RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 DNAJC17Q9NVM6 304 aaKnown RBP14.91□□□□□ -0.02
ACTN1-205ENST00000538545 KPNA7A9QM74 516 aa14.91□□□□□ -0.02
ACTN1-205ENST00000538545 MED7O43513 233 aa14.91□□□□□ -0.02
ACTN1-205ENST00000538545 VDRP11473 427 aa14.91□□□□□ -0.02
ACTN1-205ENST00000538545 COILP38432 576 aaPredicted RBP14.91□□□□□ -0.02
ACTN1-205ENST00000538545 RPL21P46778 160 aaKnown RBP14.91□□□□□ -0.02
ACTN1-205ENST00000538545 DYNLT1P63172 113 aa14.91□□□□□ -0.02
ACTN1-205ENST00000538545 KYAT1Q16773 422 aa14.91□□□□□ -0.02
ACTN1-205ENST00000538545 HASPINQ8TF76 798 aa14.91□□□□□ -0.02
ACTN1-205ENST00000538545 PIK3R5Q8WYR1 880 aa14.91□□□□□ -0.02
ACTN1-205ENST00000538545 NAP1L3Q99457 506 aaPredicted RBP14.91□□□□□ -0.02
ACTN1-205ENST00000538545 CYP3A43Q9HB55 503 aa14.91□□□□□ -0.02
ACTN1-205ENST00000538545 IP6K2Q9UHH9 426 aa14.91□□□□□ -0.02
ACTN1-205ENST00000538545 UBQLN1Q9UMX0 589 aaKnown RBP14.91□□□□□ -0.02
ACTN1-205ENST00000538545 PDCD11Q14690 1871 aaKnown RBP14.91□□□□□ -0.02
ACTN1-205ENST00000538545 CASTOR2A6NHX0 329 aa14.9□□□□□ -0.02
ACTN1-205ENST00000538545 M0QZ92 97 aa14.9□□□□□ -0.02
ACTN1-205ENST00000538545 CLDN5O00501 218 aa14.9□□□□□ -0.02
ACTN1-205ENST00000538545 KRT1P04264 644 aa14.9□□□□□ -0.02
ACTN1-205ENST00000538545 ATP11AP98196 1134 aa14.9□□□□□ -0.02
ACTN1-205ENST00000538545 CNGA2Q16280 664 aa14.9□□□□□ -0.02
ACTN1-205ENST00000538545 DNAJC21Q5F1R6 531 aaKnown RBP14.9□□□□□ -0.02
ACTN1-205ENST00000538545 KCTD16Q68DU8 428 aa14.9□□□□□ -0.02
ACTN1-205ENST00000538545 TAF2Q6P1X5 1199 aa14.9□□□□□ -0.02
ACTN1-205ENST00000538545 EMBQ6PCB8 327 aa14.9□□□□□ -0.02
ACTN1-205ENST00000538545 FAM183BPQ6ZVS7 135 aa14.9□□□□□ -0.02
ACTN1-205ENST00000538545 ARL8AQ96BM9 186 aa14.9□□□□□ -0.02
ACTN1-205ENST00000538545 PWWP2AQ96N64 755 aa14.9□□□□□ -0.02
ACTN1-205ENST00000538545 FAM105AQ9NUU6 356 aa14.9□□□□□ -0.02
ACTN1-205ENST00000538545 LRRD1A4D1F6 860 aa14.9□□□□□ -0.02
ACTN1-205ENST00000538545 F8W810 466 aa14.9□□□□□ -0.02
ACTN1-205ENST00000538545 PIRO00625 290 aa14.9□□□□□ -0.02
ACTN1-205ENST00000538545 FSCN2O14926 492 aa14.9□□□□□ -0.02
ACTN1-205ENST00000538545 RNF40O75150 1001 aa14.9□□□□□ -0.02
ACTN1-205ENST00000538545 LRCH4O75427 683 aa14.9□□□□□ -0.02
ACTN1-205ENST00000538545 SLC1A1P43005 524 aa14.9□□□□□ -0.02
ACTN1-205ENST00000538545 CDC42EP1Q00587 391 aa14.9□□□□□ -0.02
ACTN1-205ENST00000538545 IRF5Q13568 498 aa14.9□□□□□ -0.02
ACTN1-205ENST00000538545 UAP1Q16222 522 aaPredicted RBP14.9□□□□□ -0.02
ACTN1-205ENST00000538545 SERINC5Q86VE9 423 aa14.9□□□□□ -0.02
ACTN1-205ENST00000538545 OSTM1Q86WC4 334 aa14.9□□□□□ -0.02
ACTN1-205ENST00000538545 GLIS1Q8NBF1 620 aa14.9□□□□□ -0.02
ACTN1-205ENST00000538545 C3orf58Q8NDZ4 430 aa14.9□□□□□ -0.02
ACTN1-205ENST00000538545 UHMK1Q8TAS1 419 aaKnown RBP14.9□□□□□ -0.02
ACTN1-205ENST00000538545 CCDC114Q96M63 670 aa14.9□□□□□ -0.02
ACTN1-205ENST00000538545 ERP44Q9BS26 406 aa14.9□□□□□ -0.02
ACTN1-205ENST00000538545 MAGEB5Q9BZ81 275 aa14.9□□□□□ -0.02
ACTN1-205ENST00000538545 OSBPL8Q9BZF1 889 aa14.9□□□□□ -0.02
ACTN1-205ENST00000538545 ZNF518BQ9C0D4 1074 aa14.9□□□□□ -0.02
ACTN1-205ENST00000538545 LHX5Q9H2C1 402 aa14.9□□□□□ -0.02
ACTN1-205ENST00000538545 TRPV2Q9Y5S1 764 aa14.9□□□□□ -0.02
ACTN1-205ENST00000538545 RALGAPA2Q2PPJ7 1873 aa14.9□□□□□ -0.02
ACTN1-205ENST00000538545 TFE3P19532 575 aaPredicted RBP14.89□□□□□ -0.03
ACTN1-205ENST00000538545 TNFRSF8P28908 595 aa14.89□□□□□ -0.03
ACTN1-205ENST00000538545 SCNN1GP51170 649 aa14.89□□□□□ -0.03
ACTN1-205ENST00000538545 DUPD1Q68J44 220 aa14.89□□□□□ -0.03
ACTN1-205ENST00000538545 SENP6Q9GZR1 1112 aaPredicted RBP14.89□□□□□ -0.03
ACTN1-205ENST00000538545 CREBZFQ9NS37 354 aa14.89□□□□□ -0.03
ACTN1-205ENST00000538545 PADI3Q9ULW8 664 aa14.89□□□□□ -0.03
ACTN1-205ENST00000538545 POMCP01189 267 aa14.89□□□□□ -0.03
ACTN1-205ENST00000538545 TKTP29401 623 aaKnown RBP14.89□□□□□ -0.03
ACTN1-205ENST00000538545 LILRA4P59901 499 aa14.89□□□□□ -0.03
ACTN1-205ENST00000538545 CTU1Q7Z7A3 348 aaKnown RBP14.89□□□□□ -0.03
ACTN1-205ENST00000538545 CD302Q8IX05 232 aa14.89□□□□□ -0.03
ACTN1-205ENST00000538545 SH2D3CQ8N5H7 860 aa14.89□□□□□ -0.03
ACTN1-205ENST00000538545 LRRN4Q8WUT4 740 aa14.89□□□□□ -0.03
ACTN1-205ENST00000538545 CAVIN3Q969G5 261 aa14.89□□□□□ -0.03
ACTN1-205ENST00000538545 CFAP57Q96MR6 1250 aa14.89□□□□□ -0.03
ACTN1-205ENST00000538545 TRPV6Q9H1D0 765 aa14.89□□□□□ -0.03
ACTN1-205ENST00000538545 ATP8A1Q9Y2Q0 1164 aa14.89□□□□□ -0.03
ACTN1-205ENST00000538545 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.89□□□□□ -0.03
ACTN1-205ENST00000538545 AXLP30530 894 aa14.88□□□□□ -0.03
ACTN1-205ENST00000538545 CLCNKBP51801 687 aa14.88□□□□□ -0.03
ACTN1-205ENST00000538545 ATXN1P54253 815 aaKnown RBP14.88□□□□□ -0.03
ACTN1-205ENST00000538545 CCSAPQ6IQ19 270 aaPredicted RBP14.88□□□□□ -0.03
ACTN1-205ENST00000538545 TAB3Q8N5C8 712 aaPredicted RBP14.88□□□□□ -0.03
ACTN1-205ENST00000538545 UBLCP1Q8WVY7 318 aaPredicted RBP14.88□□□□□ -0.03
ACTN1-205ENST00000538545 HSPH1Q92598 858 aa14.88□□□□□ -0.03
ACTN1-205ENST00000538545 GRHL1Q9NZI5 618 aa14.88□□□□□ -0.03
ACTN1-205ENST00000538545 MTUS1Q9ULD2 1270 aa14.88□□□□□ -0.03
ACTN1-205ENST00000538545 NOD1Q9Y239 953 aa14.88□□□□□ -0.03
ACTN1-205ENST00000538545 INPP5FQ9Y2H2 1132 aa14.88□□□□□ -0.03
ACTN1-205ENST00000538545 SIGLEC16A6NMB1 481 aa14.88□□□□□ -0.03
ACTN1-205ENST00000538545 BHMG1C9JSJ3 638 aaPredicted RBP14.88□□□□□ -0.03
ACTN1-205ENST00000538545 ETS1P14921 441 aa14.88□□□□□ -0.03
ACTN1-205ENST00000538545 CHRNA3P32297 505 aa14.88□□□□□ -0.03
ACTN1-205ENST00000538545 GNL1P36915 607 aaPredicted RBP14.88□□□□□ -0.03
ACTN1-205ENST00000538545 KRT17Q04695 432 aa14.88□□□□□ -0.03
ACTN1-205ENST00000538545 HSP90B2PQ58FF3 399 aa14.88□□□□□ -0.03
ACTN1-205ENST00000538545 WSCD1Q658N2 575 aa14.88□□□□□ -0.03
ACTN1-205ENST00000538545 LCLAT1Q6UWP7 414 aa14.88□□□□□ -0.03
ACTN1-205ENST00000538545 ZDHHC24Q6UX98 284 aa14.88□□□□□ -0.03
ACTN1-205ENST00000538545 AGMOQ6ZNB7 445 aa14.88□□□□□ -0.03
ACTN1-205ENST00000538545 NT5DC4Q86YG4 428 aa14.88□□□□□ -0.03
ACTN1-205ENST00000538545 NME8Q8N427 588 aa14.88□□□□□ -0.03
ACTN1-205ENST00000538545 SLC2A14Q8TDB8 520 aa14.88□□□□□ -0.03
ACTN1-205ENST00000538545 SLITRK1Q96PX8 696 aa14.88□□□□□ -0.03
ACTN1-205ENST00000538545 UPF3AQ9H1J1 476 aaKnown RBP14.88□□□□□ -0.03
ACTN1-205ENST00000538545 GPATCH2LQ9NWQ4 482 aa14.88□□□□□ -0.03
ACTN1-205ENST00000538545 BEST1O76090 585 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms