RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 USP17L6PQ6QN14 398 aa9.46□□□□□ -0.89
SNHG1-209ENST00000538654 C1orf186Q6ZWK4 172 aa9.46□□□□□ -0.89
SNHG1-209ENST00000538654 LRRC6Q86X45 466 aa9.46□□□□□ -0.89
SNHG1-209ENST00000538654 CHSY1Q86X52 802 aa9.46□□□□□ -0.89
SNHG1-209ENST00000538654 CPNE8Q86YQ8 564 aa9.46□□□□□ -0.89
SNHG1-209ENST00000538654 TMEM174Q8WUU8 243 aa9.46□□□□□ -0.89
SNHG1-209ENST00000538654 CRYGNQ8WXF5 182 aa9.46□□□□□ -0.89
SNHG1-209ENST00000538654 SH3KBP1Q96B97 665 aa9.46□□□□□ -0.89
SNHG1-209ENST00000538654 OXNAD1Q96HP4 312 aaPredicted RBP9.46□□□□□ -0.89
SNHG1-209ENST00000538654 MAML3Q96JK9 1138 aa9.46□□□□□ -0.89
SNHG1-209ENST00000538654 GMLQ99445 158 aa9.46□□□□□ -0.89
SNHG1-209ENST00000538654 MAK16Q9BXY0 300 aaKnown RBP9.46□□□□□ -0.89
SNHG1-209ENST00000538654 PTTG2Q9NZH5 202 aa9.46□□□□□ -0.89
SNHG1-209ENST00000538654 ROBO1Q9Y6N7 1651 aa9.46□□□□□ -0.89
SNHG1-209ENST00000538654 IGKV6D-41A0A0C4DH26 115 aa9.46□□□□□ -0.9
SNHG1-209ENST00000538654 B2RBV5 119 aa9.46□□□□□ -0.9
SNHG1-209ENST00000538654 USP17L10C9JJH3 530 aa9.46□□□□□ -0.9
SNHG1-209ENST00000538654 IPO5O00410 1097 aaKnown RBP9.46□□□□□ -0.9
SNHG1-209ENST00000538654 PFDN1O60925 122 aa9.46□□□□□ -0.9
SNHG1-209ENST00000538654 TM7SF2O76062 418 aa9.46□□□□□ -0.9
SNHG1-209ENST00000538654 RALAP11233 206 aa9.46□□□□□ -0.9
SNHG1-209ENST00000538654 VAV1P15498 845 aa9.46□□□□□ -0.9
SNHG1-209ENST00000538654 ADRA1DP25100 572 aa9.46□□□□□ -0.9
SNHG1-209ENST00000538654 ZNF76P36508 570 aa9.46□□□□□ -0.9
SNHG1-209ENST00000538654 MAPK8P45983 427 aa9.46□□□□□ -0.9
SNHG1-209ENST00000538654 IRX4P78413 519 aa9.46□□□□□ -0.9
SNHG1-209ENST00000538654 TSPY1Q01534 308 aa9.46□□□□□ -0.9
SNHG1-209ENST00000538654 CYP4A11Q02928 519 aa9.46□□□□□ -0.9
SNHG1-209ENST00000538654 OVGP1Q12889 678 aa9.46□□□□□ -0.9
SNHG1-209ENST00000538654 CDC16Q13042 620 aa9.46□□□□□ -0.9
SNHG1-209ENST00000538654 USP4Q13107 963 aa9.46□□□□□ -0.9
SNHG1-209ENST00000538654 ALCAMQ13740 583 aa9.46□□□□□ -0.9
SNHG1-209ENST00000538654 GRM2Q14416 872 aa9.46□□□□□ -0.9
SNHG1-209ENST00000538654 DBN1Q16643 649 aa9.46□□□□□ -0.9
SNHG1-209ENST00000538654 CCDC142Q17RM4 750 aa9.46□□□□□ -0.9
SNHG1-209ENST00000538654 KLHL38Q2WGJ6 581 aa9.46□□□□□ -0.9
SNHG1-209ENST00000538654 KLC3Q6P597 504 aa9.46□□□□□ -0.9
SNHG1-209ENST00000538654 NSMFQ6X4W1 530 aa9.46□□□□□ -0.9
SNHG1-209ENST00000538654 OGFOD1Q8N543 542 aa9.46□□□□□ -0.9
SNHG1-209ENST00000538654 SHC3Q92529 594 aa9.46□□□□□ -0.9
SNHG1-209ENST00000538654 DYDC2Q96IM9 177 aa9.46□□□□□ -0.9
SNHG1-209ENST00000538654 SHOC2Q9UQ13 582 aa9.46□□□□□ -0.9
SNHG1-209ENST00000538654 R3HDM2Q9Y2K5 976 aaKnown RBP9.46□□□□□ -0.9
SNHG1-209ENST00000538654 PCDHGB3Q9Y5G1 929 aa9.46□□□□□ -0.9
SNHG1-209ENST00000538654 PCDHA1Q9Y5I3 950 aa9.46□□□□□ -0.9
SNHG1-209ENST00000538654 NUMBLQ9Y6R0 609 aa9.46□□□□□ -0.9
SNHG1-209ENST00000538654 IRS2Q9Y4H2 1338 aa9.46□□□□□ -0.9
SNHG1-209ENST00000538654 TAF1LQ8IZX4 1826 aa9.46□□□□□ -0.9
SNHG1-209ENST00000538654 MYH11P35749 1972 aa9.46□□□□□ -0.9
SNHG1-209ENST00000538654 A0A1W2PPM1 405 aa9.46□□□□□ -0.9
SNHG1-209ENST00000538654 FCHO1O14526 889 aa9.46□□□□□ -0.9
SNHG1-209ENST00000538654 CYP26A1O43174 497 aa9.46□□□□□ -0.9
SNHG1-209ENST00000538654 FGFR1P11362 822 aa9.46□□□□□ -0.9
SNHG1-209ENST00000538654 CYP11B1P15538 503 aa9.46□□□□□ -0.9
SNHG1-209ENST00000538654 AMPD1P23109 780 aa9.46□□□□□ -0.9
SNHG1-209ENST00000538654 ADSSP30520 456 aa9.46□□□□□ -0.9
SNHG1-209ENST00000538654 LLGL1Q15334 1064 aa9.46□□□□□ -0.9
SNHG1-209ENST00000538654 RIPOR1Q6ZS17 1223 aa9.46□□□□□ -0.9
SNHG1-209ENST00000538654 RHOT1Q8IXI2 618 aa9.46□□□□□ -0.9
SNHG1-209ENST00000538654 DGCR14Q96DF8 476 aaKnown RBP9.46□□□□□ -0.9
SNHG1-209ENST00000538654 NYXQ9GZU5 481 aa9.46□□□□□ -0.9
SNHG1-209ENST00000538654 OCEL1Q9H607 264 aa9.46□□□□□ -0.9
SNHG1-209ENST00000538654 TMEM206Q9H813 350 aa9.46□□□□□ -0.9
SNHG1-209ENST00000538654 VAV3Q9UKW4 847 aa9.46□□□□□ -0.9
SNHG1-209ENST00000538654 LOXHD1Q8IVV2 1947 aa9.46□□□□□ -0.9
SNHG1-209ENST00000538654 BAG2O95816 211 aa9.45□□□□□ -0.9
SNHG1-209ENST00000538654 DLDP09622 509 aaKnown RBP9.45□□□□□ -0.9
SNHG1-209ENST00000538654 POU3F3P20264 500 aaPredicted RBP9.45□□□□□ -0.9
SNHG1-209ENST00000538654 OSBPP22059 807 aa9.45□□□□□ -0.9
SNHG1-209ENST00000538654 TPP2P29144 1249 aaPredicted RBP9.45□□□□□ -0.9
SNHG1-209ENST00000538654 CIITAP33076 1130 aa9.45□□□□□ -0.9
SNHG1-209ENST00000538654 CLCN2P51788 898 aa9.45□□□□□ -0.9
SNHG1-209ENST00000538654 DRICH1Q6PGQ1 229 aaPredicted RBP9.45□□□□□ -0.9
SNHG1-209ENST00000538654 KYAT3Q6YP21 454 aaKnown RBP9.45□□□□□ -0.9
SNHG1-209ENST00000538654 SLC47A2Q86VL8 602 aa9.45□□□□□ -0.9
SNHG1-209ENST00000538654 RASSF3Q86WH2 238 aa9.45□□□□□ -0.9
SNHG1-209ENST00000538654 KATNAL2Q8IYT4 538 aa9.45□□□□□ -0.9
SNHG1-209ENST00000538654 ALDH16A1Q8IZ83 802 aa9.45□□□□□ -0.9
SNHG1-209ENST00000538654 ZNF276Q8N554 614 aa9.45□□□□□ -0.9
SNHG1-209ENST00000538654 OR6Y1Q8NGX8 325 aa9.45□□□□□ -0.9
SNHG1-209ENST00000538654 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.45□□□□□ -0.9
SNHG1-209ENST00000538654 TCP10LQ8TDR4 215 aa9.45□□□□□ -0.9
SNHG1-209ENST00000538654 GFM2Q969S9 779 aaKnown RBP9.45□□□□□ -0.9
SNHG1-209ENST00000538654 CATSPER2Q96P56 530 aa9.45□□□□□ -0.9
SNHG1-209ENST00000538654 KCNK13Q9HB14 408 aa9.45□□□□□ -0.9
SNHG1-209ENST00000538654 KCNK4Q9NYG8 393 aa9.45□□□□□ -0.9
SNHG1-209ENST00000538654 RABL2AQ9UBK7 228 aaPredicted RBP9.45□□□□□ -0.9
SNHG1-209ENST00000538654 VTI1BQ9UEU0 232 aa9.45□□□□□ -0.9
SNHG1-209ENST00000538654 FOCADQ5VW36 1801 aa9.45□□□□□ -0.9
SNHG1-209ENST00000538654 WDR91A4D1P6 747 aa9.45□□□□□ -0.9
SNHG1-209ENST00000538654 SPECC1L-ADORA2AF8WAN1 911 aa9.45□□□□□ -0.9
SNHG1-209ENST00000538654 BOLA2-SMG1P6H3BVE0 249 aa9.45□□□□□ -0.9
SNHG1-209ENST00000538654 ITGA2BP08514 1039 aa9.45□□□□□ -0.9
SNHG1-209ENST00000538654 SREBF1P36956 1147 aa9.45□□□□□ -0.9
SNHG1-209ENST00000538654 PPM1FP49593 454 aaPredicted RBP9.45□□□□□ -0.9
SNHG1-209ENST00000538654 MXI1P50539 228 aa9.45□□□□□ -0.9
SNHG1-209ENST00000538654 USP46P62068 366 aa9.45□□□□□ -0.9
SNHG1-209ENST00000538654 PRKD1Q15139 912 aaPredicted RBP9.45□□□□□ -0.9
SNHG1-209ENST00000538654 CLEC16AQ2KHT3 1053 aa9.45□□□□□ -0.9
SNHG1-209ENST00000538654 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.45□□□□□ -0.92e-12■■□□□ 11.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms