RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 SH2B1Q9NRF2 756 aaPredicted RBP7.88□□□□□ -1.15
YBX3-209ENST00000540747 ABI2Q9NYB9 513 aaPredicted RBP7.88□□□□□ -1.15
YBX3-209ENST00000540747 PCDHB5Q9Y5E4 795 aa7.88□□□□□ -1.15
YBX3-209ENST00000540747 LOC400499M0QZD8 3231 aa7.88□□□□□ -1.15
YBX3-209ENST00000540747 GON4LQ3T8J9 2241 aa7.88□□□□□ -1.15
YBX3-209ENST00000540747 PCNX2A6NKB5 2137 aa7.87□□□□□ -1.15
YBX3-209ENST00000540747 NUP205Q92621 2012 aa7.87□□□□□ -1.15
YBX3-209ENST00000540747 VWA3AA6NCI4 1184 aa7.87□□□□□ -1.15
YBX3-209ENST00000540747 ANTXRLA6NF34 631 aa7.87□□□□□ -1.15
YBX3-209ENST00000540747 C4orf47A7E2U8 309 aa7.87□□□□□ -1.15
YBX3-209ENST00000540747 KPNA7A9QM74 516 aa7.87□□□□□ -1.15
YBX3-209ENST00000540747 K7ENM7 598 aa7.87□□□□□ -1.15
YBX3-209ENST00000540747 TRAK2O60296 914 aa7.87□□□□□ -1.15
YBX3-209ENST00000540747 RHOBTB1O94844 696 aa7.87□□□□□ -1.15
YBX3-209ENST00000540747 CAVIN2O95810 425 aa7.87□□□□□ -1.15
YBX3-209ENST00000540747 CSH1P0DML2 217 aa7.87□□□□□ -1.15
YBX3-209ENST00000540747 CSH2P0DML3 217 aa7.87□□□□□ -1.15
YBX3-209ENST00000540747 HOXB3P14651 431 aaPredicted RBP7.87□□□□□ -1.15
YBX3-209ENST00000540747 HNRNPLP14866 589 aaKnown RBP eCLIP7.87□□□□□ -1.15
YBX3-209ENST00000540747 BCKDHBP21953 392 aa7.87□□□□□ -1.15
YBX3-209ENST00000540747 KCNA4P22459 653 aa7.87□□□□□ -1.15
YBX3-209ENST00000540747 ADSSP30520 456 aa7.87□□□□□ -1.15
YBX3-209ENST00000540747 OPRD1P41143 372 aa7.87□□□□□ -1.15
YBX3-209ENST00000540747 MATR3P43243 847 aaKnown RBP eCLIP7.87□□□□□ -1.15
YBX3-209ENST00000540747 ACOT2P49753 483 aa7.87□□□□□ -1.15
YBX3-209ENST00000540747 NOVA1P51513 510 aaKnown RBP7.87□□□□□ -1.15
YBX3-209ENST00000540747 ZXDBP98169 803 aa7.87□□□□□ -1.15
YBX3-209ENST00000540747 AMPD2Q01433 879 aa7.87□□□□□ -1.15
YBX3-209ENST00000540747 ZNF252P-AS1Q0IIN9 211 aa7.87□□□□□ -1.15
YBX3-209ENST00000540747 BFSP1Q12934 665 aa7.87□□□□□ -1.15
YBX3-209ENST00000540747 GNL2Q13823 731 aaKnown RBP7.87□□□□□ -1.15
YBX3-209ENST00000540747 ELF2Q15723 593 aa7.87□□□□□ -1.15
YBX3-209ENST00000540747 CCDC142Q17RM4 750 aa7.87□□□□□ -1.15
YBX3-209ENST00000540747 RILPL1Q5EBL4 403 aa7.87□□□□□ -1.15
YBX3-209ENST00000540747 SDHAF4Q5VUM1 108 aa7.87□□□□□ -1.15
YBX3-209ENST00000540747 GPBP1Q86WP2 473 aa7.87□□□□□ -1.15
YBX3-209ENST00000540747 METTL23Q86XA0 190 aa7.87□□□□□ -1.15
YBX3-209ENST00000540747 DCP1BQ8IZD4 617 aaKnown RBP7.87□□□□□ -1.15
YBX3-209ENST00000540747 PDCL2Q8N4E4 241 aa7.87□□□□□ -1.15
YBX3-209ENST00000540747 CPA6Q8N4T0 437 aa7.87□□□□□ -1.15
YBX3-209ENST00000540747 USP33Q8TEY7 942 aa7.87□□□□□ -1.15
YBX3-209ENST00000540747 MRPS31Q92665 395 aaKnown RBP7.87□□□□□ -1.15
YBX3-209ENST00000540747 CD101Q93033 1021 aa7.87□□□□□ -1.15
YBX3-209ENST00000540747 CNOT6LQ96LI5 555 aaKnown RBP7.87□□□□□ -1.15
YBX3-209ENST00000540747 AK8Q96MA6 479 aa7.87□□□□□ -1.15
YBX3-209ENST00000540747 IKZF4Q9H2S9 585 aa7.87□□□□□ -1.15
YBX3-209ENST00000540747 DPP3Q9NY33 737 aa7.87□□□□□ -1.15
YBX3-209ENST00000540747 ZMIZ1Q9ULJ6 1067 aa7.87□□□□□ -1.15
YBX3-209ENST00000540747 L1RE1Q9UN81 338 aa7.87□□□□□ -1.15
YBX3-209ENST00000540747 PTPRDP23468 1912 aa7.87□□□□□ -1.15
YBX3-209ENST00000540747 TMEM8BA6NDV4 472 aa7.86□□□□□ -1.15
YBX3-209ENST00000540747 K7EQS6 105 aa7.86□□□□□ -1.15
YBX3-209ENST00000540747 GABRDO14764 452 aa7.86□□□□□ -1.15
YBX3-209ENST00000540747 TOP3BO95985 862 aaKnown RBP7.86□□□□□ -1.15
YBX3-209ENST00000540747 CEACAM1P13688 526 aa7.86□□□□□ -1.15
YBX3-209ENST00000540747 CYP2F1P24903 491 aa7.86□□□□□ -1.15
YBX3-209ENST00000540747 ABCD1P33897 745 aa7.86□□□□□ -1.15
YBX3-209ENST00000540747 CREB5Q02930 508 aa7.86□□□□□ -1.15
YBX3-209ENST00000540747 MCM6Q14566 821 aa7.86□□□□□ -1.15
YBX3-209ENST00000540747 ZRSR1Q15695 479 aaKnown RBP7.86□□□□□ -1.15
YBX3-209ENST00000540747 NFE2Q16621 373 aaPredicted RBP7.86□□□□□ -1.15
YBX3-209ENST00000540747 DDR2Q16832 855 aa7.86□□□□□ -1.15
YBX3-209ENST00000540747 SV2CQ496J9 727 aa7.86□□□□□ -1.15
YBX3-209ENST00000540747 CFAP221Q4G0U5 840 aa7.86□□□□□ -1.15
YBX3-209ENST00000540747 ZC2HC1CQ53FD0 456 aaPredicted RBP7.86□□□□□ -1.15
YBX3-209ENST00000540747 INTS6LQ5JSJ4 861 aaKnown RBP7.86□□□□□ -1.15
YBX3-209ENST00000540747 SH3PXD2AQ5TCZ1 1133 aa7.86□□□□□ -1.15
YBX3-209ENST00000540747 PEAR1Q5VY43 1037 aaPredicted RBP7.86□□□□□ -1.15
YBX3-209ENST00000540747 C11orf74Q86VG3 221 aa7.86□□□□□ -1.15
YBX3-209ENST00000540747 OSTM1Q86WC4 334 aa7.86□□□□□ -1.15
YBX3-209ENST00000540747 NT5DC4Q86YG4 428 aa7.86□□□□□ -1.15
YBX3-209ENST00000540747 THEM5Q8N1Q8 247 aa7.86□□□□□ -1.15
YBX3-209ENST00000540747 MYCT1Q8N699 235 aa7.86□□□□□ -1.15
YBX3-209ENST00000540747 KIAA1958Q8N8K9 716 aa7.86□□□□□ -1.15
YBX3-209ENST00000540747 C1orf127Q8N9H9 656 aa7.86□□□□□ -1.15
YBX3-209ENST00000540747 FAM184AQ8NB25 1140 aa7.86□□□□□ -1.15
YBX3-209ENST00000540747 SPATA18Q8TC71 538 aa7.86□□□□□ -1.15
YBX3-209ENST00000540747 RAD54LQ92698 747 aa7.86□□□□□ -1.15
YBX3-209ENST00000540747 ATP2A3Q93084 1043 aa7.86□□□□□ -1.15
YBX3-209ENST00000540747 FAM212AQ96EL1 285 aa7.86□□□□□ -1.15
YBX3-209ENST00000540747 CYP2S1Q96SQ9 504 aa7.86□□□□□ -1.15
YBX3-209ENST00000540747 ACBD6Q9BR61 282 aa7.86□□□□□ -1.15
YBX3-209ENST00000540747 PI4K2AQ9BTU6 479 aa7.86□□□□□ -1.15
YBX3-209ENST00000540747 ADAM33Q9BZ11 813 aa7.86□□□□□ -1.15
YBX3-209ENST00000540747 DUS2Q9NX74 493 aaKnown RBP7.86□□□□□ -1.15
YBX3-209ENST00000540747 GDAP2Q9NXN4 497 aa7.86□□□□□ -1.15
YBX3-209ENST00000540747 UXTQ9UBK9 157 aaPredicted RBP7.86□□□□□ -1.15
YBX3-209ENST00000540747 EVLQ9UI08 416 aaPredicted RBP7.86□□□□□ -1.15
YBX3-209ENST00000540747 AGO2Q9UKV8 859 aaKnown RBP7.86□□□□□ -1.15
YBX3-209ENST00000540747 MMP17Q9ULZ9 603 aa7.86□□□□□ -1.15
YBX3-209ENST00000540747 ARHGAP26Q9UNA1 814 aa7.86□□□□□ -1.15
YBX3-209ENST00000540747 WNT6Q9Y6F9 365 aa7.86□□□□□ -1.15
YBX3-209ENST00000540747 GCN1Q92616 2671 aaKnown RBP7.86□□□□□ -1.15
YBX3-209ENST00000540747 ANAPC1Q9H1A4 1944 aa7.86□□□□□ -1.15
YBX3-209ENST00000540747 HELZ2Q9BYK8 2649 aaKnown RBP7.85□□□□□ -1.15
YBX3-209ENST00000540747 APC2O95996 2303 aa7.85□□□□□ -1.15
YBX3-209ENST00000540747 TNRC6BQ9UPQ9 1833 aaKnown RBP7.85□□□□□ -1.15
YBX3-209ENST00000540747 SETXQ7Z333 2677 aaKnown RBP7.85□□□□□ -1.15
YBX3-209ENST00000540747 C2orf78A6NCI8 922 aa7.85□□□□□ -1.15
YBX3-209ENST00000540747 PATE3B3GLJ2 98 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms