RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 TXNRD2Q9NNW7 524 aa14.79□□□□□ -0.04
UBE3B-210ENST00000539599 NRBP2Q9NSY0 501 aa14.79□□□□□ -0.04
UBE3B-210ENST00000539599 SIX4Q9UIU6 781 aa14.79□□□□□ -0.04
UBE3B-210ENST00000539599 SNCAIPQ9Y6H5 919 aa14.79□□□□□ -0.04
UBE3B-210ENST00000539599 C19orf81C9J6K1 198 aa14.79□□□□□ -0.04
UBE3B-210ENST00000539599 USP2O75604 605 aaPredicted RBP14.79□□□□□ -0.04
UBE3B-210ENST00000539599 STAM2O75886 525 aa14.79□□□□□ -0.04
UBE3B-210ENST00000539599 TARSP26639 723 aaKnown RBP14.79□□□□□ -0.04
UBE3B-210ENST00000539599 GALNTL6Q49A17 601 aa14.79□□□□□ -0.04
UBE3B-210ENST00000539599 FAXCQ5TGI0 409 aa14.79□□□□□ -0.04
UBE3B-210ENST00000539599 ARHGEF18Q6ZSZ5 1173 aa14.79□□□□□ -0.04
UBE3B-210ENST00000539599 AGAP11Q8TF27 550 aa14.79□□□□□ -0.04
UBE3B-210ENST00000539599 CPT1BQ92523 772 aa14.79□□□□□ -0.04
UBE3B-210ENST00000539599 MAGEB18Q96M61 343 aa14.79□□□□□ -0.04
UBE3B-210ENST00000539599 TRIM56Q9BRZ2 755 aaKnown RBP14.79□□□□□ -0.04
UBE3B-210ENST00000539599 MYLK2Q9H1R3 596 aa14.79□□□□□ -0.04
UBE3B-210ENST00000539599 SYNCQ9H7C4 482 aa14.79□□□□□ -0.04
UBE3B-210ENST00000539599 GPATCH2LQ9NWQ4 482 aa14.79□□□□□ -0.04
UBE3B-210ENST00000539599 PRKAG3Q9UGI9 489 aa14.79□□□□□ -0.04
UBE3B-210ENST00000539599 ADM5C9JUS6 153 aa14.79□□□□□ -0.04
UBE3B-210ENST00000539599 OGTO15294 1046 aa14.79□□□□□ -0.04
UBE3B-210ENST00000539599 ASMTLO95671 621 aa14.79□□□□□ -0.04
UBE3B-210ENST00000539599 ITGB3P05106 788 aa14.79□□□□□ -0.04
UBE3B-210ENST00000539599 CALB1P05937 261 aa14.79□□□□□ -0.04
UBE3B-210ENST00000539599 NQO1P15559 274 aaKnown RBP14.79□□□□□ -0.04
UBE3B-210ENST00000539599 KRT4P19013 534 aa14.79□□□□□ -0.04
UBE3B-210ENST00000539599 ATP5DP30049 168 aa14.79□□□□□ -0.04
UBE3B-210ENST00000539599 ICAM3P32942 547 aa14.79□□□□□ -0.04
UBE3B-210ENST00000539599 MAPK6Q16659 721 aa14.79□□□□□ -0.04
UBE3B-210ENST00000539599 C15orf59Q2T9L4 293 aaPredicted RBP14.79□□□□□ -0.04
UBE3B-210ENST00000539599 Q3C1V9 767 aa14.79□□□□□ -0.04
UBE3B-210ENST00000539599 BBS9Q3SYG4 887 aa14.79□□□□□ -0.04
UBE3B-210ENST00000539599 OTUD5Q96G74 571 aa14.79□□□□□ -0.04
UBE3B-210ENST00000539599 ARL2BPQ9Y2Y0 163 aa14.79□□□□□ -0.04
UBE3B-210ENST00000539599 EIF4E1BA6NMX2 242 aaKnown RBP14.78□□□□□ -0.04
UBE3B-210ENST00000539599 GPR25O00155 361 aa14.78□□□□□ -0.04
UBE3B-210ENST00000539599 ATP2A1O14983 1001 aa14.78□□□□□ -0.04
UBE3B-210ENST00000539599 RPS12P25398 132 aaKnown RBP14.78□□□□□ -0.04
UBE3B-210ENST00000539599 RPL22P35268 128 aaKnown RBP14.78□□□□□ -0.04
UBE3B-210ENST00000539599 COPS2P61201 443 aa14.78□□□□□ -0.04
UBE3B-210ENST00000539599 BASP1P80723 227 aaKnown RBP14.78□□□□□ -0.04
UBE3B-210ENST00000539599 ZNF449Q6P9G9 518 aa14.78□□□□□ -0.04
UBE3B-210ENST00000539599 LBX2Q6XYB7 198 aa14.78□□□□□ -0.04
UBE3B-210ENST00000539599 SEPT1Q8WYJ6 367 aa14.78□□□□□ -0.04
UBE3B-210ENST00000539599 ERP27Q96DN0 273 aa14.78□□□□□ -0.04
UBE3B-210ENST00000539599 CFAP57Q96MR6 1250 aa14.78□□□□□ -0.04
UBE3B-210ENST00000539599 PEBP4Q96S96 227 aa14.78□□□□□ -0.04
UBE3B-210ENST00000539599 LPIN3Q9BQK8 851 aa14.78□□□□□ -0.04
UBE3B-210ENST00000539599 CCDC77Q9BR77 488 aa14.78□□□□□ -0.04
UBE3B-210ENST00000539599 MAGEB5Q9BZ81 275 aa14.78□□□□□ -0.04
UBE3B-210ENST00000539599 VPS33BQ9H267 617 aa14.78□□□□□ -0.04
UBE3B-210ENST00000539599 TMEM134Q9H6X4 195 aa14.78□□□□□ -0.04
UBE3B-210ENST00000539599 PHTF1Q9UMS5 762 aa14.78□□□□□ -0.04
UBE3B-210ENST00000539599 CHMP2BQ9UQN3 213 aa14.78□□□□□ -0.04
UBE3B-210ENST00000539599 NOP56O00567 594 aaKnown RBP14.78□□□□□ -0.04
UBE3B-210ENST00000539599 IRF6O14896 467 aa14.78□□□□□ -0.04
UBE3B-210ENST00000539599 ADRA1DP25100 572 aa14.78□□□□□ -0.04
UBE3B-210ENST00000539599 BNIP1Q12981 228 aa14.78□□□□□ -0.04
UBE3B-210ENST00000539599 MTFR1Q15390 333 aa14.78□□□□□ -0.04
UBE3B-210ENST00000539599 SMAD1Q15797 465 aaKnown RBP14.78□□□□□ -0.04
UBE3B-210ENST00000539599 ATF7IP2Q5U623 682 aa14.78□□□□□ -0.04
UBE3B-210ENST00000539599 TRNP1Q6NT89 227 aa14.78□□□□□ -0.04
UBE3B-210ENST00000539599 RFX6Q8HWS3 928 aa14.78□□□□□ -0.04
UBE3B-210ENST00000539599 C1orf127Q8N9H9 656 aa14.78□□□□□ -0.04
UBE3B-210ENST00000539599 FBXO36Q8NEA4 188 aa14.78□□□□□ -0.04
UBE3B-210ENST00000539599 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.78□□□□□ -0.04
UBE3B-210ENST00000539599 TACO1Q9BSH4 297 aaKnown RBP14.78□□□□□ -0.04
UBE3B-210ENST00000539599 ELOVL4Q9GZR5 314 aa14.78□□□□□ -0.04
UBE3B-210ENST00000539599 SPATC1LQ9H0A9 340 aa14.78□□□□□ -0.04
UBE3B-210ENST00000539599 ELP3Q9H9T3 547 aa14.78□□□□□ -0.04
UBE3B-210ENST00000539599 SLC17A7Q9P2U7 560 aa14.78□□□□□ -0.04
UBE3B-210ENST00000539599 NR2E3Q9Y5X4 410 aa14.78□□□□□ -0.04
UBE3B-210ENST00000539599 PAPPA2Q9BXP8 1791 aa14.77□□□□□ -0.04
UBE3B-210ENST00000539599 F5H423 210 aaPredicted RBP14.77□□□□□ -0.04
UBE3B-210ENST00000539599 FZD9O00144 591 aa14.77□□□□□ -0.04
UBE3B-210ENST00000539599 TCEA3O75764 348 aa14.77□□□□□ -0.04
UBE3B-210ENST00000539599 RAD23BP54727 409 aa14.77□□□□□ -0.04
UBE3B-210ENST00000539599 HIF1AQ16665 826 aa14.77□□□□□ -0.04
UBE3B-210ENST00000539599 SGSM1Q2NKQ1 1148 aa14.77□□□□□ -0.04
UBE3B-210ENST00000539599 C12orf29Q8N999 325 aa14.77□□□□□ -0.04
UBE3B-210ENST00000539599 NETO2Q8NC67 525 aa14.77□□□□□ -0.04
UBE3B-210ENST00000539599 SLC35B2Q8TB61 432 aa14.77□□□□□ -0.04
UBE3B-210ENST00000539599 FBF1Q8TES7 1133 aa14.77□□□□□ -0.04
UBE3B-210ENST00000539599 GPR20Q99678 358 aa14.77□□□□□ -0.04
UBE3B-210ENST00000539599 CDT1Q9H211 546 aa14.77□□□□□ -0.04
UBE3B-210ENST00000539599 RNPEPQ9H4A4 650 aa14.77□□□□□ -0.04
UBE3B-210ENST00000539599 GINM1Q9NU53 330 aa14.77□□□□□ -0.04
UBE3B-210ENST00000539599 SIP14410 1827 aa14.77□□□□□ -0.05
UBE3B-210ENST00000539599 C2orf71A6NGG8 1288 aa14.77□□□□□ -0.05
UBE3B-210ENST00000539599 FAM155BO75949 473 aa14.77□□□□□ -0.05
UBE3B-210ENST00000539599 MIPP30301 263 aa14.77□□□□□ -0.05
UBE3B-210ENST00000539599 CETN2P41208 172 aa14.77□□□□□ -0.05
UBE3B-210ENST00000539599 RGS7P49802 495 aa14.77□□□□□ -0.05
UBE3B-210ENST00000539599 JADE1Q6IE81 842 aa14.77□□□□□ -0.05
UBE3B-210ENST00000539599 LVRNQ6Q4G3 990 aa14.77□□□□□ -0.05
UBE3B-210ENST00000539599 NLGN2Q8NFZ4 835 aa14.77□□□□□ -0.05
UBE3B-210ENST00000539599 FGD4Q96M96 766 aa14.77□□□□□ -0.05
UBE3B-210ENST00000539599 HAO1Q9UJM8 370 aa14.77□□□□□ -0.05
UBE3B-210ENST00000539599 DCTN4Q9UJW0 460 aa14.77□□□□□ -0.05
UBE3B-210ENST00000539599 CHKBQ9Y259 395 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms