RNA–Protein interactions for RNA: ENST00000538345.1

DDX11-211, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 498 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-211ENST00000538345 SMYD3Q9H7B4 428 aa13.04□□□□□ -0.32
DDX11-211ENST00000538345 BRD9Q9H8M2 597 aa13.04□□□□□ -0.32
DDX11-211ENST00000538345 ABCB6Q9NP58 842 aa13.04□□□□□ -0.32
DDX11-211ENST00000538345 CDH9Q9ULB4 789 aa13.04□□□□□ -0.32
DDX11-211ENST00000538345 SIT1Q9Y3P8 196 aa13.04□□□□□ -0.32
DDX11-211ENST00000538345 FAM186AA6NE01 2351 aa13.04□□□□□ -0.32
DDX11-211ENST00000538345 KANSL1LA0AUZ9 987 aa13.03□□□□□ -0.32
DDX11-211ENST00000538345 ARNTLO00327 626 aa13.03□□□□□ -0.32
DDX11-211ENST00000538345 CALUO43852 315 aaPredicted RBP13.03□□□□□ -0.32
DDX11-211ENST00000538345 PHACTR2O75167 634 aa13.03□□□□□ -0.32
DDX11-211ENST00000538345 TACC1O75410 805 aa13.03□□□□□ -0.32
DDX11-211ENST00000538345 TADA3O75528 432 aa13.03□□□□□ -0.32
DDX11-211ENST00000538345 STAU1O95793 577 aaKnown RBP13.03□□□□□ -0.32
DDX11-211ENST00000538345 F11P03951 625 aa13.03□□□□□ -0.32
DDX11-211ENST00000538345 CDC25CP30307 473 aa13.03□□□□□ -0.32
DDX11-211ENST00000538345 MRE11P49959 708 aa13.03□□□□□ -0.32
DDX11-211ENST00000538345 NLRP12P59046 1061 aa13.03□□□□□ -0.32
DDX11-211ENST00000538345 TNNC1P63316 161 aa13.03□□□□□ -0.32
DDX11-211ENST00000538345 PRKCQQ04759 706 aa13.03□□□□□ -0.32
DDX11-211ENST00000538345 TRPC3Q13507 836 aa13.03□□□□□ -0.32
DDX11-211ENST00000538345 TAF12Q16514 161 aa13.03□□□□□ -0.32
DDX11-211ENST00000538345 ZCWPW2Q504Y3 356 aa13.03□□□□□ -0.32
DDX11-211ENST00000538345 ARHGAP15Q53QZ3 475 aa13.03□□□□□ -0.32
DDX11-211ENST00000538345 SPATA2LQ8IUW3 424 aaPredicted RBP13.03□□□□□ -0.32
DDX11-211ENST00000538345 MFSD6LQ8IWD5 586 aa13.03□□□□□ -0.32
DDX11-211ENST00000538345 GUF1Q8N442 669 aaKnown RBP13.03□□□□□ -0.32
DDX11-211ENST00000538345 DEPDC1BQ8WUY9 529 aa13.03□□□□□ -0.32
DDX11-211ENST00000538345 DNASE1L2Q92874 299 aa13.03□□□□□ -0.32
DDX11-211ENST00000538345 SYAP1Q96A49 352 aaPredicted RBP13.03□□□□□ -0.32
DDX11-211ENST00000538345 FUBP3Q96I24 572 aaKnown RBP eCLIP13.03□□□□□ -0.32
DDX11-211ENST00000538345 SLC46A2Q9BY10 475 aa13.03□□□□□ -0.32
DDX11-211ENST00000538345 SMG9Q9H0W8 520 aaKnown RBP13.03□□□□□ -0.32
DDX11-211ENST00000538345 VRTNQ9H8Y1 702 aa13.03□□□□□ -0.32
DDX11-211ENST00000538345 NXF1Q9UBU9 619 aaKnown RBP13.03□□□□□ -0.32
DDX11-211ENST00000538345 MAGED2Q9UNF1 606 aaPredicted RBP13.03□□□□□ -0.32
DDX11-211ENST00000538345 ATG2BQ96BY7 2078 aa13.03□□□□□ -0.32
DDX11-211ENST00000538345 MYO16Q9Y6X6 1858 aa13.02□□□□□ -0.32
DDX11-211ENST00000538345 SLC38A8A6NNN8 435 aa13.02□□□□□ -0.33
DDX11-211ENST00000538345 AKAP3O75969 853 aa13.02□□□□□ -0.33
DDX11-211ENST00000538345 NOL4O94818 638 aa13.02□□□□□ -0.33
DDX11-211ENST00000538345 TRIM49P0CI25 452 aa13.02□□□□□ -0.33
DDX11-211ENST00000538345 TRIM49CP0CI26 452 aa13.02□□□□□ -0.33
DDX11-211ENST00000538345 CSH1P0DML2 217 aa13.02□□□□□ -0.33
DDX11-211ENST00000538345 CSH2P0DML3 217 aa13.02□□□□□ -0.33
DDX11-211ENST00000538345 BDNFP23560 247 aa13.02□□□□□ -0.33
DDX11-211ENST00000538345 NR2F2P24468 414 aa13.02□□□□□ -0.33
DDX11-211ENST00000538345 TARSP26639 723 aaKnown RBP13.02□□□□□ -0.33
DDX11-211ENST00000538345 ATICP31939 592 aa13.02□□□□□ -0.33
DDX11-211ENST00000538345 GNL1P36915 607 aaPredicted RBP13.02□□□□□ -0.33
DDX11-211ENST00000538345 RAP1GAPP47736 663 aa13.02□□□□□ -0.33
DDX11-211ENST00000538345 CDH8P55286 799 aa13.02□□□□□ -0.33
DDX11-211ENST00000538345 NCOA4Q13772 614 aa13.02□□□□□ -0.33
DDX11-211ENST00000538345 UBXN2BQ14CS0 331 aa13.02□□□□□ -0.33
DDX11-211ENST00000538345 ANGPT1Q15389 498 aa13.02□□□□□ -0.33
DDX11-211ENST00000538345 NFIL3Q16649 462 aa13.02□□□□□ -0.33
DDX11-211ENST00000538345 ZNF699Q32M78 642 aa13.02□□□□□ -0.33
DDX11-211ENST00000538345 ZACNQ401N2 412 aa13.02□□□□□ -0.33
DDX11-211ENST00000538345 MDH1BQ5I0G3 518 aa13.02□□□□□ -0.33
DDX11-211ENST00000538345 SCARA5Q6ZMJ2 495 aa13.02□□□□□ -0.33
DDX11-211ENST00000538345 SCN4BQ8IWT1 228 aa13.02□□□□□ -0.33
DDX11-211ENST00000538345 OR6B3Q8NGW1 331 aa13.02□□□□□ -0.33
DDX11-211ENST00000538345 TMC2Q8TDI7 906 aa13.02□□□□□ -0.33
DDX11-211ENST00000538345 ATOH1Q92858 354 aaPredicted RBP13.02□□□□□ -0.33
DDX11-211ENST00000538345 PCED1BQ96HM7 432 aa13.02□□□□□ -0.33
DDX11-211ENST00000538345 SHDQ96IW2 340 aa13.02□□□□□ -0.33
DDX11-211ENST00000538345 GCNAQ96QF7 691 aa13.02□□□□□ -0.33
DDX11-211ENST00000538345 SDCBP2Q9H190 292 aa13.02□□□□□ -0.33
DDX11-211ENST00000538345 SNX25Q9H3E2 840 aa13.02□□□□□ -0.33
DDX11-211ENST00000538345 TASP1Q9H6P5 420 aa13.02□□□□□ -0.33
DDX11-211ENST00000538345 LTB4R2Q9NPC1 389 aa13.02□□□□□ -0.33
DDX11-211ENST00000538345 TMEM30AQ9NV96 361 aa13.02□□□□□ -0.33
DDX11-211ENST00000538345 PTPRZ1P23471 2315 aaPredicted RBP13.01□□□□□ -0.33
DDX11-211ENST00000538345 GVINP1Q7Z2Y8 2422 aa13.01□□□□□ -0.33
DDX11-211ENST00000538345 ZNF292O60281 2723 aa13.01□□□□□ -0.33
DDX11-211ENST00000538345 GOLGA6L4A6NEF3 574 aa13.01□□□□□ -0.33
DDX11-211ENST00000538345 KIF20AO95235 890 aa13.01□□□□□ -0.33
DDX11-211ENST00000538345 MAGEA11P43364 429 aa13.01□□□□□ -0.33
DDX11-211ENST00000538345 AP3M2P53677 418 aa13.01□□□□□ -0.33
DDX11-211ENST00000538345 CACNA2D1P54289 1103 aa13.01□□□□□ -0.33
DDX11-211ENST00000538345 RPL10AP62906 217 aaKnown RBP13.01□□□□□ -0.33
DDX11-211ENST00000538345 CYP27A1Q02318 531 aa13.01□□□□□ -0.33
DDX11-211ENST00000538345 FAM160A1Q05DH4 1040 aa13.01□□□□□ -0.33
DDX11-211ENST00000538345 FCHO2Q0JRZ9 810 aa13.01□□□□□ -0.33
DDX11-211ENST00000538345 TXNDC8Q6A555 127 aa13.01□□□□□ -0.33
DDX11-211ENST00000538345 SPOPLQ6IQ16 392 aa13.01□□□□□ -0.33
DDX11-211ENST00000538345 C4orf50Q6ZRC1 276 aa13.01□□□□□ -0.33
DDX11-211ENST00000538345 SV2AQ7L0J3 742 aa13.01□□□□□ -0.33
DDX11-211ENST00000538345 MAB21L3Q8N8X9 362 aa13.01□□□□□ -0.33
DDX11-211ENST00000538345 RIN3Q8TB24 985 aa13.01□□□□□ -0.33
DDX11-211ENST00000538345 MYCBPAPQ8TBZ2 947 aa13.01□□□□□ -0.33
DDX11-211ENST00000538345 IRF7Q92985 503 aa13.01□□□□□ -0.33
DDX11-211ENST00000538345 EEF2KMTQ96G04 330 aa13.01□□□□□ -0.33
DDX11-211ENST00000538345 TRMT2BQ96GJ1 504 aaKnown RBP13.01□□□□□ -0.33
DDX11-211ENST00000538345 ZFYVE19Q96K21 471 aa13.01□□□□□ -0.33
DDX11-211ENST00000538345 MAGEC2Q9UBF1 373 aaPredicted RBP13.01□□□□□ -0.33
DDX11-211ENST00000538345 CCL26Q9Y258 94 aa13.01□□□□□ -0.33
DDX11-211ENST00000538345 FRMD4BQ9Y2L6 1034 aa13.01□□□□□ -0.33
DDX11-211ENST00000538345 EP300Q09472 2414 aaPredicted RBP13□□□□□ -0.33
DDX11-211ENST00000538345 FAM170BA6NMN3 283 aa13□□□□□ -0.33
DDX11-211ENST00000538345 A8MXQ7 604 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms