RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 APOL6Q9BWW8 343 aa5.11□□□□□ -1.59
SNHG1-214ENST00000540865 LNPKQ9C0E8 428 aa5.11□□□□□ -1.59
SNHG1-214ENST00000540865 NRSN2Q9GZP1 204 aa5.11□□□□□ -1.59
SNHG1-214ENST00000540865 IL25Q9H293 177 aa5.11□□□□□ -1.59
SNHG1-214ENST00000540865 SOX17Q9H6I2 414 aaPredicted RBP5.11□□□□□ -1.59
SNHG1-214ENST00000540865 C8orf33Q9H7E9 229 aaPredicted RBP5.11□□□□□ -1.59
SNHG1-214ENST00000540865 MINDY3Q9H8M7 445 aa5.11□□□□□ -1.59
SNHG1-214ENST00000540865 TRPV4Q9HBA0 871 aa5.11□□□□□ -1.59
SNHG1-214ENST00000540865 HCFC1R1Q9NWW0 138 aa5.11□□□□□ -1.59
SNHG1-214ENST00000540865 MSRB2Q9Y3D2 182 aa5.11□□□□□ -1.59
SNHG1-214ENST00000540865 COL4A3BPQ9Y5P4 624 aa5.11□□□□□ -1.59
SNHG1-214ENST00000540865 SLC12A7Q9Y666 1083 aa5.11□□□□□ -1.59
SNHG1-214ENST00000540865 TAF6LQ9Y6J9 622 aa5.11□□□□□ -1.59
SNHG1-214ENST00000540865 ZMYM2Q9UBW7 1377 aa5.11□□□□□ -1.59
SNHG1-214ENST00000540865 SDK1Q7Z5N4 2213 aa5.11□□□□□ -1.59
SNHG1-214ENST00000540865 LOC100289279A0A1B0GTE1 492 aa5.1□□□□□ -1.59
SNHG1-214ENST00000540865 ARHGEF37A1IGU5 675 aa5.1□□□□□ -1.59
SNHG1-214ENST00000540865 C4orf47A7E2U8 309 aa5.1□□□□□ -1.59
SNHG1-214ENST00000540865 C9orf172C9J069 976 aa5.1□□□□□ -1.59
SNHG1-214ENST00000540865 F8W735 103 aaPredicted RBP5.1□□□□□ -1.59
SNHG1-214ENST00000540865 ARNTLO00327 626 aa5.1□□□□□ -1.59
SNHG1-214ENST00000540865 ZNF263O14978 683 aa5.1□□□□□ -1.59
SNHG1-214ENST00000540865 MSH4O15457 936 aa5.1□□□□□ -1.59
SNHG1-214ENST00000540865 ASAP2O43150 1006 aa5.1□□□□□ -1.59
SNHG1-214ENST00000540865 ADAM12O43184 909 aa5.1□□□□□ -1.59
SNHG1-214ENST00000540865 GAS7O60861 476 aa5.1□□□□□ -1.59
SNHG1-214ENST00000540865 RPP40O75818 363 aaKnown RBP5.1□□□□□ -1.59
SNHG1-214ENST00000540865 ERLIN2O94905 339 aa5.1□□□□□ -1.59
SNHG1-214ENST00000540865 TOP3BO95985 862 aaKnown RBP5.1□□□□□ -1.59
SNHG1-214ENST00000540865 CEBPBP17676 345 aa5.1□□□□□ -1.59
SNHG1-214ENST00000540865 PTPN2P17706 415 aa5.1□□□□□ -1.59
SNHG1-214ENST00000540865 NOS3P29474 1203 aa5.1□□□□□ -1.59
SNHG1-214ENST00000540865 OR1D2P34982 312 aa5.1□□□□□ -1.59
SNHG1-214ENST00000540865 PTH1RQ03431 593 aa5.1□□□□□ -1.59
SNHG1-214ENST00000540865 LAMTOR4Q0VGL1 99 aa5.1□□□□□ -1.59
SNHG1-214ENST00000540865 GRIK3Q13003 919 aa5.1□□□□□ -1.59
SNHG1-214ENST00000540865 MRPL58Q14197 206 aaKnown RBP5.1□□□□□ -1.59
SNHG1-214ENST00000540865 POU4F3Q15319 338 aa5.1□□□□□ -1.59
SNHG1-214ENST00000540865 PLK5Q496M5 336 aa5.1□□□□□ -1.59
SNHG1-214ENST00000540865 FAM171A1Q5VUB5 890 aa5.1□□□□□ -1.59
SNHG1-214ENST00000540865 NOTUMQ6P988 496 aa5.1□□□□□ -1.59
SNHG1-214ENST00000540865 VITQ6UXI7 678 aa5.1□□□□□ -1.59
SNHG1-214ENST00000540865 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.1□□□□□ -1.59
SNHG1-214ENST00000540865 SYNE3Q6ZMZ3 975 aa5.1□□□□□ -1.59
SNHG1-214ENST00000540865 Q6ZS52 159 aa5.1□□□□□ -1.59
SNHG1-214ENST00000540865 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.1□□□□□ -1.59
SNHG1-214ENST00000540865 MIER3Q7Z3K6 550 aa5.1□□□□□ -1.59
SNHG1-214ENST00000540865 PDZD3Q86UT5 571 aa5.1□□□□□ -1.59
SNHG1-214ENST00000540865 CEP57Q86XR8 500 aa5.1□□□□□ -1.59
SNHG1-214ENST00000540865 MFSD6LQ8IWD5 586 aa5.1□□□□□ -1.59
SNHG1-214ENST00000540865 GSTCDQ8NEC7 633 aa5.1□□□□□ -1.59
SNHG1-214ENST00000540865 PATJQ8NI35 1801 aa5.1□□□□□ -1.59
SNHG1-214ENST00000540865 EXOC6Q8TAG9 804 aa5.1□□□□□ -1.59
SNHG1-214ENST00000540865 CSGALNACT1Q8TDX6 532 aa5.1□□□□□ -1.59
SNHG1-214ENST00000540865 PRPF31Q8WWY3 499 aaKnown RBP5.1□□□□□ -1.59
SNHG1-214ENST00000540865 RUFY2Q8WXA3 655 aa5.1□□□□□ -1.59
SNHG1-214ENST00000540865 PSPC1Q8WXF1 523 aaKnown RBP5.1□□□□□ -1.59
SNHG1-214ENST00000540865 SLC5A5Q92911 643 aa5.1□□□□□ -1.59
SNHG1-214ENST00000540865 SMARCD2Q92925 531 aa5.1□□□□□ -1.59
SNHG1-214ENST00000540865 E2F7Q96AV8 911 aa5.1□□□□□ -1.59
SNHG1-214ENST00000540865 LENG9Q96B70 501 aa5.1□□□□□ -1.59
SNHG1-214ENST00000540865 TEKT3Q9BXF9 490 aa5.1□□□□□ -1.59
SNHG1-214ENST00000540865 EIF2AQ9BY44 585 aaKnown RBP5.1□□□□□ -1.59
SNHG1-214ENST00000540865 MRPL18Q9H0U6 180 aaKnown RBP5.1□□□□□ -1.59
SNHG1-214ENST00000540865 CSRNP2Q9H175 543 aa5.1□□□□□ -1.59
SNHG1-214ENST00000540865 UNC45AQ9H3U1 944 aa5.1□□□□□ -1.59
SNHG1-214ENST00000540865 SMOC1Q9H4F8 434 aa5.1□□□□□ -1.59
SNHG1-214ENST00000540865 RBM12Q9NTZ6 932 aaKnown RBP5.1□□□□□ -1.59
SNHG1-214ENST00000540865 RBM28Q9NW13 759 aaKnown RBP5.1□□□□□ -1.59
SNHG1-214ENST00000540865 HES2Q9Y543 173 aa5.1□□□□□ -1.59
SNHG1-214ENST00000540865 BACE2Q9Y5Z0 518 aa5.1□□□□□ -1.59
SNHG1-214ENST00000540865 MIA3Q5JRA6 1907 aa5.09□□□□□ -1.59
SNHG1-214ENST00000540865 ESYT2A0FGR8 921 aa5.09□□□□□ -1.59
SNHG1-214ENST00000540865 WDR27A2RRH5 827 aa5.09□□□□□ -1.59
SNHG1-214ENST00000540865 MYBPHLA2RUH7 354 aa5.09□□□□□ -1.59
SNHG1-214ENST00000540865 FAM221BA6H8Z2 402 aa5.09□□□□□ -1.59
SNHG1-214ENST00000540865 TMEM150BA6NC51 233 aa5.09□□□□□ -1.59
SNHG1-214ENST00000540865 H0Y626 953 aa5.09□□□□□ -1.59
SNHG1-214ENST00000540865 CHADO15335 359 aa5.09□□□□□ -1.59
SNHG1-214ENST00000540865 CHMP2AO43633 222 aa5.09□□□□□ -1.59
SNHG1-214ENST00000540865 TSPAN1O60635 241 aa5.09□□□□□ -1.59
SNHG1-214ENST00000540865 RHOBTB1O94844 696 aa5.09□□□□□ -1.59
SNHG1-214ENST00000540865 TRIM16O95361 564 aa5.09□□□□□ -1.59
SNHG1-214ENST00000540865 CAVIN2O95810 425 aa5.09□□□□□ -1.59
SNHG1-214ENST00000540865 LRG1P02750 347 aa5.09□□□□□ -1.59
SNHG1-214ENST00000540865 CAPNS1P04632 268 aa5.09□□□□□ -1.59
SNHG1-214ENST00000540865 SRGAP2CP0DJJ0 459 aa5.09□□□□□ -1.59
SNHG1-214ENST00000540865 CCDC192P0DO97 292 aa5.09□□□□□ -1.59
SNHG1-214ENST00000540865 KPNA1P52294 538 aaPredicted RBP5.09□□□□□ -1.59
SNHG1-214ENST00000540865 PPP2R3AQ06190 1150 aa5.09□□□□□ -1.59
SNHG1-214ENST00000540865 POU5F1BQ06416 359 aa5.09□□□□□ -1.59
SNHG1-214ENST00000540865 TUSC3Q13454 348 aa5.09□□□□□ -1.59
SNHG1-214ENST00000540865 ELF2Q15723 593 aa5.09□□□□□ -1.59
SNHG1-214ENST00000540865 CYP4A22Q5TCH4 519 aa5.09□□□□□ -1.59
SNHG1-214ENST00000540865 LRCH2Q5VUJ6 765 aa5.09□□□□□ -1.59
SNHG1-214ENST00000540865 TCEAL6Q6IPX3 200 aa5.09□□□□□ -1.59
SNHG1-214ENST00000540865 B3GNT9Q6UX72 402 aa5.09□□□□□ -1.59
SNHG1-214ENST00000540865 ANO5Q75V66 913 aa5.09□□□□□ -1.59
SNHG1-214ENST00000540865 PDZD4Q76G19 769 aaPredicted RBP5.09□□□□□ -1.59
SNHG1-214ENST00000540865 SGMS1Q86VZ5 419 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms