RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 RALAP11233 206 aa10.72□□□□□ -0.69
SPARC-209ENST00000539687 CST5P28325 142 aaPredicted RBP10.72□□□□□ -0.69
SPARC-209ENST00000539687 LRPAP1P30533 357 aa10.72□□□□□ -0.69
SPARC-209ENST00000539687 GPD2P43304 727 aa10.72□□□□□ -0.69
SPARC-209ENST00000539687 ACADSBP45954 432 aa10.72□□□□□ -0.69
SPARC-209ENST00000539687 RAB27AP51159 221 aa10.72□□□□□ -0.69
SPARC-209ENST00000539687 CDH8P55286 799 aa10.72□□□□□ -0.69
SPARC-209ENST00000539687 MRPS25P82663 173 aaKnown RBP10.72□□□□□ -0.69
SPARC-209ENST00000539687 KLF1Q13351 362 aaPredicted RBP10.72□□□□□ -0.69
SPARC-209ENST00000539687 SIX1Q15475 284 aaPredicted RBP10.72□□□□□ -0.69
SPARC-209ENST00000539687 PTPN20Q4JDL3 420 aa10.72□□□□□ -0.69
SPARC-209ENST00000539687 TFDP3Q5H9I0 405 aa10.72□□□□□ -0.69
SPARC-209ENST00000539687 GNASQ5JWF2 1037 aa10.72□□□□□ -0.69
SPARC-209ENST00000539687 C9orf57Q5W0N0 161 aa10.72□□□□□ -0.69
SPARC-209ENST00000539687 ARCQ7LC44 396 aa10.72□□□□□ -0.69
SPARC-209ENST00000539687 ADAT2Q7Z6V5 191 aaKnown RBP10.72□□□□□ -0.69
SPARC-209ENST00000539687 VSIG1Q86XK7 387 aa10.72□□□□□ -0.69
SPARC-209ENST00000539687 XYLT1Q86Y38 959 aa10.72□□□□□ -0.69
SPARC-209ENST00000539687 TOP6BLQ8N6T0 577 aa10.72□□□□□ -0.69
SPARC-209ENST00000539687 SPATA18Q8TC71 538 aa10.72□□□□□ -0.69
SPARC-209ENST00000539687 SNF8Q96H20 258 aa10.72□□□□□ -0.69
SPARC-209ENST00000539687 GDAP1L1Q96MZ0 367 aa10.72□□□□□ -0.69
SPARC-209ENST00000539687 ZIM3Q96PE6 472 aa10.72□□□□□ -0.69
SPARC-209ENST00000539687 DCLK3Q9C098 648 aa10.72□□□□□ -0.69
SPARC-209ENST00000539687 STMN4Q9H169 189 aaPredicted RBP10.72□□□□□ -0.69
SPARC-209ENST00000539687 DPH5Q9H2P9 285 aa10.72□□□□□ -0.69
SPARC-209ENST00000539687 SNX25Q9H3E2 840 aa10.72□□□□□ -0.69
SPARC-209ENST00000539687 ERVK-5Q9HDB9 667 aa10.72□□□□□ -0.69
SPARC-209ENST00000539687 ADAM21Q9UKJ8 722 aa10.72□□□□□ -0.69
SPARC-209ENST00000539687 SNX9Q9Y5X1 595 aa10.72□□□□□ -0.69
SPARC-209ENST00000539687 SMIM28A0A1B0GU29 152 aa10.71□□□□□ -0.69
SPARC-209ENST00000539687 ARHGEF37A1IGU5 675 aa10.71□□□□□ -0.69
SPARC-209ENST00000539687 KPNA7A9QM74 516 aa10.71□□□□□ -0.69
SPARC-209ENST00000539687 AGPSO00116 658 aa10.71□□□□□ -0.69
SPARC-209ENST00000539687 SMAPO00193 183 aa10.71□□□□□ -0.69
SPARC-209ENST00000539687 DPYSL4O14531 572 aa10.71□□□□□ -0.69
SPARC-209ENST00000539687 HUS1O60921 280 aa10.71□□□□□ -0.69
SPARC-209ENST00000539687 GNRH1P01148 92 aa10.71□□□□□ -0.69
SPARC-209ENST00000539687 ATF2P15336 505 aa10.71□□□□□ -0.69
SPARC-209ENST00000539687 GPD1P21695 349 aa10.71□□□□□ -0.69
SPARC-209ENST00000539687 FGFR4P22455 802 aa10.71□□□□□ -0.69
SPARC-209ENST00000539687 HSD17B3P37058 310 aa10.71□□□□□ -0.69
SPARC-209ENST00000539687 ZNF143P52747 638 aaPredicted RBP10.71□□□□□ -0.69
SPARC-209ENST00000539687 BCAT1P54687 386 aa10.71□□□□□ -0.69
SPARC-209ENST00000539687 TAS2R40P59535 323 aa10.71□□□□□ -0.69
SPARC-209ENST00000539687 RPL7AP62424 266 aaKnown RBP10.71□□□□□ -0.69
SPARC-209ENST00000539687 BEX3Q00994 111 aa10.71□□□□□ -0.69
SPARC-209ENST00000539687 KRT17Q04695 432 aa10.71□□□□□ -0.69
SPARC-209ENST00000539687 DMTNQ08495 405 aa10.71□□□□□ -0.69
SPARC-209ENST00000539687 TMEM62Q0P6H9 643 aa10.71□□□□□ -0.69
SPARC-209ENST00000539687 ARHGEF6Q15052 776 aa10.71□□□□□ -0.69
SPARC-209ENST00000539687 TWF2Q6IBS0 349 aaKnown RBP10.71□□□□□ -0.69
SPARC-209ENST00000539687 LEKR1Q6ZMV7 388 aa10.71□□□□□ -0.69
SPARC-209ENST00000539687 SPOCD1Q6ZMY3 1216 aa10.71□□□□□ -0.69
SPARC-209ENST00000539687 TRMT10CQ7L0Y3 403 aaKnown RBP10.71□□□□□ -0.69
SPARC-209ENST00000539687 ZNF771Q7L3S4 317 aaPredicted RBP10.71□□□□□ -0.69
SPARC-209ENST00000539687 TMC3Q7Z5M5 1100 aa10.71□□□□□ -0.69
SPARC-209ENST00000539687 MAP7D3Q8IWC1 876 aa10.71□□□□□ -0.69
SPARC-209ENST00000539687 CRYBG2Q8N1P7 616 aa10.71□□□□□ -0.69
SPARC-209ENST00000539687 TSEN2Q8NCE0 465 aaKnown RBP10.71□□□□□ -0.69
SPARC-209ENST00000539687 APPL2Q8NEU8 664 aa10.71□□□□□ -0.69
SPARC-209ENST00000539687 ART4Q93070 314 aa10.71□□□□□ -0.69
SPARC-209ENST00000539687 CCDC114Q96M63 670 aa10.71□□□□□ -0.69
SPARC-209ENST00000539687 SLITRK1Q96PX8 696 aa10.71□□□□□ -0.69
SPARC-209ENST00000539687 TBCBQ99426 244 aa10.71□□□□□ -0.69
SPARC-209ENST00000539687 TRIM51Q9BSJ1 452 aa10.71□□□□□ -0.69
SPARC-209ENST00000539687 CNPY3Q9BT09 278 aa10.71□□□□□ -0.69
SPARC-209ENST00000539687 TRAIPQ9BWF2 469 aa10.71□□□□□ -0.69
SPARC-209ENST00000539687 EIF2AQ9BY44 585 aaKnown RBP10.71□□□□□ -0.69
SPARC-209ENST00000539687 NXF3Q9H4D5 531 aaKnown RBP10.71□□□□□ -0.69
SPARC-209ENST00000539687 FAM204AQ9H8W3 233 aa10.71□□□□□ -0.69
SPARC-209ENST00000539687 UBN1Q9NPG3 1134 aa10.71□□□□□ -0.69
SPARC-209ENST00000539687 ZDHHC18Q9NUE0 388 aa10.71□□□□□ -0.69
SPARC-209ENST00000539687 TSPAN16Q9UKR8 245 aa10.71□□□□□ -0.69
SPARC-209ENST00000539687 DRG1Q9Y295 367 aaKnown RBP10.71□□□□□ -0.69
SPARC-209ENST00000539687 IPPQ9Y573 584 aa10.71□□□□□ -0.69
SPARC-209ENST00000539687 SQORQ9Y6N5 450 aa10.71□□□□□ -0.69
SPARC-209ENST00000539687 CITO14578 2027 aa10.7□□□□□ -0.7
SPARC-209ENST00000539687 CASP8AP2Q9UKL3 1982 aa10.7□□□□□ -0.7
SPARC-209ENST00000539687 THSD7BQ9C0I4 1608 aa10.7□□□□□ -0.7
SPARC-209ENST00000539687 A8MXQ7 604 aa10.7□□□□□ -0.7
SPARC-209ENST00000539687 GOLGA8SH3BPF8 625 aa10.7□□□□□ -0.7
SPARC-209ENST00000539687 RPS6KA5O75582 802 aa10.7□□□□□ -0.7
SPARC-209ENST00000539687 ZNF189O75820 626 aaPredicted RBP10.7□□□□□ -0.7
SPARC-209ENST00000539687 NUDT17P0C025 328 aa10.7□□□□□ -0.7
SPARC-209ENST00000539687 FAM153BP0C7A2 387 aa10.7□□□□□ -0.7
SPARC-209ENST00000539687 RARGP13631 454 aa10.7□□□□□ -0.7
SPARC-209ENST00000539687 WARSP23381 471 aaKnown RBP10.7□□□□□ -0.7
SPARC-209ENST00000539687 PMS2P54278 862 aa10.7□□□□□ -0.7
SPARC-209ENST00000539687 PLTPP55058 493 aa10.7□□□□□ -0.7
SPARC-209ENST00000539687 DHX9Q08211 1270 aaKnown RBP10.7□□□□□ -0.7
SPARC-209ENST00000539687 IFFO1Q0D2I5 559 aa10.7□□□□□ -0.7
SPARC-209ENST00000539687 GOLGA7BQ2TAP0 167 aa10.7□□□□□ -0.7
SPARC-209ENST00000539687 FAM153CQ494X1 144 aa10.7□□□□□ -0.7
SPARC-209ENST00000539687 UBXN11Q5T124 520 aa10.7□□□□□ -0.7
SPARC-209ENST00000539687 FAM102AQ5T9C2 384 aaPredicted RBP10.7□□□□□ -0.7
SPARC-209ENST00000539687 CYP4A22Q5TCH4 519 aa10.7□□□□□ -0.7
SPARC-209ENST00000539687 AGBL2Q5U5Z8 902 aa10.7□□□□□ -0.7
SPARC-209ENST00000539687 DENND2CQ68D51 928 aa10.7□□□□□ -0.7
SPARC-209ENST00000539687 TTC27Q6P3X3 843 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms