RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 PCDHB5Q9Y5E4 795 aa12.46□□□□□ -0.41
VTN-202ENST00000539746 PCDHGC5Q9Y5F6 944 aa12.46□□□□□ -0.41
VTN-202ENST00000539746 BACE2Q9Y5Z0 518 aa12.46□□□□□ -0.41
VTN-202ENST00000539746 CCDC66A2RUB6 948 aa12.45□□□□□ -0.42
VTN-202ENST00000539746 RNF8O76064 485 aa12.45□□□□□ -0.42
VTN-202ENST00000539746 MICAL2O94851 1124 aa12.45□□□□□ -0.42
VTN-202ENST00000539746 GJB5O95377 273 aa12.45□□□□□ -0.42
VTN-202ENST00000539746 RB1P06400 928 aa12.45□□□□□ -0.42
VTN-202ENST00000539746 ATP2A2P16615 1042 aaKnown RBP12.45□□□□□ -0.42
VTN-202ENST00000539746 ABCB4P21439 1286 aa12.45□□□□□ -0.42
VTN-202ENST00000539746 FGFR3P22607 806 aa12.45□□□□□ -0.42
VTN-202ENST00000539746 PAFAH1B1P43034 410 aa12.45□□□□□ -0.42
VTN-202ENST00000539746 PLA2G4AP47712 749 aa12.45□□□□□ -0.42
VTN-202ENST00000539746 RAP1GAPP47736 663 aa12.45□□□□□ -0.42
VTN-202ENST00000539746 GABRB2P47870 512 aa12.45□□□□□ -0.42
VTN-202ENST00000539746 TUFMP49411 452 aaKnown RBP12.45□□□□□ -0.42
VTN-202ENST00000539746 PDCLQ13371 301 aa12.45□□□□□ -0.42
VTN-202ENST00000539746 GPNMBQ14956 572 aa12.45□□□□□ -0.42
VTN-202ENST00000539746 HADHQ16836 314 aaKnown RBP12.45□□□□□ -0.42
VTN-202ENST00000539746 CTXN3Q4LDR2 81 aa12.45□□□□□ -0.42
VTN-202ENST00000539746 TIGD5Q53EQ6 642 aa12.45□□□□□ -0.42
VTN-202ENST00000539746 TPGS2Q68CL5 300 aa12.45□□□□□ -0.42
VTN-202ENST00000539746 FUT10Q6P4F1 479 aa12.45□□□□□ -0.42
VTN-202ENST00000539746 KCNT2Q6UVM3 1135 aa12.45□□□□□ -0.42
VTN-202ENST00000539746 PEX26Q7Z412 305 aa12.45□□□□□ -0.42
VTN-202ENST00000539746 SCML4Q8N228 414 aa12.45□□□□□ -0.42
VTN-202ENST00000539746 LNX1Q8TBB1 728 aaPredicted RBP12.45□□□□□ -0.42
VTN-202ENST00000539746 ZNF564Q8TBZ8 553 aaPredicted RBP12.45□□□□□ -0.42
VTN-202ENST00000539746 MAIP1Q8WWC4 291 aa12.45□□□□□ -0.42
VTN-202ENST00000539746 KCTD13Q8WZ19 329 aa12.45□□□□□ -0.42
VTN-202ENST00000539746 IRGQQ8WZA9 623 aa12.45□□□□□ -0.42
VTN-202ENST00000539746 BADQ92934 168 aa12.45□□□□□ -0.42
VTN-202ENST00000539746 ZNF689Q96CS4 500 aaPredicted RBP12.45□□□□□ -0.42
VTN-202ENST00000539746 CDK5RAP1Q96SZ6 601 aaKnown RBP12.45□□□□□ -0.42
VTN-202ENST00000539746 MRPL45Q9BRJ2 306 aaKnown RBP12.45□□□□□ -0.42
VTN-202ENST00000539746 FBXO44Q9H4M3 255 aa12.45□□□□□ -0.42
VTN-202ENST00000539746 ST7Q9NRC1 585 aa12.45□□□□□ -0.42
VTN-202ENST00000539746 ASNSD1Q9NWL6 643 aa12.45□□□□□ -0.42
VTN-202ENST00000539746 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.45□□□□□ -0.42
VTN-202ENST00000539746 DNAI1Q9UI46 699 aa12.45□□□□□ -0.42
VTN-202ENST00000539746 NENFQ9UMX5 172 aa12.45□□□□□ -0.42
VTN-202ENST00000539746 PRG3Q9Y2Y8 225 aaPredicted RBP12.45□□□□□ -0.42
VTN-202ENST00000539746 COL4A6Q14031 1691 aa12.45□□□□□ -0.42
VTN-202ENST00000539746 ANK1P16157 1881 aa12.44□□□□□ -0.42
VTN-202ENST00000539746 PDCD11Q14690 1871 aaKnown RBP12.44□□□□□ -0.42
VTN-202ENST00000539746 MEIS3P2A8K0S8 358 aa12.44□□□□□ -0.42
VTN-202ENST00000539746 TMCO5BA8MYB1 307 aa12.44□□□□□ -0.42
VTN-202ENST00000539746 SPTLC1O15269 473 aa12.44□□□□□ -0.42
VTN-202ENST00000539746 TLL1O43897 1013 aa12.44□□□□□ -0.42
VTN-202ENST00000539746 SOD2P04179 222 aa12.44□□□□□ -0.42
VTN-202ENST00000539746 PDGFRBP09619 1106 aa12.44□□□□□ -0.42
VTN-202ENST00000539746 PNMA6AP0CW24 399 aaPredicted RBP12.44□□□□□ -0.42
VTN-202ENST00000539746 KRT3P12035 628 aa12.44□□□□□ -0.42
VTN-202ENST00000539746 CHRNB2P17787 502 aa12.44□□□□□ -0.42
VTN-202ENST00000539746 GLUD2P49448 558 aa12.44□□□□□ -0.42
VTN-202ENST00000539746 TERF1P54274 439 aa12.44□□□□□ -0.42
VTN-202ENST00000539746 PSMC1P62191 440 aaKnown RBP12.44□□□□□ -0.42
VTN-202ENST00000539746 HTRA4P83105 476 aaPredicted RBP12.44□□□□□ -0.42
VTN-202ENST00000539746 SMC1AQ14683 1233 aaKnown RBP12.44□□□□□ -0.42
VTN-202ENST00000539746 RPS6KA1Q15418 735 aa12.44□□□□□ -0.42
VTN-202ENST00000539746 FAM171A1Q5VUB5 890 aa12.44□□□□□ -0.42
VTN-202ENST00000539746 PLEKHA7Q6IQ23 1121 aa12.44□□□□□ -0.42
VTN-202ENST00000539746 ZNF365Q70YC5 407 aa12.44□□□□□ -0.42
VTN-202ENST00000539746 MON1BQ7L1V2 547 aa12.44□□□□□ -0.42
VTN-202ENST00000539746 DDX53Q86TM3 631 aaKnown RBP12.44□□□□□ -0.42
VTN-202ENST00000539746 SLC35G2Q8TBE7 412 aa12.44□□□□□ -0.42
VTN-202ENST00000539746 WHAMMQ8TF30 809 aa12.44□□□□□ -0.42
VTN-202ENST00000539746 CPA5Q8WXQ8 436 aa12.44□□□□□ -0.42
VTN-202ENST00000539746 ZNF592Q92610 1267 aa12.44□□□□□ -0.42
VTN-202ENST00000539746 PPP2R3CQ969Q6 453 aa12.44□□□□□ -0.42
VTN-202ENST00000539746 ABHD8Q96I13 439 aa12.44□□□□□ -0.42
VTN-202ENST00000539746 IGSF21Q96ID5 467 aa12.44□□□□□ -0.42
VTN-202ENST00000539746 PBKQ96KB5 322 aa12.44□□□□□ -0.42
VTN-202ENST00000539746 C11orf84Q9BUA3 381 aaPredicted RBP12.44□□□□□ -0.42
VTN-202ENST00000539746 HERC2P3Q9BVR0 1158 aa12.44□□□□□ -0.42
VTN-202ENST00000539746 NUP85Q9BW27 656 aa12.44□□□□□ -0.42
VTN-202ENST00000539746 EMILIN2Q9BXX0 1053 aa12.44□□□□□ -0.42
VTN-202ENST00000539746 CNGB3Q9NQW8 809 aa12.44□□□□□ -0.42
VTN-202ENST00000539746 MRPL17Q9NRX2 175 aaKnown RBP12.44□□□□□ -0.42
VTN-202ENST00000539746 MIOSQ9NXC5 875 aa12.44□□□□□ -0.42
VTN-202ENST00000539746 STAP1Q9ULZ2 295 aa12.44□□□□□ -0.42
VTN-202ENST00000539746 HTTP42858 3142 aa12.44□□□□□ -0.42
VTN-202ENST00000539746 SIGLEC16A6NMB1 481 aa12.43□□□□□ -0.42
VTN-202ENST00000539746 SPOPO43791 374 aa12.43□□□□□ -0.42
VTN-202ENST00000539746 HSF2BPO75031 334 aa12.43□□□□□ -0.42
VTN-202ENST00000539746 DDHD2O94830 711 aa12.43□□□□□ -0.42
VTN-202ENST00000539746 RTN3O95197 1032 aaPredicted RBP12.43□□□□□ -0.42
VTN-202ENST00000539746 KRT7P08729 469 aa12.43□□□□□ -0.42
VTN-202ENST00000539746 CPB1P15086 417 aa12.43□□□□□ -0.42
VTN-202ENST00000539746 ELF1P32519 619 aa12.43□□□□□ -0.42
VTN-202ENST00000539746 GPD2P43304 727 aa12.43□□□□□ -0.42
VTN-202ENST00000539746 SLC11A1P49279 550 aa12.43□□□□□ -0.42
VTN-202ENST00000539746 PSEN1P49768 467 aa12.43□□□□□ -0.42
VTN-202ENST00000539746 ZNF135P52742 658 aaPredicted RBP12.43□□□□□ -0.42
VTN-202ENST00000539746 VEPH1Q14D04 833 aa12.43□□□□□ -0.42
VTN-202ENST00000539746 WHAMMP3Q1A5X7 153 aa12.43□□□□□ -0.42
VTN-202ENST00000539746 MDH1BQ5I0G3 518 aa12.43□□□□□ -0.42
VTN-202ENST00000539746 VARS2Q5ST30 1063 aaKnown RBP12.43□□□□□ -0.42
VTN-202ENST00000539746 CCDC181Q5TID7 509 aa12.43□□□□□ -0.42
VTN-202ENST00000539746 FAM171BQ6P995 826 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms