RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 CHADO15335 359 aa17.96■□□□□ 0.47
DDB1-215ENST00000539712 TADA3O75528 432 aa17.96■□□□□ 0.47
DDB1-215ENST00000539712 NOL4O94818 638 aa17.96■□□□□ 0.47
DDB1-215ENST00000539712 STAU1O95793 577 aaKnown RBP17.96■□□□□ 0.47
DDB1-215ENST00000539712 MYL6P60660 151 aa17.96■□□□□ 0.47
DDB1-215ENST00000539712 PSMC1P62191 440 aaKnown RBP17.96■□□□□ 0.47
DDB1-215ENST00000539712 DPYDQ12882 1025 aa17.96■□□□□ 0.47
DDB1-215ENST00000539712 FSIP1Q8NA03 581 aa17.96■□□□□ 0.47
DDB1-215ENST00000539712 FUBP3Q96I24 572 aaKnown RBP eCLIP17.96■□□□□ 0.47
DDB1-215ENST00000539712 MYRFLQ96LU7 910 aa17.96■□□□□ 0.47
DDB1-215ENST00000539712 SYT15Q9BQS2 421 aa17.96■□□□□ 0.47
DDB1-215ENST00000539712 SMG9Q9H0W8 520 aaKnown RBP17.96■□□□□ 0.47
DDB1-215ENST00000539712 OBP2AQ9NY56 170 aa17.96■□□□□ 0.47
DDB1-215ENST00000539712 CDH9Q9ULB4 789 aa17.96■□□□□ 0.47
DDB1-215ENST00000539712 DMXL1Q9Y485 3027 aa17.96■□□□□ 0.46
DDB1-215ENST00000539712 NUP210Q8TEM1 1887 aaPredicted RBP17.95■□□□□ 0.46
DDB1-215ENST00000539712 PRR23AA6NEV1 266 aa17.95■□□□□ 0.46
DDB1-215ENST00000539712 LRRIQ3A6PVS8 624 aaPredicted RBP17.95■□□□□ 0.46
DDB1-215ENST00000539712 PDXKO00764 312 aa17.95■□□□□ 0.46
DDB1-215ENST00000539712 TACC1O75410 805 aa17.95■□□□□ 0.46
DDB1-215ENST00000539712 RHOBTB3O94955 611 aa17.95■□□□□ 0.46
DDB1-215ENST00000539712 C4BPAP04003 597 aaKnown RBP17.95■□□□□ 0.46
DDB1-215ENST00000539712 PDGFRBP09619 1106 aa17.95■□□□□ 0.46
DDB1-215ENST00000539712 SP9P0CG40 484 aa17.95■□□□□ 0.46
DDB1-215ENST00000539712 MAGEA11P43364 429 aa17.95■□□□□ 0.46
DDB1-215ENST00000539712 DLG4P78352 724 aa17.95■□□□□ 0.46
DDB1-215ENST00000539712 ARHGAP15Q53QZ3 475 aa17.95■□□□□ 0.46
DDB1-215ENST00000539712 WDR44Q5JSH3 913 aa17.95■□□□□ 0.46
DDB1-215ENST00000539712 TDRD10Q5VZ19 366 aaKnown RBP17.95■□□□□ 0.46
DDB1-215ENST00000539712 KRBA2Q6ZNG9 492 aa17.95■□□□□ 0.46
DDB1-215ENST00000539712 CMTM8Q8IZV2 173 aa17.95■□□□□ 0.46
DDB1-215ENST00000539712 RIN3Q8TB24 985 aa17.95■□□□□ 0.46
DDB1-215ENST00000539712 TRMT2BQ96GJ1 504 aaKnown RBP17.95■□□□□ 0.46
DDB1-215ENST00000539712 ZFYVE19Q96K21 471 aa17.95■□□□□ 0.46
DDB1-215ENST00000539712 BCO2Q9BYV7 579 aa17.95■□□□□ 0.46
DDB1-215ENST00000539712 CCL26Q9Y258 94 aa17.95■□□□□ 0.46
DDB1-215ENST00000539712 ATP6V1DQ9Y5K8 247 aa17.95■□□□□ 0.46
DDB1-215ENST00000539712 PIAS3Q9Y6X2 628 aa17.95■□□□□ 0.46
DDB1-215ENST00000539712 SPTBN4Q9H254 2564 aa17.94■□□□□ 0.46
DDB1-215ENST00000539712 GPR179Q6PRD1 2367 aa17.94■□□□□ 0.46
DDB1-215ENST00000539712 SLC38A8A6NNN8 435 aa17.94■□□□□ 0.46
DDB1-215ENST00000539712 VNN1O95497 513 aa17.94■□□□□ 0.46
DDB1-215ENST00000539712 NR3C1P04150 777 aa17.94■□□□□ 0.46
DDB1-215ENST00000539712 FAM163BP0C2L3 166 aa17.94■□□□□ 0.46
DDB1-215ENST00000539712 CSH1P0DML2 217 aa17.94■□□□□ 0.46
DDB1-215ENST00000539712 CSH2P0DML3 217 aa17.94■□□□□ 0.46
DDB1-215ENST00000539712 GNL1P36915 607 aaPredicted RBP17.94■□□□□ 0.46
DDB1-215ENST00000539712 RPS9P46781 194 aaKnown RBP17.94■□□□□ 0.46
DDB1-215ENST00000539712 MLLT6P55198 1093 aaPredicted RBP17.94■□□□□ 0.46
DDB1-215ENST00000539712 RPL10AP62906 217 aaKnown RBP17.94■□□□□ 0.46
DDB1-215ENST00000539712 TAF12Q16514 161 aa17.94■□□□□ 0.46
DDB1-215ENST00000539712 WDR72Q3MJ13 1102 aa17.94■□□□□ 0.46
DDB1-215ENST00000539712 C1orf220Q5T0J3 134 aa17.94■□□□□ 0.46
DDB1-215ENST00000539712 TXNDC8Q6A555 127 aa17.94■□□□□ 0.46
DDB1-215ENST00000539712 SPATA2LQ8IUW3 424 aaPredicted RBP17.94■□□□□ 0.46
DDB1-215ENST00000539712 MYLPFQ96A32 169 aa17.94■□□□□ 0.46
DDB1-215ENST00000539712 ELMO3Q96BJ8 720 aa17.94■□□□□ 0.46
DDB1-215ENST00000539712 MMS19Q96T76 1030 aa17.94■□□□□ 0.46
DDB1-215ENST00000539712 VRTNQ9H8Y1 702 aa17.94■□□□□ 0.46
DDB1-215ENST00000539712 R3HCC1Q9Y3T6 440 aaKnown RBP17.94■□□□□ 0.46
DDB1-215ENST00000539712 OBSL1O75147 1896 aa17.94■□□□□ 0.46
DDB1-215ENST00000539712 MAN2B1O00754 1011 aa17.93■□□□□ 0.46
DDB1-215ENST00000539712 ZNF202O95125 648 aa17.93■□□□□ 0.46
DDB1-215ENST00000539712 SOX9P48436 509 aa17.93■□□□□ 0.46
DDB1-215ENST00000539712 MON1AQ86VX9 555 aa17.93■□□□□ 0.46
DDB1-215ENST00000539712 MAB21L3Q8N8X9 362 aa17.93■□□□□ 0.46
DDB1-215ENST00000539712 MYCBPAPQ8TBZ2 947 aa17.93■□□□□ 0.46
DDB1-215ENST00000539712 USP13Q92995 863 aaPredicted RBP17.93■□□□□ 0.46
DDB1-215ENST00000539712 PCED1BQ96HM7 432 aa17.93■□□□□ 0.46
DDB1-215ENST00000539712 DPEP3Q9H4B8 488 aa17.93■□□□□ 0.46
DDB1-215ENST00000539712 TMEM30AQ9NV96 361 aa17.93■□□□□ 0.46
DDB1-215ENST00000539712 SPATA6Q9NWH7 488 aaPredicted RBP17.93■□□□□ 0.46
DDB1-215ENST00000539712 MAGED2Q9UNF1 606 aaPredicted RBP17.93■□□□□ 0.46
DDB1-215ENST00000539712 TRAF3IP3Q9Y228 551 aa17.93■□□□□ 0.46
DDB1-215ENST00000539712 MRPS17Q9Y2R5 130 aaKnown RBP17.93■□□□□ 0.46
DDB1-215ENST00000539712 R4GN57 208 aa17.93■□□□□ 0.46
DDB1-215ENST00000539712 PATJQ8NI35 1801 aa17.93■□□□□ 0.46
DDB1-215ENST00000539712 PTPRDP23468 1912 aa17.92■□□□□ 0.46
DDB1-215ENST00000539712 DCHS1Q96JQ0 3298 aa17.92■□□□□ 0.46
DDB1-215ENST00000539712 SOBPA7XYQ1 873 aa17.92■□□□□ 0.46
DDB1-215ENST00000539712 BDNFP23560 247 aa17.92■□□□□ 0.46
DDB1-215ENST00000539712 CCNE1P24864 410 aa17.92■□□□□ 0.46
DDB1-215ENST00000539712 ATICP31939 592 aa17.92■□□□□ 0.46
DDB1-215ENST00000539712 MAGEA9P43362 315 aa17.92■□□□□ 0.46
DDB1-215ENST00000539712 TNK2Q07912 1038 aa17.92■□□□□ 0.46
DDB1-215ENST00000539712 ARHGAP29Q52LW3 1261 aa17.92■□□□□ 0.46
DDB1-215ENST00000539712 TXNDC11Q6PKC3 985 aa17.92■□□□□ 0.46
DDB1-215ENST00000539712 C4orf50Q6ZRC1 276 aa17.92■□□□□ 0.46
DDB1-215ENST00000539712 SCN4BQ8IWT1 228 aa17.92■□□□□ 0.46
DDB1-215ENST00000539712 YAF2Q8IY57 180 aa17.92■□□□□ 0.46
DDB1-215ENST00000539712 CELF5Q8N6W0 485 aaKnown RBP17.92■□□□□ 0.46
DDB1-215ENST00000539712 BPIFB1Q8TDL5 484 aa17.92■□□□□ 0.46
DDB1-215ENST00000539712 FAM3CQ92520 227 aa17.92■□□□□ 0.46
DDB1-215ENST00000539712 NKD2Q969F2 451 aaPredicted RBP17.92■□□□□ 0.46
DDB1-215ENST00000539712 SPATA17Q96L03 361 aa17.92■□□□□ 0.46
DDB1-215ENST00000539712 GCNAQ96QF7 691 aa17.92■□□□□ 0.46
DDB1-215ENST00000539712 SLC22A12Q96S37 553 aa17.92■□□□□ 0.46
DDB1-215ENST00000539712 FAM83CQ9BQN1 747 aa17.92■□□□□ 0.46
DDB1-215ENST00000539712 GTSE1Q9NYZ3 720 aa17.92■□□□□ 0.46
DDB1-215ENST00000539712 MAGEC2Q9UBF1 373 aaPredicted RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms