RNA–Protein interactions for RNA: ENST00000539442.1

LEMD3-202, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 932 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-202ENST00000539442 CTNNBL1Q8WYA6 563 aaPredicted RBP11.29□□□□□ -0.6
LEMD3-202ENST00000539442 VCPIP1Q96JH7 1222 aa11.29□□□□□ -0.6
LEMD3-202ENST00000539442 HNRNPABQ99729 332 aaKnown RBP11.29□□□□□ -0.6
LEMD3-202ENST00000539442 RTP3Q9BQQ7 232 aa11.29□□□□□ -0.6
LEMD3-202ENST00000539442 GPR62Q9BZJ7 368 aa11.29□□□□□ -0.6
LEMD3-202ENST00000539442 FAM49BQ9NUQ9 324 aa11.29□□□□□ -0.6
LEMD3-202ENST00000539442 TAS2R14Q9NYV8 317 aa11.29□□□□□ -0.6
LEMD3-202ENST00000539442 TSC2P49815 1807 aa11.29□□□□□ -0.6
LEMD3-202ENST00000539442 A0A0A6YYK5 440 aaPredicted RBP11.28□□□□□ -0.6
LEMD3-202ENST00000539442 OR6C75A6NL08 312 aa11.28□□□□□ -0.6
LEMD3-202ENST00000539442 USP27XA6NNY8 438 aa11.28□□□□□ -0.6
LEMD3-202ENST00000539442 TMCO5BA8MYB1 307 aa11.28□□□□□ -0.6
LEMD3-202ENST00000539442 NT5C1B-RDH14C9J2C7 533 aa11.28□□□□□ -0.6
LEMD3-202ENST00000539442 H7C4K7 107 aa11.28□□□□□ -0.6
LEMD3-202ENST00000539442 TLL1O43897 1013 aa11.28□□□□□ -0.6
LEMD3-202ENST00000539442 FTLP02792 175 aaPredicted RBP11.28□□□□□ -0.6
LEMD3-202ENST00000539442 SOD2P04179 222 aa11.28□□□□□ -0.6
LEMD3-202ENST00000539442 TUBB4AP04350 444 aa11.28□□□□□ -0.6
LEMD3-202ENST00000539442 CFHP08603 1231 aa11.28□□□□□ -0.6
LEMD3-202ENST00000539442 MMP8P22894 467 aa11.28□□□□□ -0.6
LEMD3-202ENST00000539442 ACAT1P24752 427 aaKnown RBP11.28□□□□□ -0.6
LEMD3-202ENST00000539442 PBX3P40426 434 aa11.28□□□□□ -0.6
LEMD3-202ENST00000539442 ARHGAP25P42331 645 aa11.28□□□□□ -0.6
LEMD3-202ENST00000539442 GPD2P43304 727 aa11.28□□□□□ -0.6
LEMD3-202ENST00000539442 BCAT1P54687 386 aa11.28□□□□□ -0.6
LEMD3-202ENST00000539442 GALCP54803 685 aa11.28□□□□□ -0.6
LEMD3-202ENST00000539442 PSMC1P62191 440 aaKnown RBP11.28□□□□□ -0.6
LEMD3-202ENST00000539442 PLCB3Q01970 1234 aa11.28□□□□□ -0.6
LEMD3-202ENST00000539442 BST2Q10589 180 aaKnown RBP11.28□□□□□ -0.6
LEMD3-202ENST00000539442 GOLGA7BQ2TAP0 167 aa11.28□□□□□ -0.6
LEMD3-202ENST00000539442 USP41Q3LFD5 358 aa11.28□□□□□ -0.6
LEMD3-202ENST00000539442 PKDCCQ504Y2 493 aa11.28□□□□□ -0.6
LEMD3-202ENST00000539442 MDH1BQ5I0G3 518 aa11.28□□□□□ -0.6
LEMD3-202ENST00000539442 DENND1BQ6P3S1 775 aa11.28□□□□□ -0.6
LEMD3-202ENST00000539442 FAM171BQ6P995 826 aa11.28□□□□□ -0.6
LEMD3-202ENST00000539442 TMEM173Q86WV6 379 aaPredicted RBP11.28□□□□□ -0.6
LEMD3-202ENST00000539442 PASD1Q8IV76 773 aa11.28□□□□□ -0.6
LEMD3-202ENST00000539442 DCP1BQ8IZD4 617 aaKnown RBP11.28□□□□□ -0.6
LEMD3-202ENST00000539442 ANKRD52Q8NB46 1076 aa11.28□□□□□ -0.6
LEMD3-202ENST00000539442 C1orf131Q8NDD1 294 aaKnown RBP11.28□□□□□ -0.6
LEMD3-202ENST00000539442 MYCBPAPQ8TBZ2 947 aa11.28□□□□□ -0.6
LEMD3-202ENST00000539442 STK32AQ8WU08 396 aa11.28□□□□□ -0.6
LEMD3-202ENST00000539442 BCL7CQ8WUZ0 217 aaPredicted RBP11.28□□□□□ -0.6
LEMD3-202ENST00000539442 CLP1Q92989 425 aaKnown RBP11.28□□□□□ -0.6
LEMD3-202ENST00000539442 TMEM169Q96HH4 297 aa11.28□□□□□ -0.6
LEMD3-202ENST00000539442 CALR3Q96L12 384 aaKnown RBP11.28□□□□□ -0.6
LEMD3-202ENST00000539442 NOX5Q96PH1 765 aa11.28□□□□□ -0.6
LEMD3-202ENST00000539442 PKMYT1Q99640 499 aa11.28□□□□□ -0.6
LEMD3-202ENST00000539442 TTPALQ9BTX7 342 aa11.28□□□□□ -0.6
LEMD3-202ENST00000539442 HERC2P3Q9BVR0 1158 aa11.28□□□□□ -0.6
LEMD3-202ENST00000539442 PACSIN1Q9BY11 444 aa11.28□□□□□ -0.6
LEMD3-202ENST00000539442 LACRTQ9GZZ8 138 aa11.28□□□□□ -0.6
LEMD3-202ENST00000539442 MIS12Q9H081 205 aa11.28□□□□□ -0.6
LEMD3-202ENST00000539442 LZTFL1Q9NQ48 299 aa11.28□□□□□ -0.6
LEMD3-202ENST00000539442 CRTAC1Q9NQ79 661 aa11.28□□□□□ -0.6
LEMD3-202ENST00000539442 SPG21Q9NZD8 308 aa11.28□□□□□ -0.6
LEMD3-202ENST00000539442 GTF3C4Q9UKN8 822 aa11.28□□□□□ -0.6
LEMD3-202ENST00000539442 RWDD3Q9Y3V2 267 aa11.28□□□□□ -0.6
LEMD3-202ENST00000539442 PCDHB12Q9Y5F1 795 aa11.28□□□□□ -0.6
LEMD3-202ENST00000539442 NCANO14594 1321 aa11.28□□□□□ -0.6
LEMD3-202ENST00000539442 PTPRSQ13332 1948 aa11.27□□□□□ -0.6
LEMD3-202ENST00000539442 RCCD1A6NED2 376 aa11.27□□□□□ -0.61
LEMD3-202ENST00000539442 KIF2AO00139 706 aaPredicted RBP11.27□□□□□ -0.61
LEMD3-202ENST00000539442 CALB1P05937 261 aa11.27□□□□□ -0.61
LEMD3-202ENST00000539442 LINC00271P0C7V0 271 aa11.27□□□□□ -0.61
LEMD3-202ENST00000539442 CCDC130P13994 396 aa11.27□□□□□ -0.61
LEMD3-202ENST00000539442 GSCP56915 257 aaPredicted RBP11.27□□□□□ -0.61
LEMD3-202ENST00000539442 SLC8A3P57103 927 aa11.27□□□□□ -0.61
LEMD3-202ENST00000539442 SNX16P57768 344 aa11.27□□□□□ -0.61
LEMD3-202ENST00000539442 GPC5P78333 572 aa11.27□□□□□ -0.61
LEMD3-202ENST00000539442 SMARCB1Q12824 385 aa11.27□□□□□ -0.61
LEMD3-202ENST00000539442 TCEAL1Q15170 157 aa11.27□□□□□ -0.61
LEMD3-202ENST00000539442 LIN9Q5TKA1 542 aa11.27□□□□□ -0.61
LEMD3-202ENST00000539442 KIAA0319Q5VV43 1072 aa11.27□□□□□ -0.61
LEMD3-202ENST00000539442 C4orf50Q6ZRC1 276 aa11.27□□□□□ -0.61
LEMD3-202ENST00000539442 MON1BQ7L1V2 547 aa11.27□□□□□ -0.61
LEMD3-202ENST00000539442 DDX53Q86TM3 631 aaKnown RBP11.27□□□□□ -0.61
LEMD3-202ENST00000539442 FAM35AQ86V20 835 aa11.27□□□□□ -0.61
LEMD3-202ENST00000539442 TTC30AQ86WT1 665 aa11.27□□□□□ -0.61
LEMD3-202ENST00000539442 CEP57Q86XR8 500 aa11.27□□□□□ -0.61
LEMD3-202ENST00000539442 RHOT2Q8IXI1 618 aa11.27□□□□□ -0.61
LEMD3-202ENST00000539442 GPR65Q8IYL9 337 aa11.27□□□□□ -0.61
LEMD3-202ENST00000539442 MCOLN2Q8IZK6 566 aa11.27□□□□□ -0.61
LEMD3-202ENST00000539442 FUKQ8N0W3 1084 aa11.27□□□□□ -0.61
LEMD3-202ENST00000539442 RNF10Q8N5U6 811 aaKnown RBP11.27□□□□□ -0.61
LEMD3-202ENST00000539442 OR10T2Q8NGX3 314 aa11.27□□□□□ -0.61
LEMD3-202ENST00000539442 SLC2A14Q8TDB8 520 aa11.27□□□□□ -0.61
LEMD3-202ENST00000539442 CPA5Q8WXQ8 436 aa11.27□□□□□ -0.61
LEMD3-202ENST00000539442 PIK3R5Q8WYR1 880 aa11.27□□□□□ -0.61
LEMD3-202ENST00000539442 RFFLQ8WZ73 363 aa11.27□□□□□ -0.61
LEMD3-202ENST00000539442 RNPC3Q96LT9 517 aaKnown RBP11.27□□□□□ -0.61
LEMD3-202ENST00000539442 ZCWPW1Q9H0M4 648 aa11.27□□□□□ -0.61
LEMD3-202ENST00000539442 THAP2Q9H0W7 228 aa11.27□□□□□ -0.61
LEMD3-202ENST00000539442 CYLDQ9NQC7 956 aa11.27□□□□□ -0.61
LEMD3-202ENST00000539442 AVENQ9NQS1 362 aaPredicted RBP11.27□□□□□ -0.61
LEMD3-202ENST00000539442 CHST7Q9NS84 486 aa11.27□□□□□ -0.61
LEMD3-202ENST00000539442 MYO1AQ9UBC5 1043 aa11.27□□□□□ -0.61
LEMD3-202ENST00000539442 STRIP2Q9ULQ0 834 aa11.27□□□□□ -0.61
LEMD3-202ENST00000539442 BACE2Q9Y5Z0 518 aa11.27□□□□□ -0.61
LEMD3-202ENST00000539442 MKI67P46013 3256 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms