RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 CCDC175P0C221 793 aa7.08□□□□□ -1.28
CLTCL1-206ENST00000540896 LRPAP1P30533 357 aa7.08□□□□□ -1.28
CLTCL1-206ENST00000540896 ASPAP45381 313 aa7.08□□□□□ -1.28
CLTCL1-206ENST00000540896 MAP2K3P46734 347 aa7.08□□□□□ -1.28
CLTCL1-206ENST00000540896 OR1G1P47890 313 aa7.08□□□□□ -1.28
CLTCL1-206ENST00000540896 GATMP50440 423 aa7.08□□□□□ -1.28
CLTCL1-206ENST00000540896 PDE6CP51160 858 aa7.08□□□□□ -1.28
CLTCL1-206ENST00000540896 CLCNKBP51801 687 aa7.08□□□□□ -1.28
CLTCL1-206ENST00000540896 KIF11P52732 1056 aa7.08□□□□□ -1.28
CLTCL1-206ENST00000540896 CDH8P55286 799 aa7.08□□□□□ -1.28
CLTCL1-206ENST00000540896 LILRA4P59901 499 aa7.08□□□□□ -1.28
CLTCL1-206ENST00000540896 WDR5P61964 334 aaKnown RBP7.08□□□□□ -1.28
CLTCL1-206ENST00000540896 KRT83P78385 493 aa7.08□□□□□ -1.28
CLTCL1-206ENST00000540896 MTF1Q14872 753 aa7.08□□□□□ -1.28
CLTCL1-206ENST00000540896 PAN2Q504Q3 1202 aaKnown RBP7.08□□□□□ -1.28
CLTCL1-206ENST00000540896 ZNF394Q53GI3 561 aa7.08□□□□□ -1.28
CLTCL1-206ENST00000540896 SPOUT1Q5T280 376 aaKnown RBP7.08□□□□□ -1.28
CLTCL1-206ENST00000540896 TAF3Q5VWG9 929 aa7.08□□□□□ -1.28
CLTCL1-206ENST00000540896 E4F1Q66K89 784 aaPredicted RBP7.08□□□□□ -1.28
CLTCL1-206ENST00000540896 FAM117BQ6P1L5 589 aa7.08□□□□□ -1.28
CLTCL1-206ENST00000540896 RAD9BQ6WBX8 426 aa7.08□□□□□ -1.28
CLTCL1-206ENST00000540896 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.08□□□□□ -1.28
CLTCL1-206ENST00000540896 DPH6Q7L8W6 267 aa7.08□□□□□ -1.28
CLTCL1-206ENST00000540896 SLC47A2Q86VL8 602 aa7.08□□□□□ -1.28
CLTCL1-206ENST00000540896 ZSCAN30Q86W11 494 aa7.08□□□□□ -1.28
CLTCL1-206ENST00000540896 METTL23Q86XA0 190 aa7.08□□□□□ -1.28
CLTCL1-206ENST00000540896 TMEM139Q8IV31 216 aa7.08□□□□□ -1.28
CLTCL1-206ENST00000540896 TTC39CQ8N584 583 aa7.08□□□□□ -1.28
CLTCL1-206ENST00000540896 RBBP8NLQ8NC74 664 aaPredicted RBP7.08□□□□□ -1.28
CLTCL1-206ENST00000540896 APPL2Q8NEU8 664 aa7.08□□□□□ -1.28
CLTCL1-206ENST00000540896 OR6B3Q8NGW1 331 aa7.08□□□□□ -1.28
CLTCL1-206ENST00000540896 CXorf38Q8TB03 319 aa7.08□□□□□ -1.28
CLTCL1-206ENST00000540896 FAXDC2Q96IV6 333 aa7.08□□□□□ -1.28
CLTCL1-206ENST00000540896 RNPC3Q96LT9 517 aaKnown RBP7.08□□□□□ -1.28
CLTCL1-206ENST00000540896 HEXIM2Q96MH2 286 aaKnown RBP7.08□□□□□ -1.28
CLTCL1-206ENST00000540896 AGPAT1Q99943 283 aa7.08□□□□□ -1.28
CLTCL1-206ENST00000540896 DESI2Q9BSY9 194 aa7.08□□□□□ -1.28
CLTCL1-206ENST00000540896 COLEC11Q9BWP8 271 aa7.08□□□□□ -1.28
CLTCL1-206ENST00000540896 MRPL9Q9BYD2 267 aaKnown RBP7.08□□□□□ -1.28
CLTCL1-206ENST00000540896 GPR88Q9GZN0 384 aa7.08□□□□□ -1.28
CLTCL1-206ENST00000540896 MTIF3Q9H2K0 278 aaKnown RBP7.08□□□□□ -1.28
CLTCL1-206ENST00000540896 VRTNQ9H8Y1 702 aa7.08□□□□□ -1.28
CLTCL1-206ENST00000540896 LUC7LQ9NQ29 371 aaKnown RBP7.08□□□□□ -1.28
CLTCL1-206ENST00000540896 TRMT1Q9NXH9 659 aaKnown RBP7.08□□□□□ -1.28
CLTCL1-206ENST00000540896 CXXC1Q9P0U4 656 aaPredicted RBP7.08□□□□□ -1.28
CLTCL1-206ENST00000540896 ARHGAP20Q9P2F6 1191 aa7.08□□□□□ -1.28
CLTCL1-206ENST00000540896 CACNG4Q9UBN1 327 aa7.08□□□□□ -1.28
CLTCL1-206ENST00000540896 ADAMTS1Q9UHI8 967 aa7.08□□□□□ -1.28
CLTCL1-206ENST00000540896 SLC4A7Q9Y6M7 1214 aa7.08□□□□□ -1.28
CLTCL1-206ENST00000540896 LOC100996750A0A140TA64 210 aa7.07□□□□□ -1.28
CLTCL1-206ENST00000540896 SSU72P8A0A1W2PR75 194 aa7.07□□□□□ -1.28
CLTCL1-206ENST00000540896 ARHGEF37A1IGU5 675 aa7.07□□□□□ -1.28
CLTCL1-206ENST00000540896 A8MXQ7 604 aa7.07□□□□□ -1.28
CLTCL1-206ENST00000540896 TMCO5BA8MYB1 307 aa7.07□□□□□ -1.28
CLTCL1-206ENST00000540896 INPPL1O15357 1258 aa7.07□□□□□ -1.28
CLTCL1-206ENST00000540896 THAP12O43422 761 aa7.07□□□□□ -1.28
CLTCL1-206ENST00000540896 TRAPPC3O43617 180 aa7.07□□□□□ -1.28
CLTCL1-206ENST00000540896 TADA2AO75478 443 aa7.07□□□□□ -1.28
CLTCL1-206ENST00000540896 DDHD2O94830 711 aa7.07□□□□□ -1.28
CLTCL1-206ENST00000540896 CD19P15391 556 aa7.07□□□□□ -1.28
CLTCL1-206ENST00000540896 CYP11B1P15538 503 aa7.07□□□□□ -1.28
CLTCL1-206ENST00000540896 ACO1P21399 889 aaKnown RBP7.07□□□□□ -1.28
CLTCL1-206ENST00000540896 PAX3P23760 479 aa7.07□□□□□ -1.28
CLTCL1-206ENST00000540896 ANXA13P27216 316 aa7.07□□□□□ -1.28
CLTCL1-206ENST00000540896 GNL1P36915 607 aaPredicted RBP7.07□□□□□ -1.28
CLTCL1-206ENST00000540896 PRKCIP41743 596 aa7.07□□□□□ -1.28
CLTCL1-206ENST00000540896 MAGEA1P43355 309 aa7.07□□□□□ -1.28
CLTCL1-206ENST00000540896 SCTRP47872 440 aa7.07□□□□□ -1.28
CLTCL1-206ENST00000540896 NDST1P52848 882 aa7.07□□□□□ -1.28
CLTCL1-206ENST00000540896 DEFB103AP81534 67 aa7.07□□□□□ -1.28
CLTCL1-206ENST00000540896 CYP27A1Q02318 531 aa7.07□□□□□ -1.28
CLTCL1-206ENST00000540896 GFPT1Q06210 699 aaPredicted RBP7.07□□□□□ -1.28
CLTCL1-206ENST00000540896 LBRQ14739 615 aaKnown RBP7.07□□□□□ -1.28
CLTCL1-206ENST00000540896 NAB2Q15742 525 aa7.07□□□□□ -1.28
CLTCL1-206ENST00000540896 UPP1Q16831 310 aa7.07□□□□□ -1.28
CLTCL1-206ENST00000540896 CCDC122Q5T0U0 273 aa7.07□□□□□ -1.28
CLTCL1-206ENST00000540896 RASIP1Q5U651 963 aa7.07□□□□□ -1.28
CLTCL1-206ENST00000540896 HGSNATQ68CP4 663 aa7.07□□□□□ -1.28
CLTCL1-206ENST00000540896 TOGARAM2Q6ZUX3 1019 aa7.07□□□□□ -1.28
CLTCL1-206ENST00000540896 ZNF571Q7Z3V5 609 aaPredicted RBP7.07□□□□□ -1.28
CLTCL1-206ENST00000540896 TMCO2Q7Z6W1 182 aaPredicted RBP7.07□□□□□ -1.28
CLTCL1-206ENST00000540896 KIAA1328Q86T90 577 aa7.07□□□□□ -1.28
CLTCL1-206ENST00000540896 NOP9Q86U38 636 aaKnown RBP7.07□□□□□ -1.28
CLTCL1-206ENST00000540896 ZNF280BQ86YH2 543 aa7.07□□□□□ -1.28
CLTCL1-206ENST00000540896 TDHQ8IZJ6 230 aa7.07□□□□□ -1.28
CLTCL1-206ENST00000540896 LRRC43Q8N309 656 aa7.07□□□□□ -1.28
CLTCL1-206ENST00000540896 TXLNBQ8N3L3 684 aa7.07□□□□□ -1.28
CLTCL1-206ENST00000540896 KIAA1524Q8TCG1 905 aa7.07□□□□□ -1.28
CLTCL1-206ENST00000540896 HASPINQ8TF76 798 aa7.07□□□□□ -1.28
CLTCL1-206ENST00000540896 RSPH1Q8WYR4 309 aa7.07□□□□□ -1.28
CLTCL1-206ENST00000540896 TOP1MTQ969P6 601 aa7.07□□□□□ -1.28
CLTCL1-206ENST00000540896 SENP8Q96LD8 212 aa7.07□□□□□ -1.28
CLTCL1-206ENST00000540896 CASD1Q96PB1 797 aa7.07□□□□□ -1.28
CLTCL1-206ENST00000540896 PAAF1Q9BRP4 392 aa7.07□□□□□ -1.28
CLTCL1-206ENST00000540896 NT5C1AQ9BXI3 368 aa7.07□□□□□ -1.28
CLTCL1-206ENST00000540896 KRTAP4-6Q9BYQ5 205 aa7.07□□□□□ -1.28
CLTCL1-206ENST00000540896 BCO2Q9BYV7 579 aa7.07□□□□□ -1.28
CLTCL1-206ENST00000540896 PRO3102Q9H379 93 aa7.07□□□□□ -1.28
CLTCL1-206ENST00000540896 SMYD3Q9H7B4 428 aa7.07□□□□□ -1.28
CLTCL1-206ENST00000540896 ACP6Q9NPH0 428 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms