□□□□ -0.44
C2CD3-217ENST00000542452 DCAF17Q5H9S7 520 aaPredicted RBP12.29□□□□□ -0.44
C2CD3-217ENST00000542452 KRT39Q6A163 491 aa12.29□□□□□ -0.44
C2CD3-217ENST00000542452 VITQ6UXI7 678 aa12.29□□□□□ -0.44
C2CD3-217ENST00000542452 PAQR9Q6ZVX9 377 aa12.29□□□□□ -0.44
C2CD3-217ENST00000542452 GPIHBP1Q8IV16 184 aa12.29□□□□□ -0.44
C2CD3-217ENST00000542452 SCN4BQ8IWT1 228 aa12.29□□□□□ -0.44
C2CD3-217ENST00000542452 FBXL6Q8N531 539 aa12.29□□□□□ -0.44
C2CD3-217ENST00000542452 B3GALNT2Q8NCR0 500 aa12.29□□□□□ -0.44
C2CD3-217ENST00000542452 TAF4BQ92750 862 aa12.29□□□□□ -0.44
C2CD3-217ENST00000542452 SMARCD2Q92925 531 aa12.29□□□□□ -0.44
C2CD3-217ENST00000542452 SLC35C1Q96A29 364 aa12.29□□□□□ -0.44
C2CD3-217ENST00000542452 B3GNT5Q9BYG0 378 aa12.29□□□□□ -0.44
C2CD3-217ENST00000542452 ATXN3LQ9H3M9 355 aa12.29□□□□□ -0.44
C2CD3-217ENST00000542452 KIAA1468Q9P260 1216 aa12.29□□□□□ -0.44
C2CD3-217ENST00000542452 SHISA7A6NL88 538 aa12.28□□□□□ -0.44
C2CD3-217ENST00000542452 GTF2H1P32780 548 aa12.28□□□□□ -0.44
C2CD3-217ENST00000542452 NDST1P52848 882 aa12.28□□□□□ -0.44
C2CD3-217ENST00000542452 NLRP12P59046 1061 aa12.28□□□□□ -0.44
C2CD3-217ENST00000542452 INCA1Q0VD86 236 aa12.28□□□□□ -0.44
C2CD3-217ENST00000542452 STIM1Q13586 685 aa12.28□□□□□ -0.44
C2CD3-217ENST00000542452 GPR158Q5T848 1215 aa12.28□□□□□ -0.44
C2CD3-217ENST00000542452 C4orf50Q6ZRC1 276 aa12.28□□□□□ -0.44
C2CD3-217ENST00000542452 FAM35AQ86V20 835 aa12.28□□□□□ -0.44
C2CD3-217ENST00000542452 SIX5Q8N196 739 aa12.28□□□□□ -0.44
C2CD3-217ENST00000542452 TMEM105Q8N8V8 129 aa12.28□□□□□ -0.44
C2CD3-217ENST00000542452 RIN3Q8TB24 985 aa12.28□□□□□ -0.44
C2CD3-217ENST00000542452 WHAMMQ8TF30 809 aa12.28□□□□□ -0.44
C2CD3-217ENST00000542452 ELSPBP1Q96BH3 223 aa12.28□□□□□ -0.44
C2CD3-217ENST00000542452 IPO9Q96P70 1041 aaKnown RBP12.28□□□□□ -0.44
C2CD3-217ENST00000542452 LRRC3BQ96PB8 259 aa12.28□□□□□ -0.44
C2CD3-217ENST00000542452 ARID3AQ99856 593 aa12.28□□□□□ -0.44
C2CD3-217ENST00000542452 GTPBP4Q9BZE4 634 aaKnown RBP12.28□□□□□ -0.44
C2CD3-217ENST00000542452 NIF3L1Q9GZT8 377 aa12.28□□□□□ -0.44
C2CD3-217ENST00000542452 SMG9Q9H0W8 520 aaKnown RBP12.28□□□□□ -0.44
C2CD3-217ENST00000542452 TRPV4Q9HBA0 871 aa12.28□□□□□ -0.44
C2CD3-217ENST00000542452 MAGEC2Q9UBF1 373 aaPredicted RBP12.28□□□□□ -0.44
C2CD3-217ENST00000542452 MAGED2Q9UNF1 606 aaPredicted RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms