RNA–Protein interactions for RNA: ENST00000538886.5

GGA3-202, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene GGA3, Length 3,766 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-202ENST00000538886 CTTNBP2NLQ9P2B4 639 aa9.29□□□□□ -0.92
GGA3-202ENST00000538886 HIDE1A8MVS5 230 aa9.28□□□□□ -0.92
GGA3-202ENST00000538886 C8AP07357 584 aa9.28□□□□□ -0.92
GGA3-202ENST00000538886 TBXAS1P24557 533 aaPredicted RBP9.28□□□□□ -0.92
GGA3-202ENST00000538886 ERVFC1P60507 584 aa9.28□□□□□ -0.92
GGA3-202ENST00000538886 SNRPFP62306 86 aaKnown RBP9.28□□□□□ -0.92
GGA3-202ENST00000538886 NME3Q13232 169 aa9.28□□□□□ -0.92
GGA3-202ENST00000538886 FAM187BQ17R55 369 aa9.28□□□□□ -0.92
GGA3-202ENST00000538886 RTP2Q5QGT7 225 aa9.28□□□□□ -0.92
GGA3-202ENST00000538886 C1orf53Q5VUE5 145 aa9.28□□□□□ -0.92
GGA3-202ENST00000538886 TRIM65Q6PJ69 517 aa9.28□□□□□ -0.92
GGA3-202ENST00000538886 OTUD6BQ8N6M0 293 aa9.28□□□□□ -0.92
GGA3-202ENST00000538886 KREMEN2Q8NCW0 462 aa9.28□□□□□ -0.92
GGA3-202ENST00000538886 SLC22A17Q8WUG5 538 aa9.28□□□□□ -0.92
GGA3-202ENST00000538886 RSPH1Q8WYR4 309 aa9.28□□□□□ -0.92
GGA3-202ENST00000538886 CASD1Q96PB1 797 aa9.28□□□□□ -0.92
GGA3-202ENST00000538886 FIZ1Q96SL8 496 aa9.28□□□□□ -0.92
GGA3-202ENST00000538886 APEX2Q9UBZ4 518 aa9.28□□□□□ -0.92
GGA3-202ENST00000538886 RWDD3Q9Y3V2 267 aa9.28□□□□□ -0.92
GGA3-202ENST00000538886 PCDHB5Q9Y5E4 795 aa9.28□□□□□ -0.92
GGA3-202ENST00000538886 ATP8B3O60423 1300 aa9.28□□□□□ -0.92
GGA3-202ENST00000538886 GREB1LQ9C091 1923 aaPredicted RBP9.28□□□□□ -0.92
GGA3-202ENST00000538886 FAM237AA0A1B0GTK4 181 aa9.28□□□□□ -0.92
GGA3-202ENST00000538886 FOXN3O00409 490 aaPredicted RBP9.28□□□□□ -0.92
GGA3-202ENST00000538886 IKBKBO14920 756 aa9.28□□□□□ -0.92
GGA3-202ENST00000538886 RHOXF2BP0C7M4 288 aa9.28□□□□□ -0.92
GGA3-202ENST00000538886 AVPR1AP37288 418 aa9.28□□□□□ -0.92
GGA3-202ENST00000538886 LHX1P48742 406 aa9.28□□□□□ -0.92
GGA3-202ENST00000538886 ACTN3Q08043 901 aaPredicted RBP9.28□□□□□ -0.92
GGA3-202ENST00000538886 RBL2Q08999 1139 aa9.28□□□□□ -0.92
GGA3-202ENST00000538886 GOLGA7BQ2TAP0 167 aa9.28□□□□□ -0.92
GGA3-202ENST00000538886 ATAT1Q5SQI0 421 aa9.28□□□□□ -0.92
GGA3-202ENST00000538886 CCDC122Q5T0U0 273 aa9.28□□□□□ -0.92
GGA3-202ENST00000538886 NAA35Q5VZE5 725 aa9.28□□□□□ -0.92
GGA3-202ENST00000538886 DHX40Q8IX18 779 aaKnown RBP9.28□□□□□ -0.92
GGA3-202ENST00000538886 MCRS1Q96EZ8 462 aa9.28□□□□□ -0.92
GGA3-202ENST00000538886 SLITRK1Q96PX8 696 aa9.28□□□□□ -0.92
GGA3-202ENST00000538886 GDF15Q99988 308 aa9.28□□□□□ -0.92
GGA3-202ENST00000538886 RHOXF2Q9BQY4 288 aa9.28□□□□□ -0.92
GGA3-202ENST00000538886 SIK2Q9H0K1 926 aa9.28□□□□□ -0.92
GGA3-202ENST00000538886 NGRNQ9NPE2 291 aaKnown RBP9.28□□□□□ -0.92
GGA3-202ENST00000538886 L1RE1Q9UN81 338 aa9.28□□□□□ -0.92
GGA3-202ENST00000538886 PCDHA11Q9Y5I1 949 aa9.28□□□□□ -0.92
GGA3-202ENST00000538886 SPTBN2O15020 2390 aa9.28□□□□□ -0.92
GGA3-202ENST00000538886 MYBPHLA2RUH7 354 aa9.28□□□□□ -0.92
GGA3-202ENST00000538886 SASH3O75995 380 aa9.28□□□□□ -0.92
GGA3-202ENST00000538886 EZRP15311 586 aaKnown RBP9.28□□□□□ -0.92
GGA3-202ENST00000538886 UCHL3P15374 230 aa9.28□□□□□ -0.92
GGA3-202ENST00000538886 E2F5Q15329 346 aa9.28□□□□□ -0.92
GGA3-202ENST00000538886 NFE2Q16621 373 aaPredicted RBP9.28□□□□□ -0.92
GGA3-202ENST00000538886 SWT1Q5T5J6 900 aaKnown RBP9.28□□□□□ -0.92
GGA3-202ENST00000538886 PDZD4Q76G19 769 aaPredicted RBP9.28□□□□□ -0.92
GGA3-202ENST00000538886 ERICH1Q86X53 443 aa9.28□□□□□ -0.92
GGA3-202ENST00000538886 PHOSPHO2Q8TCD6 241 aa9.28□□□□□ -0.92
GGA3-202ENST00000538886 TMC2Q8TDI7 906 aa9.28□□□□□ -0.92
GGA3-202ENST00000538886 SEMA4DQ92854 862 aa9.28□□□□□ -0.92
GGA3-202ENST00000538886 FBXO32Q969P5 355 aa9.28□□□□□ -0.92
GGA3-202ENST00000538886 LOC285556D6RIA3 1793 aa9.28□□□□□ -0.92
GGA3-202ENST00000538886 ZNF646O15015 1829 aaPredicted RBP9.28□□□□□ -0.92
GGA3-202ENST00000538886 PTPRJQ12913 1337 aa9.28□□□□□ -0.92
GGA3-202ENST00000538886 LRRC53A6NM62 1247 aa9.27□□□□□ -0.92
GGA3-202ENST00000538886 ENO4A6NNW6 628 aa9.27□□□□□ -0.92
GGA3-202ENST00000538886 LGALS16A8MUM7 142 aa9.27□□□□□ -0.92
GGA3-202ENST00000538886 DAPK3O43293 454 aa9.27□□□□□ -0.92
GGA3-202ENST00000538886 ATP11AP98196 1134 aa9.27□□□□□ -0.92
GGA3-202ENST00000538886 TAP1Q03518 808 aa9.27□□□□□ -0.92
GGA3-202ENST00000538886 MAP9Q49MG5 647 aa9.27□□□□□ -0.92
GGA3-202ENST00000538886 BTBD8Q5XKL5 378 aa9.27□□□□□ -0.92
GGA3-202ENST00000538886 CRELD2Q6UXH1 353 aaPredicted RBP9.27□□□□□ -0.92
GGA3-202ENST00000538886 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.27□□□□□ -0.92
GGA3-202ENST00000538886 ARHGEF19Q8IW93 802 aa9.27□□□□□ -0.92
GGA3-202ENST00000538886 EDEM1Q92611 657 aa9.27□□□□□ -0.92
GGA3-202ENST00000538886 DPEP3Q9H4B8 488 aa9.27□□□□□ -0.92
GGA3-202ENST00000538886 FAM204AQ9H8W3 233 aa9.27□□□□□ -0.92
GGA3-202ENST00000538886 DSEQ9UL01 958 aa9.27□□□□□ -0.92
GGA3-202ENST00000538886 TTLL3Q9Y4R7 772 aa9.27□□□□□ -0.92
GGA3-202ENST00000538886 TEX28O15482 410 aa9.27□□□□□ -0.93
GGA3-202ENST00000538886 MED7O43513 233 aa9.27□□□□□ -0.93
GGA3-202ENST00000538886 PTPN1P18031 435 aaKnown RBP9.27□□□□□ -0.93
GGA3-202ENST00000538886 BPIFB4P59827 614 aa9.27□□□□□ -0.93
GGA3-202ENST00000538886 IRX1P78414 480 aaPredicted RBP9.27□□□□□ -0.93
GGA3-202ENST00000538886 ZACNQ401N2 412 aa9.27□□□□□ -0.93
GGA3-202ENST00000538886 C10orf120Q5SQS8 335 aa9.27□□□□□ -0.93
GGA3-202ENST00000538886 LRRC55Q6ZSA7 311 aa9.27□□□□□ -0.93
GGA3-202ENST00000538886 EPM2AIP1Q7L775 607 aaPredicted RBP9.27□□□□□ -0.93
GGA3-202ENST00000538886 CMTR2Q8IYT2 770 aaKnown RBP9.27□□□□□ -0.93
GGA3-202ENST00000538886 C3orf58Q8NDZ4 430 aa9.27□□□□□ -0.93
GGA3-202ENST00000538886 CTNNBL1Q8WYA6 563 aaPredicted RBP9.27□□□□□ -0.93
GGA3-202ENST00000538886 ZNF516Q92618 1163 aa9.27□□□□□ -0.93
GGA3-202ENST00000538886 CABS1Q96KC9 395 aa9.27□□□□□ -0.93
GGA3-202ENST00000538886 TMEM209Q96SK2 561 aa9.27□□□□□ -0.93
GGA3-202ENST00000538886 ST6GALNAC4Q9H4F1 302 aa9.27□□□□□ -0.93
GGA3-202ENST00000538886 LZTFL1Q9NQ48 299 aa9.27□□□□□ -0.93
GGA3-202ENST00000538886 MRFAP1Q9Y605 127 aa9.27□□□□□ -0.93
GGA3-202ENST00000538886 XYLBO75191 536 aa9.27□□□□□ -0.93
GGA3-202ENST00000538886 CNPP09543 421 aaKnown RBP9.27□□□□□ -0.93
GGA3-202ENST00000538886 GSDMDP57764 484 aa9.27□□□□□ -0.93
GGA3-202ENST00000538886 TCEAL5Q5H9L2 206 aa9.27□□□□□ -0.93
GGA3-202ENST00000538886 FAM26DQ5JW98 314 aa9.27□□□□□ -0.93
GGA3-202ENST00000538886 HDXQ7Z353 690 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms