RNA–Protein interactions for RNA: ENST00000540057.1

C2CD3-214, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 4

Gene C2CD3, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-214ENST00000540057 TUBE1Q9UJT0 475 aa4.49□□□□□ -1.69
C2CD3-214ENST00000540057 RAB23Q9ULC3 237 aa4.49□□□□□ -1.69
C2CD3-214ENST00000540057 WASF3Q9UPY6 502 aa4.49□□□□□ -1.69
C2CD3-214ENST00000540057 KDM3AQ9Y4C1 1321 aa4.48□□□□□ -1.69
C2CD3-214ENST00000540057 GREB1Q4ZG55 1949 aa4.48□□□□□ -1.69
C2CD3-214ENST00000540057 LOC400499M0QZD8 3231 aa4.48□□□□□ -1.69
C2CD3-214ENST00000540057 ASH1LQ9NR48 2969 aaKnown RBP4.48□□□□□ -1.69
C2CD3-214ENST00000540057 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.48□□□□□ -1.69
C2CD3-214ENST00000540057 NT5C1B-RDH14C9J2C7 533 aa4.48□□□□□ -1.69
C2CD3-214ENST00000540057 ANHXE9PGG2 379 aa4.48□□□□□ -1.69
C2CD3-214ENST00000540057 M0QZ92 97 aa4.48□□□□□ -1.69
C2CD3-214ENST00000540057 FFAR3O14843 346 aa4.48□□□□□ -1.69
C2CD3-214ENST00000540057 RANBP6O60518 1105 aaKnown RBP4.48□□□□□ -1.69
C2CD3-214ENST00000540057 KCNK5O95279 499 aa4.48□□□□□ -1.69
C2CD3-214ENST00000540057 CYBBP04839 570 aa4.48□□□□□ -1.69
C2CD3-214ENST00000540057 CD3EP07766 207 aa4.48□□□□□ -1.69
C2CD3-214ENST00000540057 CTSAP10619 480 aa4.48□□□□□ -1.69
C2CD3-214ENST00000540057 TDGF1P13385 188 aa4.48□□□□□ -1.69
C2CD3-214ENST00000540057 MARK3P27448 753 aa4.48□□□□□ -1.69
C2CD3-214ENST00000540057 MAGEA9P43362 315 aa4.48□□□□□ -1.69
C2CD3-214ENST00000540057 LIMS1P48059 325 aa4.48□□□□□ -1.69
C2CD3-214ENST00000540057 METAP2P50579 478 aaKnown RBP eCLIP4.48□□□□□ -1.69
C2CD3-214ENST00000540057 LIMK1P53667 647 aa4.48□□□□□ -1.69
C2CD3-214ENST00000540057 CORO7P57737 925 aa4.48□□□□□ -1.69
C2CD3-214ENST00000540057 IGBP1P78318 339 aa4.48□□□□□ -1.69
C2CD3-214ENST00000540057 GPC5P78333 572 aa4.48□□□□□ -1.69
C2CD3-214ENST00000540057 FAM189BP81408 668 aa4.48□□□□□ -1.69
C2CD3-214ENST00000540057 SP4Q02446 784 aa4.48□□□□□ -1.69
C2CD3-214ENST00000540057 GHRHRQ02643 423 aa4.48□□□□□ -1.69
C2CD3-214ENST00000540057 PPFIA1Q13136 1202 aa4.48□□□□□ -1.69
C2CD3-214ENST00000540057 NEDD9Q14511 834 aa4.48□□□□□ -1.69
C2CD3-214ENST00000540057 NR1I3Q14994 352 aa4.48□□□□□ -1.69
C2CD3-214ENST00000540057 UBXN2BQ14CS0 331 aa4.48□□□□□ -1.69
C2CD3-214ENST00000540057 WTAPQ15007 396 aa4.48□□□□□ -1.69
C2CD3-214ENST00000540057 QRICH1Q2TAL8 776 aa4.48□□□□□ -1.69
C2CD3-214ENST00000540057 HSP90AB4PQ58FF6 505 aa4.48□□□□□ -1.69
C2CD3-214ENST00000540057 CCDC81Q6ZN84 652 aa4.48□□□□□ -1.69
C2CD3-214ENST00000540057 STOX1Q6ZVD7 989 aa4.48□□□□□ -1.69
C2CD3-214ENST00000540057 VPS52Q8N1B4 723 aa4.48□□□□□ -1.69
C2CD3-214ENST00000540057 CELF5Q8N6W0 485 aaKnown RBP4.48□□□□□ -1.69
C2CD3-214ENST00000540057 LINC01356Q8N9X3 169 aa4.48□□□□□ -1.69
C2CD3-214ENST00000540057 ST13P5Q8NFI4 369 aaPredicted RBP4.48□□□□□ -1.69
C2CD3-214ENST00000540057 CXorf38Q8TB03 319 aa4.48□□□□□ -1.69
C2CD3-214ENST00000540057 SHDQ96IW2 340 aa4.48□□□□□ -1.69
C2CD3-214ENST00000540057 PWWP2AQ96N64 755 aa4.48□□□□□ -1.69
C2CD3-214ENST00000540057 PTCHD1Q96NR3 888 aa4.48□□□□□ -1.69
C2CD3-214ENST00000540057 ADAM2Q99965 735 aa4.48□□□□□ -1.69
C2CD3-214ENST00000540057 MYL10Q9BUA6 226 aa4.48□□□□□ -1.69
C2CD3-214ENST00000540057 RPP25Q9BUL9 199 aaKnown RBP4.48□□□□□ -1.69
C2CD3-214ENST00000540057 CELF4Q9BZC1 486 aaKnown RBP4.48□□□□□ -1.69
C2CD3-214ENST00000540057 OSBPL6Q9BZF3 934 aa4.48□□□□□ -1.69
C2CD3-214ENST00000540057 NACAP1Q9BZK3 213 aa4.48□□□□□ -1.69
C2CD3-214ENST00000540057 TMEM117Q9H0C3 514 aa4.48□□□□□ -1.69
C2CD3-214ENST00000540057 NAPBQ9H115 298 aa4.48□□□□□ -1.69
C2CD3-214ENST00000540057 ZBP1Q9H171 429 aa4.48□□□□□ -1.69
C2CD3-214ENST00000540057 NOL6Q9H6R4 1146 aaKnown RBP4.48□□□□□ -1.69
C2CD3-214ENST00000540057 ELAC1Q9H777 363 aaKnown RBP4.48□□□□□ -1.69
C2CD3-214ENST00000540057 ATP6V0A4Q9HBG4 840 aa4.48□□□□□ -1.69
C2CD3-214ENST00000540057 WDR6Q9NNW5 1121 aaKnown RBP4.48□□□□□ -1.69
C2CD3-214ENST00000540057 LTB4R2Q9NPC1 389 aa4.48□□□□□ -1.69
C2CD3-214ENST00000540057 LUC7LQ9NQ29 371 aaKnown RBP4.48□□□□□ -1.69
C2CD3-214ENST00000540057 RXFP3Q9NSD7 469 aa4.48□□□□□ -1.69
C2CD3-214ENST00000540057 TMEM161AQ9NX61 479 aa4.48□□□□□ -1.69
C2CD3-214ENST00000540057 FBLN5Q9UBX5 448 aa4.48□□□□□ -1.69
C2CD3-214ENST00000540057 MRPL11Q9Y3B7 192 aaKnown RBP4.48□□□□□ -1.69
C2CD3-214ENST00000540057 NOC2LQ9Y3T9 749 aaKnown RBP4.48□□□□□ -1.69
C2CD3-214ENST00000540057 NUMBLQ9Y6R0 609 aa4.48□□□□□ -1.69
C2CD3-214ENST00000540057 NBEAQ8NFP9 2946 aa4.48□□□□□ -1.69
C2CD3-214ENST00000540057 CLUHO75153 1309 aa4.47□□□□□ -1.69
C2CD3-214ENST00000540057 CCDC195A0A1B0GUA6 201 aa4.47□□□□□ -1.69
C2CD3-214ENST00000540057 DENND3A2RUS2 1198 aa4.47□□□□□ -1.69
C2CD3-214ENST00000540057 FOXP2O15409 715 aa4.47□□□□□ -1.69
C2CD3-214ENST00000540057 RNF113AO15541 343 aaKnown RBP4.47□□□□□ -1.69
C2CD3-214ENST00000540057 TOP3BO95985 862 aaKnown RBP4.47□□□□□ -1.69
C2CD3-214ENST00000540057 PLA2G1BP04054 148 aaKnown RBP4.47□□□□□ -1.69
C2CD3-214ENST00000540057 RPLP2P05387 115 aaKnown RBP4.47□□□□□ -1.69
C2CD3-214ENST00000540057 LAMP2P13473 410 aa4.47□□□□□ -1.69
C2CD3-214ENST00000540057 ITGA4P13612 1032 aa4.47□□□□□ -1.69
C2CD3-214ENST00000540057 CD72P21854 359 aa4.47□□□□□ -1.69
C2CD3-214ENST00000540057 TACR1P25103 407 aa4.47□□□□□ -1.69
C2CD3-214ENST00000540057 CCND2P30279 289 aa4.47□□□□□ -1.69
C2CD3-214ENST00000540057 HOXA13P31271 388 aaPredicted RBP4.47□□□□□ -1.69
C2CD3-214ENST00000540057 TCF7P36402 384 aaPredicted RBP4.47□□□□□ -1.69
C2CD3-214ENST00000540057 RBM25P49756 843 aaKnown RBP4.47□□□□□ -1.69
C2CD3-214ENST00000540057 CLCN4P51793 760 aa4.47□□□□□ -1.69
C2CD3-214ENST00000540057 BCAR1P56945 870 aa4.47□□□□□ -1.69
C2CD3-214ENST00000540057 MRPS9P82933 396 aaKnown RBP4.47□□□□□ -1.69
C2CD3-214ENST00000540057 HTR4Q13639 388 aa4.47□□□□□ -1.69
C2CD3-214ENST00000540057 GIT2Q14161 759 aa4.47□□□□□ -1.69
C2CD3-214ENST00000540057 BMS1Q14692 1282 aaKnown RBP4.47□□□□□ -1.69
C2CD3-214ENST00000540057 MLF2Q15773 248 aaPredicted RBP4.47□□□□□ -1.69
C2CD3-214ENST00000540057 CCDC6Q16204 474 aa4.47□□□□□ -1.69
C2CD3-214ENST00000540057 SKOR2Q2VWA4 1001 aaPredicted RBP4.47□□□□□ -1.69
C2CD3-214ENST00000540057 VWA3BQ502W6 1294 aa4.47□□□□□ -1.69
C2CD3-214ENST00000540057 SLC44A4Q53GD3 710 aa4.47□□□□□ -1.69
C2CD3-214ENST00000540057 GPATCH4Q5T3I0 446 aaKnown RBP4.47□□□□□ -1.69
C2CD3-214ENST00000540057 FBXW10Q5XX13 1052 aa4.47□□□□□ -1.69
C2CD3-214ENST00000540057 PAQR3Q6TCH7 311 aa4.47□□□□□ -1.69
C2CD3-214ENST00000540057 FAM43BQ6ZT52 329 aaPredicted RBP4.47□□□□□ -1.69
C2CD3-214ENST00000540057 TMEM173Q86WV6 379 aaPredicted RBP4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms