RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 THNSL1Q8IYQ7 743 aa6□□□□□ -1.45
DDB1-219ENST00000541513 LZTR1Q8N653 840 aa6□□□□□ -1.45
DDB1-219ENST00000541513 GOLGA6L1Q8N7Z2 621 aa6□□□□□ -1.45
DDB1-219ENST00000541513 GLIS1Q8NBF1 620 aa6□□□□□ -1.45
DDB1-219ENST00000541513 AGBL5Q8NDL9 886 aa6□□□□□ -1.45
DDB1-219ENST00000541513 UTP15Q8TED0 518 aaKnown RBP6□□□□□ -1.45
DDB1-219ENST00000541513 PIGOQ8TEQ8 1089 aa6□□□□□ -1.45
DDB1-219ENST00000541513 SLC16A10Q8TF71 515 aa6□□□□□ -1.45
DDB1-219ENST00000541513 KBTBD7Q8WVZ9 684 aa6□□□□□ -1.45
DDB1-219ENST00000541513 SAMD11Q96NU1 681 aa6□□□□□ -1.45
DDB1-219ENST00000541513 FCRL3Q96P31 734 aaPredicted RBP6□□□□□ -1.45
DDB1-219ENST00000541513 FANCD2OSQ96PS1 177 aa6□□□□□ -1.45
DDB1-219ENST00000541513 UIMC1Q96RL1 719 aa6□□□□□ -1.45
DDB1-219ENST00000541513 PAIP2Q9BPZ3 127 aaKnown RBP6□□□□□ -1.45
DDB1-219ENST00000541513 TRIM6Q9C030 488 aaPredicted RBP6□□□□□ -1.45
DDB1-219ENST00000541513 DNAI2Q9GZS0 605 aa6□□□□□ -1.45
DDB1-219ENST00000541513 ADAM7Q9H2U9 754 aa6□□□□□ -1.45
DDB1-219ENST00000541513 ATXN3LQ9H3M9 355 aa6□□□□□ -1.45
DDB1-219ENST00000541513 CHST7Q9NS84 486 aa6□□□□□ -1.45
DDB1-219ENST00000541513 INTS10Q9NVR2 710 aaKnown RBP6□□□□□ -1.45
DDB1-219ENST00000541513 ADPRHL2Q9NX46 363 aa6□□□□□ -1.45
DDB1-219ENST00000541513 NXF1Q9UBU9 619 aaKnown RBP6□□□□□ -1.45
DDB1-219ENST00000541513 ATXN7L1Q9ULK2 861 aaPredicted RBP6□□□□□ -1.45
DDB1-219ENST00000541513 RGPD3A6NKT7 1758 aaPredicted RBP6□□□□□ -1.45
DDB1-219ENST00000541513 RGPD4Q7Z3J3 1758 aa6□□□□□ -1.45
DDB1-219ENST00000541513 TNS1Q9HBL0 1735 aaKnown RBP5.99□□□□□ -1.45
DDB1-219ENST00000541513 BTAF1O14981 1849 aa5.99□□□□□ -1.45
DDB1-219ENST00000541513 TRIM43BA6NCK2 446 aa5.99□□□□□ -1.45
DDB1-219ENST00000541513 H3BNC9 293 aa5.99□□□□□ -1.45
DDB1-219ENST00000541513 H3BUI4 141 aa5.99□□□□□ -1.45
DDB1-219ENST00000541513 DDX39AO00148 427 aaKnown RBP5.99□□□□□ -1.45
DDB1-219ENST00000541513 TM4SF5O14894 197 aa5.99□□□□□ -1.45
DDB1-219ENST00000541513 PIP5K1BO14986 540 aa5.99□□□□□ -1.45
DDB1-219ENST00000541513 IPO8O15397 1037 aaKnown RBP5.99□□□□□ -1.45
DDB1-219ENST00000541513 CYP27B1O15528 508 aa5.99□□□□□ -1.45
DDB1-219ENST00000541513 ASNA1O43681 348 aa5.99□□□□□ -1.45
DDB1-219ENST00000541513 MYO1BO43795 1136 aa5.99□□□□□ -1.45
DDB1-219ENST00000541513 GJB3O75712 270 aa5.99□□□□□ -1.45
DDB1-219ENST00000541513 PRKCBP05771 671 aa5.99□□□□□ -1.45
DDB1-219ENST00000541513 BMP2P12643 396 aa5.99□□□□□ -1.45
DDB1-219ENST00000541513 IFNGR1P15260 489 aa5.99□□□□□ -1.45
DDB1-219ENST00000541513 PRKAR2BP31323 418 aa5.99□□□□□ -1.45
DDB1-219ENST00000541513 PSMB10P40306 273 aa5.99□□□□□ -1.45
DDB1-219ENST00000541513 ETV3P41162 512 aa5.99□□□□□ -1.45
DDB1-219ENST00000541513 CTSKP43235 329 aa5.99□□□□□ -1.45
DDB1-219ENST00000541513 AARSP49588 968 aaKnown RBP eCLIP5.99□□□□□ -1.45
DDB1-219ENST00000541513 CTCFP49711 727 aaPredicted RBP5.99□□□□□ -1.45
DDB1-219ENST00000541513 ZNF41P51814 821 aaPredicted RBP5.99□□□□□ -1.45
DDB1-219ENST00000541513 RCAN1P53805 252 aa5.99□□□□□ -1.45
DDB1-219ENST00000541513 LGALS4P56470 323 aa5.99□□□□□ -1.45
DDB1-219ENST00000541513 RPS16P62249 146 aaKnown RBP5.99□□□□□ -1.45
DDB1-219ENST00000541513 SATB1Q01826 763 aa5.99□□□□□ -1.45
DDB1-219ENST00000541513 TUSC3Q13454 348 aa5.99□□□□□ -1.45
DDB1-219ENST00000541513 TRIM25Q14258 630 aaKnown RBP5.99□□□□□ -1.45
DDB1-219ENST00000541513 SF3B3Q15393 1217 aaKnown RBP5.99□□□□□ -1.45
DDB1-219ENST00000541513 INF2Q27J81 1249 aa5.99□□□□□ -1.45
DDB1-219ENST00000541513 WSCD2Q2TBF2 565 aa5.99□□□□□ -1.45
DDB1-219ENST00000541513 TCP11X2Q5H9J9 407 aa5.99□□□□□ -1.45
DDB1-219ENST00000541513 ATPAF1Q5TC12 328 aaPredicted RBP5.99□□□□□ -1.45
DDB1-219ENST00000541513 CWF19L1Q69YN2 538 aaKnown RBP5.99□□□□□ -1.45
DDB1-219ENST00000541513 MFSD5Q6N075 450 aa5.99□□□□□ -1.45
DDB1-219ENST00000541513 ZNF530Q6P9A1 599 aaPredicted RBP5.99□□□□□ -1.45
DDB1-219ENST00000541513 DCLRE1AQ6PJP8 1040 aa5.99□□□□□ -1.45
DDB1-219ENST00000541513 CRTC1Q6UUV9 634 aa5.99□□□□□ -1.45
DDB1-219ENST00000541513 CCBE1Q6UXH8 406 aaPredicted RBP5.99□□□□□ -1.45
DDB1-219ENST00000541513 HEATR3Q7Z4Q2 680 aa5.99□□□□□ -1.45
DDB1-219ENST00000541513 USP38Q8NB14 1042 aa5.99□□□□□ -1.45
DDB1-219ENST00000541513 ZNF540Q8NDQ6 660 aa5.99□□□□□ -1.45
DDB1-219ENST00000541513 OR6Y1Q8NGX8 325 aa5.99□□□□□ -1.45
DDB1-219ENST00000541513 PPP1R14CQ8TAE6 165 aa5.99□□□□□ -1.45
DDB1-219ENST00000541513 GSDMBQ8TAX9 411 aa5.99□□□□□ -1.45
DDB1-219ENST00000541513 SH3RF3Q8TEJ3 882 aaPredicted RBP5.99□□□□□ -1.45
DDB1-219ENST00000541513 IRF7Q92985 503 aa5.99□□□□□ -1.45
DDB1-219ENST00000541513 PTP4A1Q93096 173 aa5.99□□□□□ -1.45
DDB1-219ENST00000541513 TRIM43Q96BQ3 446 aaPredicted RBP5.99□□□□□ -1.45
DDB1-219ENST00000541513 CALML4Q96GE6 196 aa5.99□□□□□ -1.45
DDB1-219ENST00000541513 FAM210AQ96ND0 272 aa5.99□□□□□ -1.45
DDB1-219ENST00000541513 NOX5Q96PH1 765 aa5.99□□□□□ -1.45
DDB1-219ENST00000541513 FNBP1Q96RU3 617 aa5.99□□□□□ -1.45
DDB1-219ENST00000541513 PLEKHF1Q96S99 279 aa5.99□□□□□ -1.45
DDB1-219ENST00000541513 NUCKS1Q9H1E3 243 aaKnown RBP5.99□□□□□ -1.45
DDB1-219ENST00000541513 ABHD16BQ9H3Z7 469 aa5.99□□□□□ -1.45
DDB1-219ENST00000541513 INCENPQ9NQS7 918 aa5.99□□□□□ -1.45
DDB1-219ENST00000541513 PNPOQ9NVS9 261 aa5.99□□□□□ -1.45
DDB1-219ENST00000541513 RGL1Q9NZL6 768 aa5.99□□□□□ -1.45
DDB1-219ENST00000541513 RABL2AQ9UBK7 228 aaPredicted RBP5.99□□□□□ -1.45
DDB1-219ENST00000541513 CHORDC1Q9UHD1 332 aaPredicted RBP5.99□□□□□ -1.45
DDB1-219ENST00000541513 CTNNA3Q9UI47 895 aa5.99□□□□□ -1.45
DDB1-219ENST00000541513 FAM184BQ9ULE4 1060 aa5.99□□□□□ -1.45
DDB1-219ENST00000541513 ADAMTS8Q9UP79 889 aa5.99□□□□□ -1.45
DDB1-219ENST00000541513 SMG5Q9UPR3 1016 aaKnown RBP5.99□□□□□ -1.45
DDB1-219ENST00000541513 PAXBP1Q9Y5B6 917 aa5.99□□□□□ -1.45
DDB1-219ENST00000541513 MRC1P22897 1456 aa5.98□□□□□ -1.45
DDB1-219ENST00000541513 SENP3-EIF4A1A0A087X0R7 540 aa5.98□□□□□ -1.45
DDB1-219ENST00000541513 HMX3A6NHT5 357 aa5.98□□□□□ -1.45
DDB1-219ENST00000541513 A8MXE2 369 aa5.98□□□□□ -1.45
DDB1-219ENST00000541513 H7BY64 318 aa5.98□□□□□ -1.45
DDB1-219ENST00000541513 SCDO00767 359 aa5.98□□□□□ -1.45
DDB1-219ENST00000541513 KCNK3O14649 394 aa5.98□□□□□ -1.45
DDB1-219ENST00000541513 TBX10O75333 385 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms